Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396749
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Entry
112396749 CDS
T08872
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04151
PI3K-Akt signaling pathway
nasi04382
Cornified envelope formation
nasi04510
Focal adhesion
nasi04512
ECM-receptor interaction
nasi04518
Integrin signaling
nasi04820
Cytoskeleton in muscle cells
nasi04926
Relaxin signaling pathway
nasi04933
AGE-RAGE signaling pathway in diabetic complications
nasi04974
Protein digestion and absorption
nasi05146
Amoebiasis
nasi05165
Human papillomavirus infection
nasi05200
Pathways in cancer
nasi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112396749 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112396749 (COL4A4)
04518 Integrin signaling
112396749 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112396749 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112396749 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112396749 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
112396749 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
112396749 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112396749 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
112396749 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112396749 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
112396749 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112396749 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nasi04147
]
112396749 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
nasi00536
]
112396749 (COL4A4)
Exosome [BR:
nasi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112396749 (COL4A4)
Glycosaminoglycan binding proteins [BR:
nasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112396749 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112396749
NCBI-ProteinID:
XP_024596371
UniProt:
A0A341B0Q1
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MGDPGEVGQQGSPGPTLLVQPPDSGLYKGEKGIKGTPGIIGPPGPPGPKGEPGIGTKGEK
GIPGFPGPRGDPGFYGSPGFPGLKGEPGVFGDPGPFGFLGPKGDPGDRGHPGPPGFVATP
ALPLKGPPGDPGHPGRYGETGAVGPPGPPGPPGRPGEVCAGMMGPPGPRGFPGHPGFPGA
AGIPGRADSAPGKPGNQGPPGLPGVPGLPGPPGSDVVYCSAGPPGPQGIKGKVGPPGRRG
SKGEKGSTGLCACQPGPSGPPGPPGLPGRQGSKGDLGLPGRLGEKGYPGLPGARGSPGPP
GKPGTSGPPGSKGEKGDLVVSRVKGHKGERGPDGPPGFPGQQGQHGQDGYPGEKGDPGPL
GDHEDAAPGDKGPPGPPGAPGRAGPRGPPGLGFPGPPGERGQPGAPGCPGKRGPDGWKGQ
KGDTIPCNVTYPGRPGPPGFDGPPGPKGFPGRRGAPGLRCLDGEKGQRGKPGISEIPGPP
GFHGDMGDPGFGGEKGSSPVGPPGSPGEPGVNGQKGPPGDSAVGYPGPPGKRGLLGVPGS
KGLRGDPGRLGAAGPAGMPGFPGLKGPKGREGSAGFPGIPGPPGHSCERGAPGRPGPPGL
PGAPGSPGAPGWKGQQGDTGPPGPAGMKGLPGVPGRPGADGPPGPPGVPGPSGDDALPGL
PGPKGPQGLPGFLGFPGERGKPGPDGHPGRKGEHGEQGWPGSLGERGVKGDKGARGPPGH
