Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396235
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Entry
112396235 CDS
T08872
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03030
DNA replication
nasi03410
Base excision repair
nasi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112396235 (POLE)
03410 Base excision repair
112396235 (POLE)
03420 Nucleotide excision repair
112396235 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nasi03032
]
112396235 (POLE)
03400 DNA repair and recombination proteins [BR:
nasi03400
]
112396235 (POLE)
Enzymes [BR:
nasi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112396235 (POLE)
DNA replication proteins [BR:
nasi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
112396235 (POLE)
DNA repair and recombination proteins [BR:
nasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
112396235 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Tudor_3
Motif
Other DBs
NCBI-GeneID:
112396235
NCBI-ProteinID:
XP_024595648
UniProt:
A0A341B1F5
LinkDB
All DBs
Position
Unknown
AA seq
2279 aa
AA seq
DB search
MVLRNSGRRRAEPGLDGEASRDDGPSTSVSALKRLERSQWTDKMDLRFGFERLKEPGEKT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEISPAVKKNREQ
GHTSDAYTAMLTSVLQGGSVITDEEEASKKISDQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGSAFPVEIARLDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFYVFNAPDEVHLIQRWFEHIQETKPNIMV
TYNGDFFDWPFVEARAAVHGLSMYQEVGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEPEFSKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVC
DQIKAKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAVVDEATCAACGFNKPG
ANCQRKMAWRWRGEFMPASRSEYHRIQHQLESEKFPPLTPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHVTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWRKKLS
AAVEVGEAAEARRCRNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSVKKPKVTISYPGAMLNIM
VKEGFTNEQYQELAEPSSLTYVSRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEAYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTARRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVHKQKKISELFVLEGKRQVGMAQA
SEGAQSLGAPDMEDFGLVKPLHSAVPIATKRRRSHWESQEESQDLELTVPWQEILGQPPG
LGSTQEEWLVWLQFHKKKWQLQARQRLAHKKRRRLAGPEGAPRPGTVREGPSTGLGGFLR
RTARSILDLPWQIVQISATGQAGLFRLWAVISSDLYCIKLNIPRIFYVNQRVAKAEEGPS
YRKVNRVLPRSNMVYNLYEYSVPEDMYQEHINEINTELAAPDIEGVYETQVPLLFRALVQ
LGCVCVVNKQLVRHHSGWEAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHHAQGHKALF
GIFVPAQRKASVFVLDTVRSNQMPSLSALYSAEHSLLLEKVGPELLPPSKHTFEVRAETD
LKVICRAIQRFLLAYKEERRGPTLVAVQSNWELKRLAGEVPVLEEFPLVPVRVAEKVSYG
VLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHVPVGNLPEDISTFGSDLFFARHLQRH
NHLLWLSSTSRPDLGGKEADDNRLVVEFDDQAPVEVNSSGCYSTVCVELDIQNLAVNTIL
QSHHVNDMEGANSTGISFDVIQQASLEDMITGNQAASAPTSYDETALCSSTFRILKSMVV
GWVKEITQYRNIYADNQVVHFYRWLRSPSSLLHDPALHRTLHSMMKKLFLQLIAEFRRLG
SSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGIVPSSIHCGQQDSPKEGRAEGEEPEEEPEEGGAQELDVEDLLENSWNILQFLP
QAASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGSTPVRRRGASQLSQEAQGEAGALPGM
ITFSQDYVANELTQNFFTITQKIQKKVTGSRNSTELSEMFPVLPGSHLLLNNPALEFIKY
VCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSCNFCRDL
DLCKEPSFSQDGSVLPQWLCSNCQVAYDSSVIEMALVETLQKKLMAFTLQDLICLKCRGV
KETNMAMYCSCAGAFSLTIHTKVFMEQIRTFQNIAQHYGMSYLMETLEWLLQQNPQLGH
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaggaacagcgggcggcggcgcgcagagccgggcttggacggcgaggccagc
cgggacgatggcccctctacctctgtctcggcactcaagcgcctggagcgcagtcagtgg
