Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112395627
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Entry
112395627 CDS
T08872
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nasi04131
]
112395627 (VPS13A)
Membrane trafficking [BR:
nasi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112395627 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
DUF5764
Motif
Other DBs
NCBI-GeneID:
112395627
NCBI-ProteinID:
XP_024594717
UniProt:
A0A341AZC4
LinkDB
All DBs
Position
Unknown
AA seq
3174 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDKSQLNLGIWAGAVALKNLEIKENALSQLDVPFKIKVG
HIGNLSLLIPWKNLYTQPVEALLEDIYLLIVPSSRIKYDPLKEEKQLFEAKQQELKRIEE
AKRKVADQEKHRVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDVTNRDNPLSFGISLQ
NLSMQTTDQYWIPCLHDETEKLFRKLILLDNLFAYWNVKSQMFYLSNYDESLDSLRNGIV
DESIIPKGYDFVFRPISANAKLQMNRGLDFDFSAPKISLDIELHDITIELNKPQYFSLME
LLESVDMMTQNLPYRKFKPDVPLHYHAKEWWVYAICGILEVNVRPHLRMWSWKHIREHRQ
KMKQYKELYKKKLTSKKPSGELLNSLEELEKTLDVFNITIARQQAEVEVKKAGYRIFREG
AQESEDNKGWFSWLWTWSESYTKQQPDLKPGSLEEMLTPEEKTLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIILREKQQKSELLDIVVEEFSTLIVQRPGAQAVKFETKIGSFH
ITGLPDNSTKPRLLSSLDDAASLLRIIFEINPLDETVAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTAAGLLYIIETQKVLDLKINLKASYIIIPQD
GIFNPTSNLLLLDLGHLKVTSKIRSELPDLKQGGAKLEEIMHRAYDSFDIQLTSIQLLYS
RVGDNWKEARKLNVSTQHILVPMHFNVELSKAMVFMDIRMPKFKIFGNLPLVSLRISDKK
LQGILELIESIPKPPPATEVNVPVKPLQIQRSTSLGTSQISQKKFSPLEIPCVEDDSDEE
FFDAPCSPLEEPLQPPSRIKSPQQEKLQKPDCSKNMTEYKIRFEVPEVLIQFCHLVGDCE
LPVVEINVLGLGTVIELRTFDLKANAFLKEVCLKCPEYFDENKKPVYLITTLDNTMEDLL
TLEYVKAEKNLPITTLKDTYNNVVQLIKVNFSSLDIHLHTEALLNTINYFNNILPYSEEK
PAPVHIAETEDKGEFIKKIPLKLSKSEDIITLQILAELSCLQIFIQDQKHNISEIKIEGL
DSEMIMRPSVTEVNAKLRNIIVLDSDVAAVYKKAVYITGKEVFSFRIVSYMGATAGSAYT
DMNVFDSQVNLTVGCIEVVLVTKFLYSVLAFIDNFQAAKQALAEATVQAAEMAATGVKEL
AQRSSRMALDVDIKAPVVVIPQSPVSENVFVADFGLITMKNTFHVITESQINPPPIIDLI
TIKLSEMRLYRSQFINDAYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPME
FILSQEDITTIFKTLYGNIWYEESDSASCGVIKDQSSVTSGATNASHHSGGTTVVTAAVV
EVHSHASQVKTTLNMSFRTDYLTMVLYSPGPKQTSFTDIRDPSLKLAEFKLENIISTLKM
CTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIRYRRVRDGWVADLV
LQEMYICASVEFLLTVANVFLEAYTTGTAVETSVQTWTAKEEALVQQSEKWEINIIIKNP
EIVFVADMTRNDAPALVITTQCEICWQGDFENNTMTAAIKDLQVRACPFLPVKRKGKITT
VLQPCDLFYQATQIRTDPQVIELSVKSLTLKVSPVIINTVITITSALYTAKETIPQETAS
STAHLWEKKDTKNLKMWFLEEPNEVEKIASPTELVPKGEIIRMNIDSIFLVLGAGIGHRT
VPMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWN
LGIKMKKKAKKAIVDSSTEEENYKVPEYKTVITFHSKDQLNITLSKCGLVMLNNLVKAFT
EAATGSSAAFIRDLAPFMILNSLGLSISVSPSDSFSVLSVPMAKSYVLKNEESLSMDYIR
TKDNDHFNAMTSLSSKFFFILLTPANHSTADKIPLTKVGQRLYTVRHRESGVERSIVCQI
DAVEGSKKVTIRSPVQIRNHFSIPLYVYGGDTLLGTASPGSEFNIPLASYRSLLSLKPVD
EDYQMCEGIDFEEIIKNDGTFLKKKCRSINPSKKPFIINIVPEKDNLTSLSVYSEDGWDL
