Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112397011
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Entry
112397011 CDS
T08872
Symbol
SCRIB
Name
(RefSeq) LOW QUALITY PROTEIN: protein scribble homolog
KO
K16175
protein scribble
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04390
Hippo signaling pathway
nasi04530
Tight junction
nasi05165
Human papillomavirus infection
nasi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
112397011 (SCRIB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112397011 (SCRIB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
112397011 (SCRIB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112397011 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
112397011
NCBI-ProteinID:
XP_024596793
UniProt:
A0A341B4V5
LinkDB
All DBs
Position
Unknown
AA seq
1575 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELG
GLVLLTDLLLSQNWLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENL
LTALPRSLGKLSKLTNLNVDRNRLEALPPEIGGCMALSVLSLRDNRLAVLPPELAHTAEL
HVLDVAGNRLQSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQP
PLSLEDPGPRSSPSESWGDAPLGRVSVIQFLEAPAGDEDAEEAAAEKRGLQRRATPHPSE
LKVMKRGVERRSEATSCRPDSTQHSPSPPPSEEEKRLSTESGLSADLHLSASTASQGEPE
GLLAEEEEPSQQESTPTSQEEVTEETYEEPTVRFAEDTLLLPREDGESEAGQLEAPWPVP
GERQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGTQPDSEGPVGSGGWHNGPHVFLSRP
AADSTQSSLLAAQPRPRARAAPFLCPGPSACPGSPEGGLQAGHGALARLLALVLRCLSRG
PWGLVFSGVSFDQANNLLIEPARIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGI
FISRVSEEGPAAQAGVRVGDKLLEVNGVALQDAEHQQAVEALRGAGTTVHVRLWRERMVE
PENAVTVTPLRPEDDYSPRERWGGGLRPRPRQPEPPGPLRQRRVACLVRSDKGLGFSIAG
GKGSTPYRAGDPGIFISRIAEGGAAHRAGTLQVGDRVLSIDGVDVTEARHDHAVSLLTAA
SPTIALLLEREAGGPLAPGTPPHSPPPPAATTTTMATANPGEPGPLRLAPSLLAAALEGP
YPVEEICLPRAGGPLGLSIVGGSDHSSHPFGVQEPGVFISKVLPRGLAARSGLRVGDRIL
GVNGQDVRDATHQEAVSALLRPCLELVLLVRRDPPPPGMRELCIQKAPGEKLGISIRGGA
KGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS
VGDTLTVLVCDGFDASAPEVSPGIIANPFAAGIGRRNSLESISSIDRELSPEGPSKEKEL
PGQTPQWGPEAVGRSLESLRLDCRALAATPSTGSVQRVPSGASGGKMTEAPCSPGHQQVS
AHGGGGWRTPGAAVCRAPSSGKGVARGQRLPPAAIRHSGSPVLLRGEGQAVGTPLSPGGR
PPTPGPTASPEQLSFRERQKYFELEVRVPQTGGPPKRVSLVGLRRMKSLEQDALRAQMVL
SKSQEGRSKRGPLERLAEAPSPAPTPSPTPLEDLGLQTGTSPGRLALSGRKFDYRVFAAL
PSSRPVYDMQSPDFAEELRSLEPSPSPGLPEEDGEVAMVLLGRPSPGTAGPEEVALCSSR
RAMRPGRRGLGPVPS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatcccgctgtggcgctgcaaccggcacgtggagtcggtggacaagcgg
cactgctcactgcaggccgtgcccgaggagatctaccgctacagccgcagcctggaggag
ctgctcctcgacgccaaccagctgcgtgagctgcccaagcccttctttcggctgctgaac
ctgcgcaagctgggcctgagtgacaacgagatccagcggttgccccctgaggtggccaac
ttcatgcaactggtggagctggacgtgtctcggaatgacatccctgagatccccgagagc
atcaagttttgcaaggccctggagattgcagatttcagtgggaatcctttgtccaggctc
cccgaaggtttcactcagctgcgcagcctggctcatctggccctgaatgatgtgtctttg
caggcgctgcctggggatgtgggcaatctcgccaacctggtgaccttggagctccgggag
aatctgctcaagtccttgcctgcgtccttgtctttcctggtcaagctggaacagctggat
ctgggaggcaacgatctggaagtgctgccagacaccctgggggccctgcccaacttgcgt
gagctgtggctggaccggaaccagctgtcggccctgcccccggaactcgggaatctgcgg
cgcctggtgtgcctggatgtgtcggagaaccggctggaggagctgcctgcggagctcggg
gggctggtgctgctcaccgacctgctgctttcgcagaactggctgcagcggcttcctgac
ggcattggtcagctgaagcagctgtccatcttgaaggttgaccagaatcgcctctgcgag
gtgacggaggccattggggactgtgagaacttgtcagagctgatcctcactgagaacctg
ctgacggccctgccccgctccttggggaagctgagcaagctgaccaacctcaacgtggac
cggaaccgcctggaggcactgccgcctgagatcgggggctgcatggcactcagcgttctc
tctctgagggacaaccgcctggcggtcctgccgccggagctcgcccacacggccgagctg
catgtgctggacgtggccgggaaccgtctgcagagtctgccgttcgcactcacgcacctc
aacctaaaggccctgtggctggcggagaaccaggcgcagcccatgcttcggttccagact
gaggacgacgcccagaccggcgagaaggtgctcacctgctacctgctgccccagcagccc