EGEMDIISKKGETGEPGPPGDGGFPGEEGDKGHPGIQGKKGEPGSCGPPGFHRGEPGRQG
QPGLPGPPGPPGSPGLRGLIGFPGFPGDQGEPGSPGPPGLSGIDGTRGPKGYKGEPASQF
GLPGPKGHLGAPGEQGLPGVQGPGGPPGRPGPPGSSGPAGCPGNPGLPGLQGHPGEMGDP
GPRGLVGDPGAPGLPGIKGPSGSPGLNGLHGLKGQKGSKGTSGSHKMGPPGPVGMPGPKG
ETGDPGSPGISPPGLFGDKGPPGPPGRPGPPGPAGAPGRALKGDIPDPGLPGDQGPPGPS
GPRGLPGPPGPPGRVELLKGEPGDCGLPGPPGPPGPPGPPGRKGFPGCDGKDGQKGPMGF
PGLQGPPGTPGPPGEKGLPGPPGRQGPLGPPGSRGEPGPPADVDACPRIPGLPGVPGPRG
PEGTMGPPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPGHKGDMGEAGCPGVPGPPGP
VGDPGPEGFGPVYPSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQERAHNQDLGL
AGSCLPMFSTLPFAHCNIHQVCQYARRNDRSYWLASAAPLPMTPLSEEEIRPYISRCAVC
EAPAQAVAVHSQDQSVPPCPRTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAA
PFLECQGRQGTCHFFANEYSFWLTTVRPDLQFSSAPSPDTLKESQAQRQKISRCQVCVKH
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgggagacccgggtgaggttggccaacagggttctccaggacccacccttctggtgcag
ccacctgactctggtctctataaaggagaaaagggtattaaaggaacgcctggaatcatt
ggacctcccggaccaccaggccccaagggggaacccggtattgggacaaaaggagagaaa
ggtattcctggatttccaggacctcggggggaccctggcttctatggatctccaggtttt
ccaggattaaagggggaaccaggagtgtttggagatcctgggccgtttggatttcttggt
ccaaagggagatcctggagaccgcgggcacccaggaccaccagggtttgtggcaactcca
gctcttccactcaaagggcctccaggggatccagggcaccctggccgctatggagaaacg
ggggctgttggaccacctggtccccctggtccccctggtagaccaggggaagtctgtgca
ggcatgatgggaccccctgggccacgagggtttcctggtcatccaggatttccaggggca
gctggtattcctgggagagctgattctgctccagggaaaccaggcaaccagggaccacct
gggttgcctggagtgccagggttgccgggacctccaggatcagatgttgtatattgtagt
gctgggcctcctggaccacaaggaataaaaggcaaagtgggtcctccaggaagaagaggc
tcaaaaggagaaaaaggaagcacagggctctgtgcctgccagcctggtccctcaggccca
cccggccctccaggacttcctgggaggcaagggagtaaaggagacttgggactccctggg
cgacttggagaaaaaggttacccaggccttcctggtgccagaggatctccagggccacca
ggaaaacctggtacctcaggaccacctggcagcaaaggagagaaaggtgacctggttgta
tcaagagtgaaagggcacaaaggagaaagaggtcctgatgggcccccaggatttccaggg
cagcagggacaacacggtcaagatggatatcctggagaaaaaggggacccaggaccgctg
ggagatcatgaagatgcagccccaggtgataaagggcctcctggaccaccaggcgccccg
ggcagagcaggacctagggggcctccgggactgggatttcctggtccaccaggagagaga
gggcaaccaggagctccaggctgcccaggcaagaggggccctgatggctggaagggtcag
aaaggtgatacaattccttgtaacgtaacctaccctgggaggccaggcccgccaggtttt
gatggacctccaggtccaaagggatttccaggtcgtcggggagctcctgggttgaggtgt
ctggatggggaaaagggtcaacgtggcaaaccaggaatctcagaaatacctggtccacct
ggttttcatggtgatatgggagatccaggttttggaggtgaaaaggggtcctcccctgtc
gggcccccaggctctccaggtgaacctggagtgaatggtcagaaaggacctccaggagac
tctgctgttggctacccaggacccccaggaaagaggggtcttttaggagtaccagggtca
aaaggactcagaggtgatcccggacgactgggggctgcagggccagctggcatgcccgga
ttcccgggtctcaaaggtcccaaagggagagagggaagtgctgggtttccagggatccca
ggtccacccggccattcctgtgaaagaggcgctccagggagaccagggccaccagggctc