PYIMHLWPPILLRNFLPYKIAYYIEGTEHRVFTLHEGHSAQICTVQLDKARLHLKLLDYL
NHDWKSEYHIKPNQQDISFISFTCVTEIEKTDLDIAIHVTYNTGQTVMAFHSPYWMVNKT
GRMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHG
AVKCKGLKMEYQVGVTIDLSSFNITRIVTFTPFFLLKNKSKYRISVAEEGSDKWLSLDLE
QCIPFWPEDASNKLLIQVERSEGSPKKIHFNKQESCILLHLDNELGGIIAEVNLAEHSTV
ITFSDYRDGAAPFLLINHTKNDIVQYKQSSLCEIEDSLPPGKAILYTWADPVGSRKLKWR
CGESHGEVTQKDDMMTPINLEEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAE
QEIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEF
KEYTESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQS
SFRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVCIVMRSAGHSQISRI
KYFKVLIQEMDLRLDLGFVYAISELMTAAEVTEKTEVELFHKDTEAFQEEYKIVSLGDSS
QVSLYEYFHISPIKLHLSVSLSSGGEEAKDSEQPEGLVAVHSLNLLLKSIGATLTDVQDV
VFKLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVE
AFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDY
QQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGFGKG
LVGAVTRPTGGIIDMASSTFQGIKRATETSNEVESLRPPRFFNEDGVIRPYRLRDGTGNQ
MLQVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEP
FIVHERRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILRKLEEAREPSPSL
NT seq
9525 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacaagtcccagctcaatctgggcatctgggcaggagctgtagccctgaagaat
cttgaaattaaagaaaatgccctgagtcaactggatgtaccgtttaaaattaaagttggc
catataggtaatcttagtcttctaattccatggaaaaacctttatacccaaccagttgaa
gctctattggaagacatttatttactcatagtgccttcttctagaataaaatatgatcct
ttaaaagaagaaaaacaactctttgaagcaaagcaacaggaactgaaaaggatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacatcgggtggagaaacaggacacttttaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgctatgaagatgatgtcacaaatcgagacaacccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaatactggattccatgtttacatgatgaaactgag
aaactatttcgtaagttaatcctattggataacctttttgcctattggaatgtgaagtct
cagatgttttatcttagtaattatgatgaatcattggacagcctgaggaatggtattgtt
gatgaaagtattattccaaaaggttatgattttgtatttcgccccatatctgctaatgcc
aaacttcagatgaatcgcggattggattttgacttttctgcccccaaaataagcctggat
attgagttacatgacataacaattgaacttaataaaccacagtatttcagtcttatggaa
cttcttgaatcggttgatatgatgacgcaaaatctaccatataggaaattcaaacctgat
gtacctctccactaccatgccaaagaatggtgggtttatgctatatgtggtattcttgaa
gtaaatgttcggccccacttacggatgtggtcatggaagcatataagagaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagctaacaagtaagaagccatctggt
gaacttctcaactctttggaggagttggaaaagactttggatgtatttaatataactata
gcaagacaacaggcagaagttgaggtaaagaaagctggatacaggattttcagagaagga
gcacaagagtcagaggataataaaggatggtttagctggctgtggacttggtcagaatca
tatactaaacaacaaccagatcttaaacctggaagtcttgaagaaatgttgacacctgaa
gaaaaaactttactatatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatgaagttttttgttcacttgaaaagtatgtctattattcta
agagaaaaacaacaaaaatctgaactgttagatattgtagtggaagaatttagcactttg
