Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396028
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Entry
112396028 CDS
T08872
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nasi04131
]
112396028 (MYOF)
Membrane trafficking [BR:
nasi04131
]
Endosome - Lysosome transport
Others
Ferlins
112396028 (MYOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
NagJ_C
Motif
Other DBs
NCBI-GeneID:
112396028
NCBI-ProteinID:
XP_024595280
UniProt:
A0A341AXQ6
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLD
FSSSLGIVVKDFETIGQNKLIGTATVALKDLIGNQSRSLPYKLISLLNERGQETGATIDL
VIGYDPPSAPHPDDPSGTSVPGLGGEEEEGGGDEDGLDSTVRGPGPRGPGRMVSEAHLAR
RLTKGKNSRWMLSNKPQDFQIRVWVIEGRQLSGNNIKPVVKVHICGQTHRTRIKRGNNPF
FDELFFYNVHLTPSELMDEVISIRVYNSHSLRADCLMGEFKIDVGFIYDEPGHAVMRKWL
LLNDPEDTSSGAKGYVKVSMLVLGTGDEPPPEIQDRGNDSDDVESNLLLPAGIALRWVTF
LLKIYRAEDIPQMDDAFSQTVKEIFGGSADKKNLVDPFVEVSFAGKKVCTNIIEKNANPE
WNQVVNLQIKFPSVCEKIKLTIYDWDRLTKNDVIGTTYLHLSKIAASGGEVEDFSSSGSG
AASYTANTGETEVGFIPTFGPCYLNLYGSPREYTGFPDPYDELNTGKGEGVAYRGRILVE
LSTLLEKTPPDKKLEPISNDDLLVVEKYQRRRKYSLSAVFHSATMLQDVGEAIQFEVSIG
NYGNKFDTTCKPLASSTQYSRAVFDGNYYYYLPWAHTKPVVTLTSYWEDISHRLDAVNML
LVMAERLQSKIEALKSGIQGKIPANQLAEMWLKLIDEVIEDTRYTLPLMEGKPNVTVLDN
HIQKLRSRALSQIHEAAVRMRSEATEVKPTLAEIEDWLDKLMQLTEEPQNSMPDIIIWMI
RGEKRLAYARIPAHQVLYSTSGDNASGKYCGKTQTIFLKYPQEKNNGPKVPVELRVNIWL
GLSAVEKKFNSFAEGTFTVFAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKREFFL
PPKGWEWEGDWIVDPEKSLLTEADAGHTEFTDELYQNESRYPRGEWKPAEDTYTDANGDK
AASPSELTCPPGWEWEDDAWVYDINRAVDERGWEYGIIIPPDNKPKSWVAAEKMYHTRRR
RRLVRKRKKDLTQTTSSTAKAMEELKDQEGWEYASLIGWKFHWKQHSSDTFRRRCWRRKM
APSETHGAAAIFKLEGALGADTTEDGDEKSVEKQKHSATAVFGANTPIVSCNFDRVYVYH
LRCYIYQARNLMALDKDSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTIIFDEIEIYGE
PQTVLQNPPKVVIELFDNDQVGKDEFLGRSMCSPLVKLNSEMDVTPKLLWYPVMNGDKTC
GDVLVTAELILRHKDGSNLPILPSQRAPSLYMVPQGIRPVVQLTAVEILAWGLRNMKNYQ
MASVTSPSLIVECGGERVESVVIKNLKKTPNFPSSVLFMKVFLPKEELYMPPLVIKVIDH
RQFGRKPVVGQCTIDCLDRFRCDPYAGKEDIVPQLKASFLSTPPCRDVVIEIEDTKPLLA
SKCLSSMSTALSKMASPATVHLTEKEEEIIDWWSKYYASTGEHEKCGQYIQKGYPKLQIY
DCELEDVMEFEGLTDFSDTFKLYRGKSDENEDPSVVGEFKGSFRIYPLSDDPSVPAPPRQ
FRELPDSVPQECTVRIYIVRGLELQPQDNNGLCDPYIKITLGKKVMEDRDHYIPNTLNPV
FGRMYELSCYLPQEKDLKISVYDYDTFTSDEKVGETIIDLENRFLSRFGSHCGIPEQYCV
SGVNTWRDQLKPTQLLQNVARFKGFPPPVLSEDGSRIRYGGQDYSLDEFEANKTLHQHLG