cctggagctccaggaagtccaggtgccccaggttggaaaggacaacaaggggacacgggg
cctcctggacccgctggaatgaagggcctccccggagtcccaggacggccaggggcagat
ggacccccagggcccccgggagtcccaggccccagtggggatgatgcgctacctggtctt
ccaggcccaaagggaccccaggggctacccggcttcctgggttttccgggagagagagga
aaacctggcccggatggacaccctggcagaaagggagaacacggagaacagggttggccc
ggctccctgggagagcgaggagtgaaaggtgacaaaggagcaagaggacccccaggacat
gaaggagaaatggatattatttcgaaaaagggggaaaccggggaacctggaccgcctgga
gatggtggattcccaggagaagaaggtgataaaggccatcctgggatacaagggaagaaa
ggagagccaggaagctgtggaccacctggatttcacagaggggagcctgggaggcaaggg
cagccaggccttcctggacccccaggccctccaggctcacctgggctgagagggctcatt
ggctttccgggatttccaggtgaccagggtgagccaggttctccagggccccctggactt
tcaggaattgatggtacaagaggacctaaaggatacaaaggggaacctgcaagtcagttt
ggcctacctggtccaaagggacatttgggagcacctggagagcagggcttgcccggtgtt
caaggacctggaggaccacccggaaggccaggaccgcctggctcctctggaccagcaggg
tgtccaggtaatccagggctgcctgggctgcagggacatccaggagaaatgggggatcct
gggccaagaggcctcgtgggggatccaggggcaccaggtcttccgggaataaaaggtccc
tctgggtcgcccggcctgaacggcttgcacggtttaaagggtcagaaaggcagcaaaggc
acttcaggttcccataaaatgggcccacctggtccagtgggaatgcccgggccaaaaggc
gagacaggagaccccgggagcccaggaatttctcctccaggacttttcggagacaaaggt
cccccaggtcccccagggagacctggaccgcctggtcctgcaggtgccccaggaagagct
cttaagggtgacattccggacccgggtctgcctggagatcagggacctcctggtcccagt
ggtccaagaggactacccgggcctccagggccccctgggagggttgaacttctgaaaggt
gaaccaggtgactgtggtctgccggggcctccaggtcccccaggcccaccaggccctcca
ggacgcaaaggcttcccaggatgtgatggaaaagatggccagaaaggaccaatgggattc
ccggggctgcaggggccacctggaactcctgggccacctggagagaagggtttacctgga
cctccaggcagacaggggcccttgggtcctccaggttccagaggtgaacctgggccccct
gcagacgtggatgcttgcccccgaatcccggggcttcctggggtaccaggcccaagagga
ccagaaggaaccatggggccccccggaatgagaggccccccaggaccagggtgcaaagga
gagcccgggctggatggcaggagaggcgaggatggccttccagggtcccctgggcctccg
ggacacaaaggtgacatgggagaagcgggctgcccaggagtaccaggccctcctgggccc
gtgggggatcctgggcccgaagggttcggccctgtataccccagtggcttcctcctggtt
ctccacagtcaaacagatggagaacccacctgccccgcgggcatgcccaggctctggacc
gggtatagtctgttatacctggaaggacaggagagagctcacaatcaagaccttggtctg
gcgggctcctgcctccccatgttcagcacgctgcccttcgcccactgcaacatccaccaa
gtgtgccagtacgcccggaggaacgacaggtcctattggctggcgagcgccgcaccgttg
cctatgacgccgctctcggaggaggagatccgcccgtacatcagccgctgcgccgtgtgc
gaggcccccgcgcaagccgtggctgtgcacagtcaggaccagtctgtcccgccgtgtccg
cggacctggaggagcctctggattgggtactctttcctgatgcacacaggcgctggggac
caaggaggcggccaggccctcatgtcacccggcagctgcctggaggatttcagagctgca
ccgttccttgaatgccaaggacgtcagggaacttgccacttttttgcaaatgagtatagc
ttctggctgacaactgtgagacccgacttgcagttttcctcagcaccctcaccggacacc
ttgaaagaaagccaagcccagcgccagaaaattagcaggtgccaggtctgtgtgaagcat
agctag
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integrated database retrieval system