attgtgcaaagaccaggagcacaagcagttaaattcgaaaccaaaataggttcatttcat
attactggcttaccagataattcaacaaaaccccgcctcctgtcttcattggatgatgct
gcatcactcttgcgaattatatttgagataaatccattagatgaaactgttgctcaaagg
tgtatcatagaagctgaacctttagaaatgctatatgatgcaagaacagtaaatagtata
gtggaattcttcagacctccaaaagaggtaaatctagcacagctgacttcagtgactttg
acaaaacttgaagaatttcgtgataagacagcagcaggtctgctgtatattattgagaca
cagaaagttcttgatctcaaaattaatttgaaggcttcatatattattatcccacaagat
ggaatttttaaccctacatcaaatctgcttcttttggatcttggtcatctaaaggtgaca
agtaaaattcgttcagaattaccagatttaaaacaaggtggggcgaaacttgaagagata
atgcatagagcttatgattcctttgatattcagcttacaagcatacagctgctttatagc
agagttggtgataattggaaagaagcacgaaaactcaatgtatccacacagcatatcttg
gtacctatgcacttcaatgtggaactctctaaggccatggttttcatggatataaggatg
cccaaattcaagatttttggaaacttaccactggtttctttacgaatctcagataaaaaa
ctgcaagggatattggaattgattgaaagcatcccaaaacccccacctgcaactgaagta
aatgtccctgtcaaaccacttcagattcaaagatccacttctttgggaacatcacagatt
tcacagaaaaagttttctcctttggaaattccatgtgttgaagatgattcagatgaggag
ttttttgatgccccatgtagtcccttggaagagcctcttcaacctccatctagaattaaa
agtcctcaacaagaaaagcttcaaaagccagattgttcaaaaaatatgactgaatataaa
ataagatttgaagtgccagaggttttgattcaattctgtcaccttgttggagattgtgaa
ctacctgtggtagaaattaatgtcttgggattgggcacagtcattgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagaggtctgcttaaaatgcccagaatattttgat
gaaaacaagaaaccagtttatttgattacaacactggataacacaatggaagatctgtta
acactggaatatgtgaaggctgaaaagaatttacccataacaacgttgaaggacacctat
aacaatgttgtgcaactgattaaggtgaatttttcctctttggatattcatttacatact
gaagcacttctgaatacaataaattattttaataatatccttccatattcggaggaaaaa
ccagccccagtgcatattgcagagactgaagacaaaggagagtttattaaaaaaatacct
ttaaaactatccaagagtgaagatattattaccttacagattttagcagaattatcatgt
ttacagatctttattcaagatcagaaacacaacatttcagaaattaagattgaagggctt
gattctgagatgattatgaggccatcagtgactgaagtaaatgcaaagctaaggaatata
attgttctggattctgatgtagcagctgtatacaaaaaggctgtttatattactggaaaa
gaagttttcagcttcagaatcgtttcttatatgggtgcaactgctggttctgcgtacaca
gacatgaatgtgtttgacagtcaagttaatttaactgttggttgcattgaagtagttctt
gtcacaaaatttctgtattctgtattggcttttatagataattttcaagcagctaaacaa
gccttggcagaggcaactgttcaggcagcagaaatggctgctactggtgtaaaagaactg
gcacaaaggagttctagaatggcattggatgttgacatcaaagccccagttgtggttatc
ccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaaa
aatacattccatgtgataacagagagtcagatcaaccccccacccattattgatttgata
acgataaagctgagtgaaatgcgactatacaggtctcaatttattaatgatgcataccag
gaagtactggatctactattgccactaaatcttgaggtgattgttgagcgaaatttatcc
tgggagtggtaccaggaagttccttgttttaacgtaaatgctcaactaaagcccatggag
ttcattcttagtcaagaagatataacaactatttttaaaacattatacggcaacatatgg
tatgaagaaagtgatagtgcctcatgtggagtaataaaagatcagtctagtgttactagt
ggtgctactaatgcttcacaccattcaggaggaacaactgtagtgacagctgctgtggta
gaagtacattcacatgcttcccaagttaagacaacactaaatatgagtttcagaactgat
tatctcaccatggtactgtatagtccaggtcctaaacagacttcatttacagatattcgt