acagataagatggatctgcggtttggttttgagagactcaaggagcctggtgagaagaca
ggctggcttatcaacatgcaccctacggagattttagatgaagataaacgcttagttagt
gcggtggattactacttcattcaagatgatgggagcagatttaaggtggccttgccctat
aagccatatttctacattgcaaccagaaagggttgtgagcgagaagtttcgtcttttctc
tctaagaagtttcagggtaaaattgctaaagtagagactgttcctaaagaggatctggac
ttgccaaatcacttggttggtttgaaacgaaattacattaagctgtccttcaacaccgtg
gaggaccttgtcaaagtgaggaaggagatctcccctgctgtgaagaaaaaccgggaacag
ggccacaccagtgatgcctatacggctatgctcaccagtgttctacaagggggcagtgtg
attactgatgaagaggaagcctctaagaagatttctgaccaattggacaacattgtagac
atgcgagagtacgatgtgccctaccacatccgcctctccattgacctgaagatccatgtg
gctcactggtacaacgtccggtaccgaggaagtgcctttccagtggaaattgcccgcctc
gatgatcttgttgaacgacccgaccctgtggttttagcatttgacattgagacgaccaaa
ctgcccctcaagtttcccgatgctgagactgatcagattatgatgatttcctacatgatt
gatggtcagggctacctcatcaccaacagggagatcgtctcagaagatatagaagatttc
gagttcacccctaagccagaatatgaagggcccttctatgtcttcaatgcgcctgacgag
gttcatctaatccaaagatggttcgaacacatccaggagaccaaacccaacatcatggtc
acctataatggggactttttcgactggccatttgtggaggccagagcagcggtccatgga
ctgagcatgtaccaggaggttgggttccagaaggacagccagggggagtacaaagcaccc
cagtgcatccacatggactgtctcaggtgggtgaagagggacagttaccttcccgtgggc
agccacaacctcaaagcagctgccaaagccaagctgggctatgaccctgtggaactggac
cccgaggacatgtgccggatggccactgagcagccccagacgctggccacctactcagtg
tcagacgcagtggccacatactacctgtacatgaagtacgtccacccctttatattcgcc
ctgtgcaccattatccccatggagcccgatgaggtgctgcggaagggctccgggacgctg
tgtgaggccttgctgatggtacaggccttccacgccaacatcgtcttccccaacaagcag
gagccagagttcagcaagctgacagatgatggccacgtgctggatgccgagacctacgtg
ggtggccacgtggaagccctggagtcgggcgtgttccgcagcgatatcccctgccggttc
cggatgaatcctgctgcctttgacttcctgctgcagcgggtggagaagaccatgcgtcac
gccatcgaggaagaggagaaggtgcccatggagcaggtcaccaacttccaagaggtgtgt
gatcagattaaggccaagctcacctccctgaaagatgttcctaaccgaattgagtgtccc
cttatctaccacctggacgtgggggccatgtaccccaacatcatcttgacgaaccgcctg
cagccctctgccgtggtggatgaggccacctgtgctgcctgtggcttcaacaagcctgga
gcaaactgccagaggaagatggcctggcggtggaggggcgagttcatgccggccagtcgc
agcgagtaccatcggatccagcaccagctggagtcagagaagttccctcccttgacccca
gagggcccagcccgggcctttcacgagctgtcccgcgaggagcaggctaaatacgagaag
cggaggctggcagattactgccggaaggcatacaagaaaatccacgtgaccaaggtggaa
gaacgtcttaccaccatctgccagcgggagaactccttctatgtggacacagtgcgtgcc
tttcgggacaggcgctacgagttcaaaggtctccacaaggtgtggagaaagaagctatct
gcggcggtggaggtgggagaggcagcggaagcaaggcgctgcaggaacatggaggtcctg
tacgactccctgcagctggctcacaagtgcatcctcaactccttctacggctacgtcatg
cgcaagggggcccgctggtactccatggagatggctggcatcgtctgcttcacgggggcc
aacattatcacccaggcacgggagctgattgagcagatcgggaggcccttagagctggac
acagatggaatatggtgtgtcctgcccaacagcttcccggaaaactttgtcatcaagacg
accagtgtgaaaaagcccaaggtgaccatctcctaccctggggctatgttaaacatcatg
gtcaaggagggcttcaccaatgagcagtaccaggagctggctgagccttcctcgctcacc
tatgtctcccgctcagagaacagcatcttttttgaggttgacggaccctaccttgccatg
atccttccagcctccaaggaagaaggcaagaaactgaagaagaggtatgccgtattcaat
gaggatggttccctggctgagctcaagggcttcgaggtcaaacgccgtggggagctgcag
ctgattaaaatcttccagtcctcagtattcgaggccttccttaagggcagcaccctagag
gaggcgtatggctctgttgccaaggtggctgattactggctggacgtgctgtacagtaag
gcagctaacatgcctgattctgagctgttcgagctgatctctgagaaccgttccatgtct
cggaagctggaagattatggggagcagaagtctacgtccatcagcacggccaggcgcctg
gctgagttcctgggggatcagatggtgaaggatgcagggctgagctgccgctacatcatc
tcccggaagcctgaggggtctccggtcacagagagggccattccactcgccattttccag
gcagagcccacggtgaggaagcactttctccggaaatggcttaagagttcttcccttcaa
gactttgatattcggacaattctggactgggactactacatcgagcgactgggaagtgcc
atacagaagatcatcacaatccctgcggctctgcagcaggtgaagaacccagtaccacgt
gtcaagcaccctgactggctgcacaaaaaactgctggagaagaacgatgtccacaagcag
