Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396076
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Entry
112396076 CDS
T08872
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04622
RIG-I-like receptor signaling pathway
nasi05161
Hepatitis B
nasi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
112396076
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
112396076
09172 Infectious disease: viral
05161 Hepatitis B
112396076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112396076
03041 Spliceosome [BR:
nasi03041
]
112396076
03036 Chromosome and associated proteins [BR:
nasi03036
]
112396076
Enzymes [BR:
nasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112396076
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112396076
mRNA cycle factors
Common to processing body (P body) and stress granule
112396076
Spliceosome [BR:
nasi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112396076
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112396076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
112396076
NCBI-ProteinID:
XP_024595357
UniProt:
A0A341B0L9
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MSHVPGNERGLDQQFSGLDLNSPDNRSGGGSTASKGRYIPPHLRNREASKGFYDKDSSEW
SCSKDKDAYSSFGSRDSRGKSSYFSDRGSGSKGRFDDRERNDGIGSRGDRTGFGKFERSG
RSRWCHKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFS
DVEMGEIIMGNIELTHYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIY
TDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGG
ADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRR
IVEEDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVE
ESDKRSFLLDLLNATGKNSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEA
LHQFRSGKSPILVATAVAARGLDISNVKHVINFNLPSDIEEYVHRIGRTGRVGNLGLATS
FFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHQYKGSNRGRSKRFSGGFGARDYRQS
SGSGSSSFSSNASSSRSGGGGHGSSRGFGGGGYGGFYSSDGYGGNCSSQGVDWWGN
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtgccgggaaatgagcgcgggctggaccagcagttttctggtctagacctg
aactcccctgataatcggagtggaggaggaagtacagcaagcaaagggcgctatatacct
cctcacttaaggaacagggaagcatctaaaggattttatgataaggacagttcagagtgg
agttgtagtaaagacaaggatgcctacagcagttttgggtctcgagattcaagaggaaag
tccagttacttcagtgatcgaggaagtggatcaaagggaaggtttgatgatcgtgaacgg
aatgatggtattggcagtcgtggtgacagaactggctttggcaaatttgaacgtagtggt
cgcagtcgttggtgtcacaagtcagatgaagacgattggtcaaaaccacttccaccaagt
gaacgcttggagcaggaactcttttctggaggaaacactgggattaactttgagaaatac
gatgacataccagtagaggcaaccggcaataactgtcctccacatattgaaagtttcagt
gatgttgagatgggagaaattatcatgggtaacattgagcttactcattacactcgtcct
actccagtgcaaaaacatgccattcctattattaaaggaaaaagggacttgatggcttgt
gcccaaacagggtctggaaaaactgcggcattccttttgcccatcttgagtcaaatttat
acagatggtccaggcgaggctttgaaggctgtgaaggaaaatggaaggtatggacgtcgt
aaacaatatccaatctccttggttttagccccaactagagaattggctgtacagatctat
gaggaagccagaaaattttcataccggtctcgagttcgtccttgtgtggtatatggtggt
gctgatattggtcagcagattcgagacttagaacgtggatgtcacttgttagtcgccact
ccaggtcgcctggtggatatgatggaaagaggaaagattgggttagatttctgcaaatac
ttagtgttggatgaagctgataggatgctggatatggggttcgaacctcaaatacgtcgt
atagttgaagaagatactatgccacccaagggtgtccgccacaccatgatgtttagtgct
acttttcctaaggaaattcagatgcttgctcgtgatttcttggatgaatatatatttctg
gccgtaggtagagttggctctacctctgagaacatcacacagaaagtagtttgggtagaa
gagtcagataaacggtcatttctgcttgacctcttaaatgcaacagggaagaattcactg
actttagtttttgtggagaccaaaaagggtgctgattctctggaggatttcttataccat
gaaggatatgcttgtaccagtatccatggggaccgatcacagagagatagagaggaagcc
cttcaccagttccgctcaggaaaaagcccgattctagtggctactgctgtggcagcaaga
ggactagacatttcaaatgtgaaacatgttatcaattttaatttgccaagtgatattgag
gagtatgtacatcgaattggccgtacaggacgtgtaggaaaccttggtcttgccacgtca
tttttcaatgaaagaaatataaatatcacaaaggatttgttggaccttcttgttgaagct
aaacaagaagtcccatcttggttagaaaatatggcttatgaacaccagtataagggtagc
aatcgtgggcgttctaagagattcagtggaggatttggtgcccgagactatcgacaaagt
agcggttctggcagttctagttttagtagtaatgcaagcagcagccgcagtggtggaggt
ggtcatggcagcagcagaggatttggtggaggtggctatggaggcttctacagtagtgat
ggatacggaggaaattgcagttctcagggggttgactggtggggcaactga
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