gatccttctctgaaacttgctgaatttaagttggagaatattataagtactttaaaaatg
tgtacagatgactcaacattttcttccttctcattaaaaaactgtattttagatgacaaa
aggcctcatgtcaagaaagcaactcctagaatgataggactaacagttgggtttgacaaa
aaggacatgatggatataaggtataggagagtcagagacggttgggtggctgatttagtc
cttcaagaaatgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtcttt
cttgaggcctacactacaggcactgctgtagaaaccagtgttcaaacatggactgctaaa
gaagaagcacttgtacagcaatcagagaagtgggaaattaatattattattaaaaatcct
gaaattgtgtttgtggctgatatgacaagaaatgatgcccctgccttagtcattacaaca
caatgtgagatttgttggcaaggtgactttgaaaataatacaatgaccgctgccattaaa
gatctccaagtgagagcatgcccatttcttccagtcaagagaaaaggaaaaatcactact
gttttgcagccttgtgacttgttctatcaagctactcagatacgtacagatccacaagtg
attgaattatcagtaaaatccctgacactgaaggtttcaccagttattataaacactgtg
attaccataacttcagcactttatacagctaaggaaaccatcccacaagaaactgcttct
tctacagcacatttatgggaaaagaaggatacaaagaatttaaaaatgtggtttcttgaa
gaaccaaatgaagttgaaaaaatagcttccccaactgaattggtacccaaaggagagata
ataagaatgaacattgattctatttttctagttcttggggctggaattggtcatcgaaca
gtacctatgcttttggcaaagtcacgtttctcaggggaaggcaaaaactggagttcccta
ataaatctccactgtcagcttgagctagaagtacattattacaatgaaatgtttggtgtg
tgggaacctttgcttgaacccttagaaattgatcagactgaggattttagaccatggaat
cttggaatcaagatgaaaaagaaagccaaaaaggccattgttgactcaagtacagaagaa
gaaaattacaaggtaccagaatataaaactgtcatcactttccattcaaaagaccaacta
aacattacattatccaaatgtggccttgtaatgttaaataatttagtcaaggcatttaca
gaagctgccactggatcttcagctgccttcataagggatctagcaccatttatgatttta
aattctcttggacttagtatctctgtttcaccaagtgactcttttagtgtgctcagcgta
cctatggcaaaatcatatgtattgaaaaatgaggagagtttaagtatggattatatacga
actaaagacaatgatcatttcaatgcaatgaccagcctaagcagcaaattcttcttcatt
cttcttacacctgctaaccactctactgctgataaaatccctttaacaaaagtgggacaa
cgactgtacactgtaagacacagagagtctggagttgaaagatctattgtttgtcaaatt
gatgcagtggaaggaagtaagaaggtaacaattcgctccccagtgcagattagaaatcat
ttttcaataccactttatgtttatggaggggacaccttattgggaacggcttcacctgga
agtgaatttaacataccattagcatcttaccgatcactcctttccctgaagccagtagat
gaggactatcaaatgtgtgaaggaattgattttgaagaaattataaaaaatgatggcact
tttctcaagaagaaatgtagatctataaacccttccaagaagccatttatcattaatatt
gtcccagaaaaagataatttgacatctttgtcagtgtattcagaagatggttgggactta
ccatatataatgcatttgtggccacctattctactccgaaattttcttccttacaaaatt
gcttattatatagagggcaccgaacatagagtttttactctacatgaaggccattcagcc
cagatttgtactgtacagttggataaagccaggctgcatttaaaattacttgactatctt
aatcatgattggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatc
agttttacttgtgttacagaaatagaaaagactgatttagatattgctatccatgtaact
tataatactggccagacggttatggcatttcacagtccttactggatggtcaataaaact
ggtcgaatgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaa
aagccagttctcttttcttttcagccaaagcacttttttaataacaataaggttcagctt
atggtaactgatagtgaattgtcagatcagttttcaattgatactgttggtagtcacgga
gctgttaaatgtaagggcctgaaaatggaatatcaagttggtgtcactatagatcttagc