ccgctcagcctcgaggacccggggccgaggagcagcccttcggagagctggggtgatgcc
ccgctcggccgcgtcagtgtcatccagttcctagaggcccccgcgggcgacgaggacgca
gaggaggctgctgccgagaaacggggcctgcagcgtcgggctacgcctcaccccagcgag
ctcaaggtgatgaagaggggtgtagagcgtcgaagcgaagccacctcctgcaggcccgac
tccacgcagcactcaccctcacccccgccctcggaggaggagaagaggctgagcaccgag
tctggcctgagtgcggacttgcacctgtctgccagcacagcctcccagggtgagcccgag
ggcctgctggcggaggaggaggagccgagccagcaggaatccacgccaacctcccaggag
gaggtcacagaggagacctatgaggagcccacggtgcgcttcgcggaggacacgctgctc
ctgcccagggaggatggcgagagcgaggcggggcagctggaggccccctggcccgtgccg
ggtgagaggcagcggctcatccgcaaggacacgccccactacaagaagcacttcaagatc
tccaagctgccccagcccgaggccgtggtggcgctgcttcaggggacacagccagacagt
gagggcccagtagggtccgggggctggcacaacggcccccacgtgttcctctccaggccg
gctgctgattccacccagagctccctgctggccgcgcagccccgtcccagggctcgggcg
gccccttttctctgcccgggtccctctgcctgccctggctctcctgagggcggccttcag
gccggccatggggccctcgcccgcctccttgccctggtcctcaggtgcctctcacggggc
ccctggggtctggtcttctccggggtgtcgtttgaccaggccaataacctgctgatagag
cccgctcgcattgaggaggaagagctgacgctcaccatcgtgcggcagacggggggcctg
ggcatcagcatcgcgggcggcaagggctccacgccctacaagggtgacgacgagggtata
ttcatctcccgggtatctgaggagggccctgcggctcaggctggggtccgagtaggcgac
aagctcctcgaggtgaacggcgtggccttgcaggacgccgagcatcaacaggccgtggag
gcgctgcgtggcgcgggcaccaccgtgcacgtgcggctgtggcgggagcgtatggtggag
cccgagaacgcggtcaccgtcacgcctctgaggcctgaggacgactacagcccccgggag
cggtggggaggcgggctgcgcccgcgcccgcgccagcccgagccgccagggcccctccgc
cagcgtcgcgtggcctgcctcgtgcgcagcgacaagggcttgggcttcagcatcgctggg
gggaaaggctccacaccctaccgggctggagacccgggtatcttcatctcccgcattgct
gaggggggcgccgcccaccgggcgggcaccctacaggtcggcgatcgcgtcctctccatc
gacggggtggatgtgacggaggccaggcacgaccacgccgtctccctgctgaccgctgcc
tctcccaccatcgccctgctgctggaacgggaggccggggggccgcttgcccctggtact
ccgccacactcacccccaccccctgctgctaccaccaccaccatggccactgccaaccct
ggggagcccgggccgctaaggctggcccccagtctgctggccgctgccctggaggggccg
tacccagtggaggagatctgtctgccgagagctgggggccccttggggctcagcatcgtc
gggggctccgaccactccagccacccatttggcgtccaggagcccggcgtgttcatctct
aaggtgctcccccggggcctggctgcacgcagtggcctgcgggttggggaccgcatcctg
ggagtgaatgggcaggatgtgcgggacgccacccaccaggaagcggtcagtgccctgctg
cggccctgcctcgagctggtcctgctcgtgcggagggacccgccgcccccgggcatgcgg
gagctctgtatccagaaggcccctggggagaagctgggcatcagcatccggggcggcgcc
aagggccacgcagggaacccctgtgaccccacggacgagggcatcttcatctccaaggtg
agccccacaggagcggccgggcgagatggtcgcctgcgggtggggctgcggctgctggag
gtgaaccagcagagcttgctgggcttgacgcacggcgaagccgtgcagctgctacgcagc
gtgggcgacaccctgactgtgcttgtctgtgacggcttcgacgccagcgcccccgaggtg
tccccgggcatcatcgccaacccctttgcagcaggcattggccgccggaacagcctggaa
agcatctcctccatcgaccgggagctgagccccgagggccccagcaaggagaaggagctg
cctggacagaccccacagtgggggccggaggccgtgggtcggagcctggagagcctgagg
ctggactgccgcgccctggccgccacacccagcaccggcagtgtgcagagggtaccgtct
ggggcaagtggcgggaagatgactgaggccccctgttcccctggccaccagcaggtgagt
gcacacgggggtggggggtggaggactccgggggctgctgtctgcagagccccctcctct
gggaagggggttgccaggggacagcgcctccccccagctgccatccgtcactcaggctcc
ccggttctgctgcgtggggagggccaggccgtgggcacccccctctcgcctggtggcagg
ccccccacgcctgggcccacggcctccccggagcagctgtccttccgcgagcggcagaag
tacttcgagctggaggtgcgggtgccccagaccgggggcccccctaagcgcgtgtcgctg
gtggggctccgcaggatgaagtctctggaacaggacgctctccgtgcacagatggtcctc
agcaagtctcaggagggtcgaagcaagcgggggcctctggagcgcctggccgaggccccc
tcgcccgcgcccaccccgtcacccacccccttggaagacctcggcctccagaccggcacc
tccccgggacgcttggccttgtctgggaggaagtttgactacagggtgtttgcagccctc
ccctcttccagacctgtctatgacatgcagtccccagattttgctgaggagctgaggtcc
ttggaaccatctccgagccctggtctgccagaggaggatggagaggtggccatggtgctt
ctgggcaggccttcgccgggcaccgcgggccccgaggaggtggccctgtgcagcagccgc
cgcgccatgcggccggggcgccggggcctgggcccggtgccctcctag
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