Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396657
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Entry
112396657 CDS
T08872
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112396657 (PDZRN4)
Enzymes [BR:
nasi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112396657 (PDZRN4)
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
112396657 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_6
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112396657
NCBI-ProteinID:
XP_024596196
UniProt:
A0A341B0A5
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MGFALERFAEAVDPDFQCRLCGQVLEEPLCTPCGHVFCARCLLPWAARRRRCPLQCQPLA
PGDLYRVLPLRSLVQKLRAQCDYRARSCGHSVGLRELAAHVERCDFGPALRRRRGCVSGP
CGRGGGDASARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQVLAWRRREKALLAQLW
ALQGEVLLTARRYQKKFTQYMAHVRNFARDPGGGRGRDGEHKPFTIVLERENDTLGFNII
GGRPNQDNQEETPMEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVEAF
RNAKEPIVVQVLRRTPLSKPAYGTAPEVRLVNASTQTDITFEHIMALAKLRPPTPPVPDI
CPFLLSDSCHSLHPMEHEFYEDDEYLSSLPADADRTEDFEYEEVELCRVNSQEKLGLTVC
YRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDAQDREAAVALLSSDECRRI
VLLVARPESQLEEGWLEDERNEYLEELNSSMLEEQHNEAMQRTASQVEQPKKQEEEEGTT
DTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNGTSLKSKRELGQSQDTLGSTE
LQCNESFVSGEYIDSDCTGNQDEECERFRQLLELKCKIRKHGEYDLYYSSSTIECNQGGR
EGVEHELQLLNEELRNIELECQNIMQAHRIRKVTDQYGDIWALHEGGFRNYNTSIDTQRG
KLDDILEHPEKSDKESSSAYNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAAN
QSSSGQSSKESTKAKTTEQGCGIEGKEKTSESSKLSDPEKTSGEHIPYLSPYHSSSYRYA
NIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSVCKESQKCSEPKMEWKVKIRSDGTRYI
TKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRRE
FMMRSRLECLKESPQSGSESKKEVNIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSP
DGTQVPNAFLSVTAV
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgccgaagcggtggacccggatttccagtgcaggctg
tgcggccaggtgctggaggagcccctgtgcacgccgtgcgggcacgtcttctgcgcccgc
tgcctgctgccctgggcggcgcggaggcgccggtgcccgctgcagtgccagcccctggcg
ccgggcgatctgtaccgggtgctgcctctgcgcagcctcgtccagaagctgcgcgcccag
tgcgactaccgcgcccgcagctgcggccactcggtcgggctgcgcgagctggcggcgcac
gtcgagcgctgtgacttcggccctgccctccgccgccgccggggctgcgtctccgggccg
tgcggccggggcggcggggacgcgtccgcgcggggnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnngcctcaagtcctggcctggaggcggcgcgagaaggcgctgctggcgcagctctgg
gcgctgcagggggaggtgctgctcacggcccgcaggtaccagaagaagttcacccagtac
atggctcacgtccgcaacttcgccagggacccgggcggcggccgcggccgggatggagag
cataagccattcactattgtgttagaaagagaaaatgacactttgggattcaatattata
ggaggtcgaccaaatcaggataatcaagaagaaacaccaatggaaggaatttatgtttca
aagattttggaaaatggacctgctgatagagcagatggcttggagattcatgacaaaatc
attgaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtggaagctttt
cgaaatgccaaggagcccattgtggtccaggtgctaaggcgaacacctctcagtaaacca
gcctatgggacggccccagaagtgcggctcgtgaatgccagcacccagacggacatcacc
tttgaacatatcatggccctggccaaacttaggccacccacccctccagtgcccgacatc
tgtccatttctgctctcagacagctgccattctcttcatccgatggagcatgaattttat
gaggatgatgagtatctttccagcttgcctgctgatgcagacagaactgaggactttgaa
tatgaggaggtcgagttgtgtcgtgttaacagtcaagaaaagctgggcctgacagtctgt
taccgaacggatgatgaagaagacaccggcatttatgtcagcgaggtagatccaaacagc
attgctgccaaagatggccggattcgagaaggggatcgtattttgcaaataaatggggaa
gacgcccaggatcgagaggcggcggtggccctgctatctagtgatgagtgccggagaatc
gtgctgctggtcgcaaggccggagagtcagctggaggaaggctggctagaagatgaaagg
aatgaatatttagaggagttaaactcgtcgatgttggaggaacagcataatgaagcaatg
cagcgcactgccagtcaggtggagcagccaaaaaaacaagaagaagaagaaggcacaaca
gacacggcaacatcctcatccaacaaccatgagaaggacagtggagtggggcgcacagat
gaaagcttgcggaacgacgagagctcagagcaggagaatgcagccgaggatcccaatggc
acatctttgaagagcaagagagagctggggcagagccaagacactctgggaagcactgaa
cttcagtgtaatgagagcttcgtgtctggtgaatacattgactcagactgtactggcaac
caagatgaggagtgcgaaaggtttcggcagctcttggagctcaaatgcaagattcggaag
catggagagtatgacctgtattactcaagcagcacaatagaatgcaatcaagggggacga
gagggagtggagcacgaactacagttgcttaatgaagaactaagaaacattgaacttgag
tgccaaaatatcatgcaggctcacaggatccggaaagtgacagaccagtatggagacatc
tgggcactacatgagggaggattccgaaattataacaccagcatagatacgcagagggga
aaactagatgacatccttgaacacccagaaaagtcagataaagagagttctagtgcttac
aacacagctgaaagctgcagaagcactccactcactgtggaccgttcccctgacagttcc
ctcccaagagtgatcaacctcaccaataagaaaaacctgagaagcacaatggcagccaat
cagtcctcttctggacagagtagtaaagaatcaaccaaagccaaaaccactgaacaaggt
tgtggcattgaaggcaaagagaagacttcagaaagcagcaagctttctgatccagagaag
accagtggtgaacacatcccttacctctctccttaccacagctcctcctatagatatgca
aacatcccagcacatgcccggcattatcaaagttacatgcaattaattcaacagaagtct
gcagtcgagtacgctcagagccagctcagcttggtgagcgtgtgcaaggagtctcagaag
tgctcagaacccaagatggaatggaaggtgaaaatcaggagtgacgggacacggtacatc
accaagagacccgtgagggaccgcattctgaaggagcgtgccttaaagatcaaggaggag
cggagtggcatgacgacggacgatgacaccatgagtgagatgaaaatggggcgctactgg
agcaaagaggagaggaagcaacacctggtgcgggccaaagagcagcggcgccgccgagag
ttcatgatgcggagccggttggagtgtctcaaggagagtccccagagcggcagcgagagc
aagaaggaggtcaacatcattgaactgagtcacaaaaagatgatgaagaagagaaacaag
aaaattttggacaactggatgacaatccaagaactgatgacccatggggccaagtcccct
gatggcacacaagttcctaatgcctttttgtcagtcaccgcggtatga
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integrated database retrieval system