aagaagatcagtgagctcttcgtccttgagggcaagagacaggtgggcatggcacaagct
tcagaaggtgcccagagccttggcgcccccgacatggaggacttcggccttgtgaagccg
ctccactcggcagtgcccattgctaccaagaggaggcgtagccactgggagagccaggag
gagtcgcaggacctggagctgacggtgccctggcaggagatcttggggcagcctccgggg
cttggatccacccaggaagagtggctggtctggctccagttccacaagaagaagtggcag
ctacaagctcgacagcgccttgctcacaagaagaggcggcgtctggcggggccagaaggt
gcaccgaggcctgggaccgtccgagaggggccctccacagggctggggggcttcttgcga
agaactgctcgcagcattctggacctcccgtggcagatcgtgcaaatcagcgcgaccggc
caggctggcttgttcaggctgtgggctgtcatcagcagtgacctgtattgcatcaagctg
aacattccccggatattctacgtgaaccagcgggtggccaaagcggaggagggcccttcc
tatcggaaggtgaatcgggtccttcctcgctccaacatggtctacaatctctatgagtac
tcggtgccagaggacatgtaccaagagcacatcaacgagatcaacactgagctggcggcg
ccggacatcgagggcgtgtacgagactcaggttccgttattgtttcgggccctggtgcag
ctgggctgtgtgtgtgtggtcaataaacagttggtgaggcatcactcaggctgggaagca
gaaaccttcgctcttgagcacctggagatgcgctctctggcccagttcagctacctggaa
ccagggagcatccgccacatctacctgtatcaccacgcgcagggccacaaagctctcttc
ggcatcttcgtgcccgcgcagcgcaaggcgtctgtgtttgtgttggataccgtgcgaagc
aaccagatgcccagcctcagtgccctgtactcagctgagcacagccttctgctggaaaaa
gtgggccctgagctcctgccccccagcaaacacacttttgaagttcgggctgaaacagac
ttgaaggtcatctgcagagccatccagcgcttcctgctggcctacaaagaggagcgccgt
gggcccacactcgtcgctgttcagtccaactgggagctgaagaggctggctggcgaagtg
cccgtcttggaggagttcccgctagtgcctgtccgtgtggctgagaaggtcagctacggg
gtcctggattggcagcgccacggagcccggcgcatgatccggcactacctcaacctggac
acttgtctgtcacaggccttcgagatgagcaggtacttccacgtccccgttgggaatctg
ccagaggacatctctacgtttggctccgacctcttctttgcccgccatctccagcgccac
aaccacctcctctggctgtcttccacatcacggcctgacctgggcgggaaggaggctgac
gacaaccgcctcgtcgtggagttcgatgaccaagcccctgtggaggtcaacagttcaggc
tgttattccacagtgtgcgtggagctggacattcagaacctggctgtcaacaccatcctg
caatctcaccacgtcaatgacatggagggggccaacagcacgggcatcagcttcgatgtg
atccagcaggcctccctggaggacatgatcacgggcaatcaggctgccagcgctcccacc
agctacgacgagacggccctctgctccagcaccttcaggatcctgaagagcatggtggtg
ggctgggtgaaggagatcacgcagtaccgcaacatctacgcggacaaccaggtggtgcac
ttctaccgctggctccggtccccgtcctcgctgctccacgaccccgccctgcaccgcacg
ctgcacagcatgatgaagaagctcttcctgcagctcattgctgagttcaggcgcctgggg
tcgtcagtcgtgtatgccaacttcaaccgcatcatcctgtgcaccaagaagcggcgggtg
gaggacgcccttgcctacgtggagtacatcaccaacagcatccattctaaagagatcttc
cattctttgacaatttctttctctcgatgctgggaatttcttctctggatggatccctct
aactatggtggaatcaaaggaattgttccatctagtattcactgtggacagcaagactcc
cccaaagagggcagagcagagggggaggagcctgaggaggagcctgaggagggaggtgca
caggagctggatgtcgaggacctgctggaaaacagctggaatatcctgcagttcctgccg
caggcagcctcctgccagagctacttcctcatgatcgtttcagcatacatcgtggccgtg
taccacagcatgaaggaggagctgaggcgcagcgccccgggcagcacccctgtgaggagg
aggggggccagccagctctcccaggaggcccagggagaggccggagcccttccgggaatg
atcaccttctcacaagattatgtggcgaacgaactcactcagaacttcttcaccatcaca
cagaagattcagaagaaagtcacaggctctcggaactcgactgagctctcagaaatgttt
cctgtcctccccggttctcacctgctcctcaataaccccgctctggagttcatcaaatat
gtgtgcaaggtcctgtccctggacacgaacatcacaaaccaggtgaacaagctaaaccga
gacctgcttcgcctggtagatgtcggcgagttctcagaggaggcccagttccgagacccc
tgccgctcctacgtgctccctgaggtcatctgccgcagctgtaacttctgccgggacctg
gacctgtgcaaagagccctccttctctcaggatgggtctgtgctgcctcagtggctctgc
tccaactgtcaggtagcctacgactcgtcagtcatcgagatggccctggtggaaaccctg
cagaagaaactgatggccttcaccctgcaggacctgatctgcctgaagtgccggggtgtg
aaggagaccaacatggccatgtactgtagctgtgccggggccttctccctcaccatccac
accaaggtcttcatggagcagatcagaaccttccagaacattgcccagcactatggcatg
tcgtacctcatggagaccctggagtggctgctgcagcagaacccccagctgggacattag
DBGET
integrated database retrieval system