APEERLALHILRTQGLVPEHVETRTLHSTFQPNISQGKLQMWVDVFPRSLGPPGPPFNIT
PRKAKKYYLRVIIWNTKDVILDEKSITGEEMSDIYVKGWIPGSEENKQKTDVHYRSLDGE
GNFNWRFVFPFDYLPAEQLCLVAKKEHFWSKDQTEFRVPPKLIIQIWDNDKFSLDDYLGF
LELDLHRSIIPAKSPEKCSLDMIPDLKAVNPLKVKTASLFEQKSMKGWWPCYADKDGSRV
MAGKVEMTLEVLNEKEADERPAGKGRDEPNMNPKLDPPNRPETSFLWFSNPCKTMRFIVW
RRFKWVIVGLLVLLIVLLFVAVLLYSLPNYLSMKIVRPNA
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgggtgattgtagaatctgccagcaatatccctaaaacgaaatttgggaaaccg
gatcctattgtttctgttatttttaaggatgagaaaaagaaaacaaagaaagtcgataat
gaactcaacccagtgtggaatgagattttggagttcgacttgaggggtataccactggac
ttttcatcgtcccttgggattgttgtgaaagattttgagacaattggacaaaataagtta
attggcacggccaccgtagccctgaaagacctgattggcaaccagagccgatcgctgccc
tacaaactgatctccctgctaaacgaaagggggcaagagactggggccaccattgacctg
gtgatcggctatgatccaccttcagctccacatccggatgaccccagtgggaccagcgtg
ccaggcttgggaggagaagaagaggagggtggcggtgatgaagacggcttggacagtacg
gtcaggggcccagggcccagggggccgggacggatggtgtcggaagctcaccttgcccgg
aggctcacaaaagggaagaacagccggtggatgctgtccaacaagccacaggacttccag
atccgtgtctgggtgatcgagggccggcagttaagtggcaacaacatcaagcctgtggtc
aaagtccacatctgtggccagacccaccgaacaagaatcaagagagggaacaatccgttt
tttgatgagttatttttctacaatgtccacctgactccttctgaattgatggatgaggtc
atcagcattcgggtttataactcccattctctgcgggcagattgtctgatgggggaattt
aagattgatgtcggattcatttatgatgaacctggtcatgctgtcatgagaaaatggctt
ctcctcaatgaccctgaagataccagctcgggtgctaaaggctacgtgaaagtcagcatg
ttggtcctgggaaccggagatgagcctccccctgagatacaagatcgtggtaatgacagt
gatgacgtggagagtaacttgttactccctgctggcatcgccctccgatgggtgaccttc
ctgctgaagatctacagagcagaggacatccctcagatggatgatgccttctcacagaca
gtaaaggaaatatttggaggcagtgcagataagaaaaacctagtggatccttttgtagaa
gtttcttttgctggaaaaaaggtttgcacaaatataattgagaaaaatgcaaaccctgag
tggaatcaagttgtcaatcttcagatcaagtttccttcagtgtgtgaaaaaataaaacta
acaatatatgactgggaccgtcttaccaaaaatgatgtcattgggacaacgtatctgcac
ctctctaaaattgctgcctctggtggggaagtggaagatttctcatcttcgggatctggg
gctgcatcatatacagcaaatacaggagaaacagaggtgggctttattccaacttttgga
ccttgttatctgaacctttatggaagccccagagagtacacgggattcccagatccctat
gatgagctaaatactggaaagggggaaggagtggcctacagaggcagaatcttggttgaa
ttaagcactttacttgaaaagacacccccagataagaagcttgagcccatttcaaatgat
gacctgctggttgttgagaaatatcagcgaaggcggaagtacagcctgtctgctgtgttc
cattcggccaccatgttgcaagacgttggcgaggccattcagtttgaagtcagcattggg
aactatggcaacaagtttgacacgacctgtaagcctttggcatcaagcactcagtacagc
