KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396377
Entry
112396377         CDS       T08872                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03020  RNA polymerase
nasi03420  Nucleotide excision repair
nasi04623  Cytosolic DNA-sensing pathway
nasi05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112396377 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    112396377 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    112396377 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    112396377 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nasi03021]
    112396377 (POLR2E)
   03400 DNA repair and recombination proteins [BR:nasi03400]
    112396377 (POLR2E)
Transcription machinery [BR:nasi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112396377 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     112396377 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     112396377 (POLR2E)
DNA repair and recombination proteins [BR:nasi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112396377 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 112396377
NCBI-ProteinID: XP_024595884
UniProt: A0A341B120
LinkDB
Position
Unknown
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaagaggagacgtaccggctgtggaaaatccgcaagaccatcatgcagctg
tgccacgatcgtggctacctggtgacccaggacgagctggaccagacgctggaggagttc
aaggcccagtttggggacaagcccagtgaagggaggcctcggcgcacagacctcacggtg
ctggtggcccacaacgatgaccccactgaccagatgttcgtcttcttcccagaggagccc
aaggtgggcatcaagaccatcaaggtgtactgccagcggatgcaggaggagaacatcacg
cgggccctcattgtggtacagcagggcatgacaccctccgccaagcagtccctggtcgac
atggcccccaagtacatcctggagcagtttctgcagcaggagctgctcatcaacatcacg
gagcatgagctggtcccagagcacgttgtcatgaccaaggaggaggtgacggagttgctg
gcccggtataaactccgagagaaccagctgcccaggatccaggcgggagaccccgtggca
cgttactttgggataaagcgagggcaggtggtgaagatcatccggcccagcgagactgca
ggcaggtacatcacctaccggctggtgcagtag

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