Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396051
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Entry
112396051 CDS
T08872
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nasi01002
]
112396051
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112396051
Enzymes [BR:
nasi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112396051
Peptidases and inhibitors [BR:
nasi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112396051
Ubiquitin system [BR:
nasi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112396051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
112396051
NCBI-ProteinID:
XP_024595317
UniProt:
A0A341B159
LinkDB
All DBs
Position
Unknown
AA seq
2556 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPFQNQASSPDSFNENSPPARPDEQGQGDAPPQDE
DEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFR
DGLTISFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPH
CKFHIYNGTRPCESVSTSAQLPEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDRF
TNGSALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIEIVPQFLENLTDEELKKEAKNE
TKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKV
ISSVSYYTHRHGHPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVI
KEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKANWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCS
QDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSSSRFSQTQRSLHV
FYRHDLINQLQHSHALVTLVAENLATYMNSMRLYTRDHEDYDPQTVRLGSRYSHVQEVQE
RLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDIN
KDFFESNVLQLDPFLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWR
VVIQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGD
KDSINCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHG
RQVDDLDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNLK
DKSVITAKLTQVSSNMPSSPDSSSDSSTGSPGNHSNHYSDGPNPEVESCLPGVIMSQHPR
YISFLWQVADLGSNLNMPPLRDGARILMKLMPPDRTTIEKLRAVCLDQAKLGENNLGPSL
DSLFFGPSASRVLYLTEVVYALLMPAGALLADDSSDFQLHFLKSGGLPLVLSMLTRNNFL
PNTDMETRRGAYFSGLKIAKLLLTAIGYGHVRAVAEACQPVVGGADPITPINHITHDQAV
VLQNALQSIPNPSSECMLRNVSIRLAQQISDEASRYMPDICEIRAIQKIIWASGCGTLEL
VFSPNEEITKIYEMTTNTSNGPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKDWQTF
IIDLLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARQRGKHSGDY
FTLLQHLLNYAFNSNINVPNAEVLLNNEIDWLKRIRDNVKNTGETGVEEPILEGHLGVTK
ELLAFLTPEKKYHVGCEKGGANLIKELIDDFIFPASKVYLHCMRSGELPAEQAIPVCSSP
ATISAGFELLVALAVGCVRNLKQIVDCLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKG
FVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGPGSDTDDDMFSDEKQDSESNVDPRD
DVFGYPHQFEDKTALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWG
EPVNLREQHDALEFFNSLVDSLDEALKALGHPAVLSQVLGGSFADQKICQGCPHRYECEE
SFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAI
QLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVSGVEKLEGDDVNPEMQLIQQNEQSEC
ETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGKDGERNRWYKFDDGDVTECKMDDDEE
MKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILLYERMDTIDQDDEMIRYISELTIT
KPYQMSPAIERSVWKQNVQFMHNRMQYSLEYFQFVKKLLTCNGVYLSPAPGQDHLLPEAE
EITMISIQLAARFLFTTGFHTKKIVRGPASDWYDVLCILLRHSKNVRFWFAHNVLFNVSN
RFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSSFTSPGPSSQACDNLSLSDHLLR
AVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPGPPI
KYQYAELGKLYSVVSQLIRCCNVSSRMQSSISGNPPLPSPFGDPNLSQPIMPIQQNVADI
LFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLD
LLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSC
PVAYQILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLE
RSHSARMTLAKACELCPEEEPDDQDAPDEHESSPPEDAPLYPHSSGSHYQQNNHVHGQPY
TGPAAHHLNNHQKTSQRPQENYEGNEEVSSSQMKDQ
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atgacagccactactcgtggctctccagtaggagggaatgacagccagggccaggctcct
gatggacagtctcagccccccttccagaatcaggcctcatcacctgattccttcaatgag
aattccccaccagctcgtccagatgaacaaggtcaaggtgatgctccaccacaggatgaa
gatgaggaacctgcatttccacatactgacctggcaaagttggatgacatgatcaaccgg
cctcgatgggtggttccagttttgccgaaaggggaattagaagtgcttttagaagctgct
attgatcttagtaaaaaaggtctcgatgttaaaagtgaagcatgccaacgttttttcaga
gatgggctaacaatatctttcactaaaatccttatggatgaggcagtgagtggctggaag
tttgaaattcataggtgcattattaacaatacccatcgcctagtggaactttgtgtggcc
aagttgtcccaagactggtttccacttctagaacttcttgccatggccttaaatcctcat
tgcaaattccatatctacaacggtacacgtccatgtgaatcagtttccacgagtgctcaa
ttgcctgaagatgagttatttgctcgttcctcagatcctcgatcaccaaaaggttggcta
gtggatctcatcaataaatttggcacattaaatgggttccagattttgcatgatcgtttt
actaatggatcagcattaaacgttcaaataattgcagcccttattaaaccatttggacaa
tgctatgagtttctcagtcaacatacagtgaaaaagtactttattccaattatagaaata
gttccacaatttttagaaaacttaactgatgaagaactgaaaaaagaagcaaagaatgaa
accaaaaatgatgccctttcaatgattattaaatctctgaagaatttagcttcaaggatt
ccaggacaagaagaaactgtaaaaaatttagaaatttttagactgaaaatgatactcaga
ttattgcagatttcttcttttaatggaaagatgaatgcactgaatgaaattaataaggtg
atatctagtgtatcatactatactcatcgacatggtcatcctgaggaggaagagtggctg
acagctgagcgaatggcagaatggatacagcagaacaatatattatccatagtcttgcga
gatagtcttcatcaacctcagtatgtagagaagctagagaaaattcttcgttttgtgatt
aaagaaaaagctcttacattacaagatcttgataatatctgggcagcacaggcagggaaa
catgaagccattgtgaagaatgtacatgaccttctggcaaagttggcctgggatttttct
cctgagcaacttgatcatcttttcgattgctttaaggcaaattggacaaatgcaagtaaa
aagcaacgtgaaaagctacttgagctgatacgacgtcttgcagaagatgataaagacggt
gtgatggcacacaaagtattgaaccttctttggaatctggctcatagtgatgatgtgcct
gtagacatcatggacctagctctcagtgcccacataaaaatactagattatagttgttcc
caggatcgagacacacaaaagatccagtggatagatcgctttattgaagaacttcgcaca
aatgacaagtgggtaattcctgcactgaaacaaataagagaaatttgtagtttgtttggt
gaagcacctcaaaatttgagttcttctcgttttagtcaaactcagcgaagtctccatgta
ttttatcgtcatgatttaatcaatcaacttcagcacagtcatgccttagttactttggta
gcagaaaaccttgcaacttatatgaatagcatgcgactttatactagagaccatgaagac
tatgacccacaaactgtgaggcttgggagtagatatagtcatgttcaagaagttcaagaa
cggcttaatttccttagatttttactgaaggatggccaactgtggctctgtgctcctcag
gcaaaacaaatatggaaatgcctagcagaaaatgcagtttacctttgtgatcgtgaagcc