cgtgccgtgtttgatgggaactactattactacttgccttgggcccacacaaagccagtt
gtcacactgacctcatactgggaggatattagtcatcgcctggatgcagtgaacatgcta
ctagtcatggcagaacggctgcaatcaaaaatagaggctctaaaatcagggatacaaggt
aaaattcctgcaaaccagttggcagaaatgtggttgaagctgatcgatgaagtaatagaa
gacacaagatacacgttgcctctcatggaaggaaaacctaatgtcacagttcttgataat
cacatccaaaagctgcgatccagagctctctcccagatacacgaggcggctgtgaggatg
aggtctgaggccacagaggtgaagcccacactggcagaaatcgaggactggctcgataaa
ttaatgcaactgactgaagagcctcagaacagcatgcctgacatcatcatctggatgatc
cggggagagaaaagattggcctacgcacgcattcccgcgcatcaggttttatactccacc
agtggtgacaacgcatctgggaaatactgtgggaaaacccaaaccatctttctgaagtac
ccacaggaaaaaaacaatggaccaaaggtgcctgtggagctgcgtgtgaacatctggctg
ggcttaagtgctgttgagaagaagttcaatagcttcgcagaaggaacattcaccgtcttt
gctgaaatgtatgaaaatcaagctcttatgtttggaaaatggggcacttctggattagtg
ggtcgtcataaattttctgatgtcacaggaaaaataaaactcaagagggaattctttttg
cctccaaaaggctgggaatgggaaggagactggatagttgatcctgagaaaagcttgctg
accgaggcggatgcgggtcacacagagttcacagatgaattgtatcagaacgagagtcgc
tacccccggggcgagtggaagccagcagaggacacctacacagatgcgaacggtgataaa
gcagcatcacccagcgagctcacttgccctccaggttgggaatgggaagatgatgcatgg
gtctatgacattaatcgtgcagtggatgagagaggctgggagtatggaattatcattcct
cctgataataagcccaaatcctgggttgcagcagaaaaaatgtatcatactcgtagacgc
cgaaggctggtccgaaaacgcaagaaagatttaacacaaaccacttcaagtactgcaaag
gccatggaagaattgaaagaccaggagggctgggaatacgcttctttaattggctggaaa
tttcactggaaacagcatagttcagatacctttcgccgcagatgctggaggagaaaaatg
gctccttcggagacgcatggcgcagctgccatctttaaacttgaaggtgcccttggtgca
gatactaccgaggatggagatgaaaagagtgtagaaaaacagaaacacagcgccactgct
gtgtttggagcaaacactcccattgtttcctgtaattttgacagagtctacgtttaccat
ctgcgttgctatatctatcaagccagaaacctcatggctctagacaaggatagcttttca
gatccatatgctcatgtctccttccttcatcgaagtaaaaccaccgagatcatccactca
accctgaatcctacttgggaccaaacaattatatttgatgaaattgaaatttatggggaa
ccccaaacagtcctacagaacccacccaaggttgtcattgaactttttgacaatgaccaa
gtgggcaaagatgagtttttaggacgaagcatgtgctctcctctggtgaaactaaactca
gaaatggacgtcacacccaaacttctctggtacccagtaatgaatggagacaaaacctgt
ggggatgtccttgtaactgcagagctgatcctgaggcacaaggatggctccaaccttccc
attcttccctcgcaaagggcaccaagtctgtacatggtcccccagggcatcaggcctgtg
gttcagctcactgctgttgagattctagcttggggcttaagaaatatgaaaaactaccag
atggcttctgtcacctcccccagtctcattgtggagtgcggaggggaaagggtagaatca
gtggtgatcaaaaacctgaagaagacgcccaacttcccaagttctgttctcttcatgaaa