agttttaacattaccagaattgtcacctttacacccttttttttgcttaaaaacaaaagt
aaatatcgtatatcagtggctgaagagggaagtgataaatggctctctcttgatttggag
cagtgtatccccttttggcctgaggatgcttctaataaacttcttattcaagttgaaaga
agtgaaggctctcccaaaaagatacattttaacaagcaagaaagttgtattttattgcat
ctggataatgagcttggaggtattatagcagaagttaatttggctgagcattctacagtt
attacattttcagattatcgtgatggagcagctccattcctgttaataaatcacaccaag
aatgacattgttcaatataagcaaagttccctctgtgaaatagaagattccctccctcct
ggaaaagcaattctttacacgtgggctgatccagtgggctctagaaagctgaagtggaga
tgtggagaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatctg
gaggaaaagaccatttatttagtttcattctttgaaggcttacaacgcattattttattc
actgaagatccaagggtatttaaagtgacatatgaaagtgagaaagcagagttagcagag
caagaaattgtgttggcattacaagatgttggaatttctcttgtcaacaattatacaaag
caagaagtagcctatattggcattacaagttctgatgtggtttgggagacaaaacccaag
aagaaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagaaagaattt
aaggaatatactgaatcttcaccatcagaagataaggttattgagttggacactaacatt
ccggttcgcttcacacctagtggtactaacatgaaaattctgcagccacatgtaatagct
ataagaagaaattaccttccagcgttaaaagtagaatatagcacatctgcacatcaatca
tcatttagaattcaaatttacagaatacagatccaaaaccagatacacggtgctatattt
ccatttgtattttaccccattaaacctcctaagtcggtcaccatggattcagcaccaaag
ccctttacagatgtctgtattgtcatgagatctgcaggacattcgcagatatcacgtatt
aagtatttcaaagtgttgatccaagaaatggatctcaggttagatcttgggtttgtctat
gctatatcagaacttatgacagcagctgaagtaactgaaaaaacggaggttgagcttttt
cataaagatacagaagctttccaagaagaatataaaatagtttcattaggagattcatca
caagtcagtctctatgaatactttcatatatctcctatcaagttgcatttaagtgtttca
ctgagttcaggtggtgaagaagctaaagattcagaacaacctgaaggactggtagcagtt
cattctttaaatcttttgctgaagagtattggtgccactcttacagatgtacaagatgta
gtttttaagcttgcattttttgaactcaactatcagttccatacaacatctgaactacag
tctgaagtaataagacactattcaaaacaggccattaagcagatgtatgtactcattctt
ggacttgatgttttgggaaatccctttggcttgattagagaattttctgaaggtgtagaa
gcatttttttatgagccttaccagggagccatccagggtcctgaagagtttgtggaagga
atggcactgggactgaaagcactagttggtggagctgttggtggattagctggtgctgcc
tccaaaatcaccagtgctatggctaaaggggtagcagctatgactatggatgaagactac
caacagaagagaagagaagccatgaacaagcaaccagctggtcttagagaaggcatcact
cgtggaggaaaaggattagtttctggttttgtaagtggcataacaggaattgttacaaaa
ccgatcaaaggagctcaaaaagaaggagcggctggtttctttaaaggttttgggaaaggt
ttagttggagcagtgacaaggccaactggaggcatcatagacatggctagcagtacattt
cagggaataaaaagagctacagagacttctaatgaagtggagagtctgcgaccccctagg
ttctttaatgaagatggagttatcagaccttacaggttgagggatggtactggaaatcaa
atgttacaggtcatggaaaatggaagatttgcaaaatacaaatattttacccatgtcatg
atcaataaaacagacatgttaatgataaccaaaagtggtgtattgtttgtaacaaaagga
acgtttggacagcttacctgtgagtggcagtatagttttgatgagtttaccaaagagcca
ttcattgttcatgagagaaggttgcgcattgaagcaaaggagcgggtgaagtctgtattc
catgccaaagagtttggaaaaataattaacttcaagactccagaggatgcaaggtggatc
ctcagaaagctagaagaagcaagagaaccttccccgagcctctga
DBGET
integrated database retrieval system