tgttttaagtggtattccaagttaatgggggatgaaccagacttagatcctgatattaat
aaggacttctttgaaagtaatgtgcttcagcttgatcctttcctgttaactgaaaatgga
atgaaatgttttgaacgattcttcaaagctgttaactgtcgagaagggaaactagtagca
aaaagaagagcctatatgatggatgatttggagctaataggattagactacctttggagg
gttgtaattcagagtaatgatgatattgcaagcagagctatagatctccttaaagagata
tacacaaaccttggccccaggttacaggtcaatcaggtggttatccatgaagacttcatt
cagtcttgctttgatcgcttgaaagcttcatatgatacattgtgtgttttggatggtgac
aaagacagtattaattgtgcaagacaggaagccattcgaatggttcgagtattaactgtt
ttaagggaatacataaatgaatgtgatagtgattatcatgaggaaagaacaattctacct
atgtcaagagcattccgtggtaaacatctctctcttatagttcgatttccaaaccatggc
agacaggttgatgacttggacatatggtctcatacaaatgatacagttggttcagtaaga
cgatgtattctcaatcgtattaaagcaaatgtagcccatacaaaaattgaactgtttgtg
ggtggtgaattgatagattctgaagatgacagaaagctaattggacaattaaacttaaaa
gataaatcagtaattacagccaaacttacacaagtaagttccaatatgccttccagccct
gatagttcttctgattcctcaactggatctcctggaaaccatagtaatcattacagtgat
ggtcctaatccagaagtggaaagttgtttgcctggagtgataatgtcacagcatcccaga
tatatctctttcctttggcaagttgctgatttaggtagcaatctgaacatgccacctctt
agagatggagcaagaatacttatgaaacttatgccaccagatagaacaacaatagaaaaa
ttaagagctgtttgtttggaccaggcaaaacttggagaaaataaccttggaccatctctt
gattcacttttctttggtccttctgcttcccgagtgctgtacctaacagaggtagtttat
gccttgttaatgcccgctggtgcacttttggcagatgattcctctgactttcaacttcac
ttcttgaaaagtggtggcttaccccttgtgctgagtatgctaacaagaaataacttcctg
cctaatacagatatggagacacgaaggggtgcttacttcagtggtcttaaaatagccaaa
ctcttgttaactgctataggctatggccatgttcgagctgtagcagaggcttgtcaacca
gttgtaggtggtgcagatcccataacaccgattaaccacattactcatgatcaagcagtg
gtgctacaaaatgcccttcagagcattcctaacccatcatctgagtgcatgcttagaaat
gtatcaatacgtcttgctcaacaaatatctgatgaggcttcaagatatatgcctgatatt
tgtgaaattagagctatacaaaaaatcatctgggcatcaggatgtgggacattagagcta
gtatttagcccaaatgaagaaatcactaaaatttatgagatgaccaccaatacaagcaat
gggccagacatggaagatgaacaggtttgctgtgaagcattggaagtgatgacattatgt
tttgctctaattccaacagccctggatgcacttagtaaagaaaaggactggcagacattt
atcattgacttactgttgcactgtcccagcaaaactgttcgtcagttggcacaggagcag
ttttttctaatgtgcaccagatgttgcatgggacacaggcctctgcttttcttcattact
ctgctctttaccatattggggagcacagcacgacagagaggtaaacattcaggtgactat
ttcactcttctacagcaccttcttaattatgctttcaacagtaatattaatgtacccaat
gctgaagttcttctcaacaatgaaattgattggctcaaaagaattagggataatgttaaa
aacacaggtgaaacaggtgttgaagagccgatcttggaaggccaccttggagtaacaaaa
gagttgctggcctttctaacgcctgagaaaaagtatcatgttggttgtgagaaaggaggt
gctaatctcattaaagaattaattgatgatttcatctttcctgcctccaaagtttacctg
cattgtatgagaagtggagaactaccagctgagcaggctatcccagtctgtagttcacca
gctaccatcagtgctgggtttgaactacttgtagcattagctgttggctgtgtaaggaat
ctcaaacagatagtagactgtttgactgaaatgtattacataggcacagcaataactact
tgtgaagcacttactgagtgggaatatctaccacctgttgggccccgcccaccaaaagga
tttgtgggacttaaaaatgctggtgctacttgttacatgaattctgtgatccagcagcta
tacatgattccttccatcaggaacagtattcttgcaatcgaaggaccaggtagtgataca
gatgatgatatgttcagtgatgagaagcaggacagtgagagtaatgttgatccccgagat
gatgtatttggataccctcatcagtttgaagacaaaacagcattaagtaaaacagaagat
