Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112395818
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Entry
112395818 CDS
T08872
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4B-like
KO
K10609
cullin 4
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03420
Nucleotide excision repair
nasi04120
Ubiquitin mediated proteolysis
nasi05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112395818
09124 Replication and repair
03420 Nucleotide excision repair
112395818
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
112395818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112395818
03400 DNA repair and recombination proteins [BR:
nasi03400
]
112395818
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nasi04147
]
112395818
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
112395818
DNA repair and recombination proteins [BR:
nasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112395818
TCR (transcription coupled repair) factors
Cul4-CSA complex
112395818
Exosome [BR:
nasi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112395818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
CCDC85
HAT_PRP39_N
OSCP
RMI1_N_N
MarR_2
Motif
Other DBs
NCBI-GeneID:
112395818
NCBI-ProteinID:
XP_024594991
UniProt:
A0A341AWW4
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MIMISSSFLFLDRTYVLQNSMLPGFPGGAVVGGLPADAGDMEATAVGGPRTKKKKKKKNS
MLPSIWKRNSEAIDRSLLRSLLSMLSDLQIYQDYFEQRFLEGTNRFYAAEGQKLMQEREV
PEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTEILQKDLNKLLDKNRI
QDLSHLYQLFSKVRGGIQVLLQQWIEYIKAFGSTIVVNPEKDKTMVQELLAFKDKVDHII
DICFLKNEKHINAMKEAFETFINKRPNKPAELIAKYADSKLLAGNKEATDEELEKMLDKI
IIFIYFSPMIIFRFIYGKDVFEAFYKKDLAKXPVGKSASVDAEKSMLSKLKHECGAAFTS
KLEGTFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTVGHWPTYVPMEVHLPPEVVK
FPEIFKTFYLGKHSGRKPQWQSTLGRCVLKAEFKEGKKELQFSLLQTPVLLMFNEGEELS
LEEIRQATGIEAGELGRTLQSLACGKARVLMTNPKGKAIEDGDKFICNDDFKHKLFRIKV
NQIQMKEMVEEQASTTERRVYRDXYEMDAAIVQIMKIRKTLSHNLLVSEVYNQLKFPVKP
ADLKKRRESLTDLDYMERDKENPNQYNYIA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgatcagtagcagttttttgtttctggataggacttacgttcttcaaaattca
atgctgccgggcttccctggtggcgcagtggttgggggtctgcctgccgatgcaggggac
atggaggccacagcagtgggaggcccgcgtacaaaaaaaaaaaaaaaaaaaaaaaattca
atgctaccttccatttggaaaaggaatagtgaagcaattgatagaagtttactccgaagc
cttttaagcatgctctctgatttgcaaatttatcaggattattttgaacaacgatttttg
gaaggaactaaccgattctacgcagctgaaggccaaaaattaatgcaggaaagagaggtt
cctgaatatcttcatcatgttaacaaacgtctagaagaagaagcagacagacttattact
tacttagatcagaccacccaaaagtcattaattgctactgtggaaaaacaacttctaggt
gaacacttaacagagattcttcagaaagatttaaataaactccttgataaaaaccgaatt
caagatttatctcacctgtatcagctcttcagtaaagttcgaggtggcattcaggttctc
ttacagcaatggattgaatacattaaggcatttggtagcactattgtagttaatcctgaa
aaggataaaaccatggttcaagaattgctggcttttaaagataaggttgaccatataatt
gatatctgtttcctgaagaatgaaaaacatatcaatgccatgaaagaagcatttgaaaca
ttcattaacaaaagaccaaacaaacctgctgaacttatagctaagtatgcagattcaaag
cttctcgcaggcaacaaagaagctacagatgaagaacttgagaaaatgttggataagatt
attatatttatttatttttcccctatgattatatttagattcatctatggcaaggatgtt
tttgaggccttctataagaaagatttagccaagntgcctgttgggaagagtgcatctgtg
gatgctgaaaaatcaatgctgtccaaacttaaacatgaatgtggagctgctttcaccagc
aaacttgaaggaacgtttaaagacatggaactttctaaagacatcatgattcaattcaaa
cagtatatgcagaaccagaatgtacctgggaatattgaattaactgtgaatatcctgacg
gtgggtcattggccaacatatgtgcctatggaagttcatttaccaccagaggtggtaaaa
tttccggagattttcaagaccttttacctaggcaaacatagtggcaggaaacctcagtgg
cagtcaaccctaggacgctgtgtgctaaaggcagaatttaaagagggtaaaaaggaactc
cagttctctcttttgcaaacaccggtgctgctgatgttcaatgagggagaggagttaagt
ttggaagagatcaggcaggctacgggaatagaggctggagagttagggagaaccctgcag
tcattggcctgtggcaaagctagagttctgatgacaaatccaaagggtaaagctatagaa
gatggtgacaagttcatttgtaatgacgatttcaagcacaaacttttcaggataaaggtc
aatcaaattcagatgaaagaaatggttgaggaacaagcaagcactacagaaagaagagta
tatcgggacnagtatgaaatggatgctgcaattgttcaaattatgaagataagaaagacg
cttagccacaaccttcttgtttcggaagtgtacaaccagttgaaatttcccgtaaagcct
gctgatcttaagaagagaagagaatccttaactgacctggactacatggaaagagataaa
gaaaatccaaaccagtacaactatattgcataa
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