Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112396760
Help
Entry
112396760 CDS
T08872
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112396760 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112396760 (TRIP12)
Enzymes [BR:
nasi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112396760 (TRIP12)
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
HECT type E3
112396760 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
112396760
NCBI-ProteinID:
XP_024596390
UniProt:
A0A341B0S7
LinkDB
All DBs
Position
Unknown
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTASELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDSSRGVKRSASP
DYNRTSSPNSAKKPRALQHTESPSETSKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKS
GATASSRSQKRKRTESSCIKSGSVSEATGAEERSAKPTKLASKSAASAKAGCSTITDSSS
AASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASASRRGSGLGKRGAAEARRQEKMADPEGNQETVNSSAARTDETPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCLEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNSSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTTSVSSGTATAATNASADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGSRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSHSNNIEP
ARAAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREI
RLKRFLHVFFSSPLPGEEPTGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
TGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESNKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWNDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMREKLLMAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcgataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaatactgcttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagtcccacaaccagaggatccagacagagccaatacttcagaaaggcag
aaaacggggcaggtgcctaagaaagacagttctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccagttctcctaactctgcaaagaaacccagagcacttcagcatact
gaatctccctcagaaacaagtaagccacacagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacagtctccatcaacaagcaaggctcataccaggaagagt
ggggccactgctagttcacggagtcagaaaagaaagaggacagagagttcttgtataaag
agtggttctgtgtcggaagcaactggtgccgaagagagatctgcaaaacctaccaagctg
gcttcaaaatcggccgcctcagccaaagctgggtgtagcaccatcaccgattcttcttct
gctgcctctacttcctcctcatcttctgctgtagcctcggcctcctctactgttccacca
ggtgccagggtgaaacaaggaaaagaccagaacaaggccagacgttcccgttcagcatcc
agtcccagtccaagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgtttcagccctaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaagaaaatctaccaagaagcgcagcgaatccccacctgctgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagtgccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgtcgacaggagaagatggcagac
cctgaaggcaaccaggagacagtgaattcttcagctgcacggacggacgaaactccccaa
ggagcggcagcctctagttctgttgcaggggctgtgggcatgaccacttctggggagagt
gaatcggatgattccgagatgggacgattgcaagctctcttagaggccaggggtcttcct
cctcacctgtttggtcctcttggtcctcggatgtcacaacttttccatagaacaattgga
agcggagctagttctaaggcccagcagcttctgcaaggactgcaagcaagcgatgaaagc
cagcaactccaggcagttattgagatgtgtcagttattggtcatgggaaatgaggagaca
ctgggagggtttcctgtcaagagtgtagttccagctttgataacattactgcagatggag
cataattttgatattatgaaccatgcttgtcgagccttaacatacatgatggaagcactt
cctcgatcatctgctgttgtagtagatgcaattcctgtctttttagaaaagctgcaggtt
attcagtgtattgacgtggcagagcaggccttgacggccttggagatgttatcacggaga
cacagtaaagccattctacaggcgggtggcttggcagactgcttgctgtatctagagttc
ttcagcataaacgcccaacggaatgcactagcaattgcggccaattgctgccagagtatc
acaccagatgaatttcattttgtggcagattccctcccattgctaacccaaaggctaacc
caccaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtctagtggacaac
tttcaacatgaggagaatttactccagcaggttgcctccaaagatctgctaacaaacgtt
caacaactattggtagtaactccaccaattctaagttctgggatgtttataatggtggtt
cgcatgttttctttgatgtgttccaactgtcccactttagctgttcaacttatgaagcaa
aacattgcagaaactcttcactttctcctgtgtggtgcctccaatggaagttgtctggaa
cagattgatcttgttccacgaagtcctcaagaactgtatgaactgacatctctgatctgt
