KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396437
Entry
112396437         CDS       T08872                                 
Symbol
LSM7
Name
(RefSeq) LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03018  RNA degradation
nasi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112396437 (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112396437 (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nasi03019]
    112396437 (LSM7)
   03041 Spliceosome [BR:nasi03041]
    112396437 (LSM7)
Messenger RNA biogenesis [BR:nasi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112396437 (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     112396437 (LSM7)
Spliceosome [BR:nasi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    112396437 (LSM7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 112396437
NCBI-ProteinID: XP_024595943
UniProt: A0A341B297
LinkDB
Position
Unknown
AA seq 103 aa
MADKEKKKKESILDLSKYIDKTILVKFXGGREASGILRGFDPLLSLVLDGTIEYMRDHDD
QYELTEDTRQLGLVVCRGTSVVLIRPQDVMKAIPXPFIQQQDA
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggacaaagagaagaaaaagaaggagagcatcttggacctgtccaaatacattgac
aagacgatcctagtgaagttctaaggaggccgagaagccagtggaatcctgagagggttt
gacccgctgctcagcctcgtgctggacggcaccatcgagtacatgagagaccatgacgac
cagtacgagctcacagaggacacccggcagctgggcctggtggtgtgcaggggcacctct
gtggtgctcatccgcccgcaggacgtcatgaaagccatccccnaacccttcatccagcag
caagatgcctag

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