aggaaagagtacaatattggtgttttgagacaccttcaggtcatctttggtcatttagct
gcttcccggctgcaatactatgtgcccagaggattttggaaacagttcaggctttggggt
gaacctgttaatcttcgtgaacaacacgatgccttagagttttttaattctttggtggat
agtttagatgaagctttaaaagctttaggacatccagctgtgctaagtcaagtcctggga
ggttcctttgctgatcagaagatttgccaaggctgcccacatagatacgagtgtgaagaa
tcttttacaactctgaatgtagatattagaaatcaccaaaaccttcttgattctttggaa
cagtatatcaaaggagatttattggaaggtgcaaatgcgtatcgttgtgaaaaatgtgat
aaaaaggttgatacagtaaagcggttgctaattaaaaaattgcctcctgttcttgctatt
caattgaaacgatttgactatgactgggaaagagaatgtgcaattaaattcaatgattat
tttgaatttccacgagagctggacatggaaccttacacagtatcaggtgttgaaaagctg
gagggagatgatgtaaacccagagatgcagttgatacaacagaatgagcaatctgaatgt
gagacagcaggtagcacaaaatacagacttgtgggggtgcttgtacacagtggtcaagca
agtggtggacattattattcctacatcattcagaggaatggtaaagatggtgagagaaat
cgctggtataaatttgatgatggagatgtaacagagtgtaaaatggatgatgatgaagaa
atgaaaaatcagtgttttggtggagagtacatgggagaagtatttgatcatatgatgaag
cgcatgtcatacaggaggcagaaaaggtggtggaatgcttatatactcctttatgaacga
atggacacaatagaccaagatgatgaaatgataagatatatatcagagctaactatcaca
aaaccctatcagatgtcaccagccattgagagaagtgtgtggaaacaaaatgtgcagttc
atgcacaaccgaatgcagtacagtttagaatattttcaatttgtgaaaaaactgcttacg
tgtaacggagtttacttaagccctgctccaggacaagatcacttgttgcctgaagcagaa
gaaatcactatgattagtattcagcttgcagctagattcctctttaccactggatttcac
accaagaaaatagttcgtggccctgccagtgattggtatgatgtattgtgcattctactc
cgtcacagcaagaacgtacgtttttggtttgctcataatgtccttttcaatgtttcaaat
cgtttctctgaataccttcttgagtgccctagtgcagaagtgaggggtgcatttgcaaaa
cttatagtatttattgcacatttttctttgcaagatgggccttgtccttcatctttcaca
tctccaggaccttctagtcaggcatgtgataacttaagcttgagcgatcacttactaaga
gcagtattaaatctcctgagaagggaagtttcggaacatggccgtcatttacagcagtat
ttcaatctgtttgtaatgtatgccaatttaggtgtggcagaaaagacacagcttctgaaa
ttgagtgtacctgctacctttatgcttgtgtctttagatgaaggtccaggtcctccaatc
aaatatcagtatgctgaattaggcaagttatactcagtagtgtctcagctgatccgctgt
tgcaatgtctcatcaagaatgcagtcttcaatcagtggtaatccccctcttcccagtcct
tttggtgaccctaatttatcacagcctataatgccaattcagcaaaatgtggcagacatt
ttatttgtgagaacaagttatgtgaagaaaattattgaagactgcagtaactcagaggaa
accatcaaattgcttcggttttgctgctgggagaatcctcagttctcgtctactgtcctc
agtgaacttctctggcaggttgcgtattcatacacctatgaactacggccatatttggat
ctacttctgcagattttactaatagaggattcttggcagactcacagaattcataatgca
cttaaaggaatcccagatgatcgagatgggttattcgatactatccagcgctctaagaat
cactatcaaaaaagagcataccagtgtataaaatgtatggtagctctctttagcagttgt
ccagttgcttaccaaatattacagggtaatggagatcttaaaagaaagtggacctgggca
gtggaatggcttggagatgaacttgaaagacgaccatacactggcaatcctcaatacact
tacaacaattggtctcctccagtgcaaagcaatgaaacatcaaatggttatttcttagag
agatcacatagtgctaggatgacactggcaaaagcttgtgaactctgtccagaagaggag
ccagatgaccaagatgccccagatgagcatgaatcatctccaccagaagatgcgccatta
tatcctcattcatctggatctcactatcaacagaataatcacgtgcatggacagccgtat
acagggccggcagcacatcacttgaacaaccatcagaaaactagccaacgaccacaagaa
aattatgaaggcaatgaagaagtatcctcatctcaaatgaaggatcagtga
DBGET
integrated database retrieval system