gaacttatgccatgtttaccaaaagaaggcatttttgcagttgataccatgcttaagaag
ggaaatgcacagaacacagatggtgcgatatggcagtggcgtgatgaccggggcctttgg
catccctataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatactaacagtagtggatattcagagttaaagaaggatgatgctcgagcacagcttatg
aaagaggatccggaactggctaagtcttttattaagacattatttggtgttctttatgaa
gtgtatagttcctcagcaggacctgcggtcagacataagtgccttagagcaattcttagg
ataatttatttcgcggatgccgaacttctaaaggatgtcctgaaaaatcatgctgtttca
agtcatattgcttccatgctatcaagccaagacctgaagatagtagttggagcacttcag
atggcagagatcttaatgcagaagttacctgatatttttagtgtttatttcagaagagaa
ggtgtaatgcatcaagtaaaacacttagcagaatcggaatcattgttgacaagtccacca
aaggcatgtacgaatgggtcaggatccttggggtccacgacgtctgtcagcagtggaaca
gccacggctgccactaacgcctcagctgacttgggatcccccagcttgcagcacagcaga
gatgattctttagatctgagccctcaaggtcgattaagtgatgttctaaagagaaaacga
ctgccaaaacgaggatcaagaaggccaaagtattcacctccaagagatgatgacaaagta
gacaatcaagctaaaagccccaccactactcagtcacctaaatcttctttcctggcaagc
ttgaatccaaaaacgtggggaaggttaagcgcacagtctcacagcaacaacattgaaccg
gcccgagctgcgggagttagtggtcttgccagggccgcctcaaaggacaccatatccaat
aacagagaaaaaatcaaaggttggattaaagagcaggcgcataaatttgtagagcgttat
ttcagttctgagaacatggatggaagcaaccctgcgttgaatgtccttcagagactttgt
gctgcaaccgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcagagtcagatgtttcatcatttgaaatccaacatagtggatttgtg
aagcagctgttgctttatttgacatctaaaagcgaaaaggatgctgtgagcagagagatc
agattaaagagattccttcatgtatttttttcttctccacttcctggagaggagcccact
ggaagagtagaaccagtgggtaatgcacctttgttggcattagttcacaagatgaacaac
tgcctcagccagatggaacagtttccagtcaaagtgcatgactttccgagtggaaatggc
acaggaggcagcttttctctcaacagaggatcacaggctttaaaatttttcaacacacat
cagttaaaatgccagttacaaaggcatccagactgtgcaaatgtgaagcagtggaagggt
ggacctgtcaagattgaccctctggctttggtgcaagcaatcgagagataccttgtagtt
agagggtatggaagagtaagagaagatgatgaagacagtgacgatgatggctctgatgag
gaaatagacgagtctctggctgctcaattcttaaattcaggaaatgtacgacacaggcta
cagttttacatcggagaacatttgctaccgtataacatgactgtgtatcaggcagtacgg
cagttcagtatacaggccgaagatgaacgggaatccacggatgatgagagcaatcctcta
ggaagagctggtatttggacgaaaactcatacaatatggtacaaacccgtgagagaggat
gaagaaagcaataaagattgtgttggtggcaaaagaggaagagcccaaacagctccaaca
aaaacttcccctagaaatgcaaaaaagcacgatgagttgtggaacgatggagtgtgcccg
tcagtatcaaatcctttagaagtttacctcatacccacaccacctgaaaatataactttt
gaagacccttcattagatgtgattcttcttttaagagttttacatgccatcagtcgatac
tggtattacttgtatgataatgcagtgtgcaaggaaattatcccaactagtgaatttatt
aacagtaagttgacagcaaaagcaaataggcagcttcaggatcctttagtaatcatgacg
ggaaatatcccaacatggcttactgaactaggaaaaacctgcccgtttttcttccctttt
gatacccggcaaatgcttttttatgtaactgcatttgatcgggaccgagcaatgcaaaga
ttacttgataccaacccagaaatcaaccagtctgattctcaagatagcagagttgcacct
agattggatagaaaaaaacgtactgtgaacagagaggagctgctgaaacaagcagagtct
gtgatgcaggatctcggcagctcacgggccatgttagaaattcagtatgaaaatgaggtt
ggcacaggtctggggcctacactggagttttatgcacttgtatctcaggaactacagaga
gctgacttgggtctctggagaggggaagaagtaactcttagcaatccaaaaggaagccaa
gaagggaccaagtatattcaaaacctccaaggcctgtttgcgcttccctttggtaggaca
gctaagccagctcatatcgcaaaagttaagatgaagtttcgcttcttaggaaaattaatg
gccaaggctatcatggatttcagattggtggaccttcccctgggcttacctttttataaa
tggatgctacggcaagaaacttcgctgacgtcacacgatttgtttgacattgacccagtt
gtagccagatcagtgtatcacctagaagacattgtcagacagaagaaaagacttgaacaa
gataaatcccagaccaaagagagtctacagtatgcattagaaaccctgactatgaatggc
tgctcagttgaagatctaggattggatttcactctgccagggtttcccaacatcgaactg
aagaaaggaggaaaggatataccggtcaccatccacaatttggaggagtatctaagactg
gttatattctgggcactaaatgaaggcgtttccaggcagtttgattcattcagagatgga
tttgaatcagtcttcccactcagtcaccttcagtacttctatccggaagaactggatcag
ctcctgtgtggcagtaaagcagacacttgggatgcaaagacactgatggaatgctgcagg
ccagatcacggttatactcatgacagtcgggctgtgaagttcttgtttgagattctcagt
agttttgataatgagcagcagaggttatttctccagtttgtgacaggtagcccaagattg
cctgttggaggcttccggagcttgaatccacctttgacaattgtccggaagaccttcgaa
tcaacagagaacccagatgacttcctgccctccgtaatgacctgtgtgaactaccttaag
ttgccggactattcgagcatcgagataatgcgagaaaagctgttgatggcagcgagggaa
gggcagcagtcgttccatctttcctga
DBGET
integrated database retrieval system