gtgttcttgcccaaggaggaactgtacatgcctccgctggtgatcaaggtcatcgaccac
cggcagtttgggcgcaagcccgttgtgggccagtgcaccattgactgcctggaccgcttt
cgctgcgacccttacgcaggaaaggaggacatcgtgccacagctaaaagcctcctttttg
tctaccccaccctgccgggacgtcgttattgaaatagaagacaccaaaccattactggca
tcaaagtgcttaagcagtatgtcaacagcactcagcaaaatggcttctccagcgacagtg
catctaacagaaaaggaggaagaaattattgactggtggagtaaatattatgcttccaca
ggggaacatgaaaaatgtggacaatatattcagaaaggctatcccaaactccagatatat
gactgtgaactggaggatgtaatggaattcgagggcctgacagacttctcagatactttc
aagctgtatcgaggcaaatcagatgagaatgaagatccttctgtggtaggagagtttaag
ggttccttcagaatctacccactgtcggatgaccccagcgtgccggcccctccccggcag
tttcgggaactacctgacagtgtcccacaggaatgcacggttaggatttacattgttcga
ggcttagagctccagccccaggacaacaatggcctgtgtgacccttatataaaaataaca
ctgggcaaaaaagtaatggaagatcgagaccactacatccccaacactctcaacccggtg
ttcggcagaatgtatgaactgagctgctacttacctcaagagaaagacctgaaaatttct
gtctatgattacgacacctttaccagtgatgaaaaagtaggagaaacgattattgacctg
gaaaaccgattcctttcccggtttgggtcccactgcggcattcctgagcagtactgtgtt
tctggagtcaacacctggcgagatcaactgaaaccaacacagttgcttcaaaatgtagcc
agattcaaaggcttcccaccacctgtcctttctgaagacggaagtagaatcagatatgga
ggacaagactacagcctagatgaatttgaagccaacaaaaccctgcaccaacacctcggg
gcccctgaggagcgccttgcccttcacatccttaggactcaggggctggttcctgaacac
gtggaaacaaggactttgcatagcacctttcagcctaacatctcccagggaaaacttcag
atgtgggtggatgttttccccaggagtttggggccaccaggccctcctttcaatatcaca
ccccggaaagccaagaaatactacctgcgtgtgatcatctggaacaccaaggacgttatc
ctggatgagaaaagcatcacaggagaggaaatgagcgacatctacgttaaaggttggatt
cctggcagtgaagaaaacaaacagaaaacagatgtccactacaggtccttggatggtgaa
gggaattttaactggagatttgtcttcccttttgactaccttccagctgaacagctctgt
ctcgttgctaaaaaagagcatttctggagtaaggaccaaactgaatttcgggtcccaccc
aaactgatcattcagatatgggataatgacaagttttctctggatgactacttgggtttc
ctggaactcgatttgcatcgcagcatcattccagcaaaatcaccagagaaatgcagtttg
gacatgattcctgacctcaaagccgtgaacccccttaaagtgaaaaccgcctctctcttt
gaacagaagtccatgaaaggatggtggccgtgctatgcagataaagatggctcccgtgtg
atggctgggaaagtggagatgacgttggaagtcctcaatgagaaggaggctgacgagagg
ccagccgggaagggacgggatgaacccaacatgaaccccaagctggacccaccaaaccgg
ccggaaacttccttcctctggttcagcaacccatgcaagaccatgaggttcatcgtgtgg
cggcggtttaagtgggtcatcgtcggcctgctggtcctgctgattgtgctgcttttcgtg
gccgtgctcctctactccttaccgaactatctgtcaatgaagattgtgaggccaaatgca
taa
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