Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112397293
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Entry
112397293 CDS
T08872
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nasi03009
]
112397293 (DDX54)
Enzymes [BR:
nasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112397293 (DDX54)
Ribosome biogenesis [BR:
nasi03009
]
Eukaryotic type
Pre-60S particles
Helicases
112397293 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
112397293
NCBI-ProteinID:
XP_024597212
UniProt:
A0A341B6I0
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MAAGTRPAAAPRSRAAMAQWRKKKGLRKRRGAASQSRSSDSEDGEFEIQAEDDARAQKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLMEPVLIR
LDVDSKLNEQLKTSFFLVREDAKAAVLLHLLRSLVRPQDQTVVFVATKHHAEYLSELLTT
QRVSCAHIYSALDQTARKINLAKFMHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLAHPHEEPSGAGGGDGVL
GRVPQGVVDDEDCGLRTSLETSLELRGLGRVADNAQQQYVRSRPAPSPESIRRAKELDLS
GLGLHPLFSSCFQEEELQQLRLVDSIRNYRSRATIFEINASSRDLSSQVMRAKRQKDRKC
IASFRQKRQERQEGPAVPASSLPAPQEQQPEKEEAAGDSVEDLFTEVVGRKRQQPGPDRG
AKRRREEARQRDQVFYIPYRPKDFDSERGLSIGGDGGVFEQQVAGAVLDLMGDEGQSLTK
GQQQLKWDRKKKRFVRQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEEE
GTFERRGPERRGGKRGRGQGASQPRTLGAPTGHVRSELKTKQQILKQRFRAQKLRFLQRG
GLKQLSARNRRRARELQQGAFGRGAHSKKGKMRKSL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggaacgcgtccggcggccgcaccgcggtcccgagctgccatggcccagtgg
aggaagaagaaggggctccggaagcgccggggcgcggcctctcagtcccgcagcagcgac
tcggaggacggcgagtttgagattcaggcagaagatgacgcccgggcccagaagctggga
cccggcagacccctacccaccttccccacctcggaatgcacctcggacgtggagccggac
acacgggagatggtacgagcccagaacaagaagaagaagaagtcgggaggcttccagtcc
atgggcttgagctacccagtgttcaaaggcatcatgaagaagggctacaaggtgccaaca
cccatccagaggaagaccatcccagtgatcctggatggcaaggatgtggtagccatggcc
cggacaggcagtggcaagacggcctgcttcctcatccccatgtttgagaggctcaagacc
cgcagcgcccagaccggggcccgcgccctcatcctctcacccacccgagagctggccctg
cagaccatgaagttcaccaaggagctgggcaagttcactggcctcaagactgccctgata
ctgggcggggacaagatggaagaccaatttgcagccctgcacgaaaatcccgacataatc
attgctacccctgggcgcttggtgcatgtggctgtggagatgaacctaaagctgcagagc
gtggaatatgtggtatttgatgaggctgacaggctctttgaaatggggtttgcagagcag
ctgcaggaaatcattgcccgcctccctgggggccaccagactgtcctgttctctgccacg
ctgcccaagctgctggtggagttcgcccgggctggcctcatggagcccgtgctcatccgg
ctagacgtggactccaaactcaacgaacagctcaagacctccttcttcctcgtgcgggag
gatgccaaggctgctgtgctgctccacctgctgcgcagcctggtgcggccccaggaccag
acagtggtatttgtggccaccaagcaccacgcggagtatctcagtgagctgctgacgacc
cagcgggtgagctgcgcccacatctacagcgccctggaccagacggcccgcaagatcaac
ctggccaagttcatgcacggcaagtgctcggccctcatcgtgactgacctggcagcccgg
ggcctggacatcccactgttggacaacgtcatcaactacagcttccccgccaagggaaag
ctcttcttgcaccgcgtgggccgtgtggcccgagctggccgaagcggcacggcctactcc
ttggtggccccagatgaggtcccctacctactggacctgcacctgttcctgggccgtgcc
ctgaccctcgcccatccccatgaggagccctccggcgcgggcggcggggacggcgtgctg
ggccgggtgccgcagggcgtggtggacgatgaggactgcggtctacggaccagcctggag
acatcgctggagcttcggggcctgggccgcgtggccgacaacgcccagcagcagtatgtg
cgctcacggccggcgccctcacccgagtccatcaggagggccaaggagctggacctctcg
ggcctgggcctgcaccccctcttcagctcgtgcttccaggaggaggagctgcagcagctg
cggctggtggacagcatcaggaactaccgctcccgggcgaccatctttgagatcaacgct
tccagccgggacctgagcagccaggtgatgcgtgccaagcggcagaaggatcgcaaatgc
atcgccagcttccggcagaagcggcaggagcggcaggagggcccggccgtcccagcctcg
agcctcccagcaccgcaggagcagcagcctgagaaggaggaggcggcaggagacagtgtg
gaggacctcttcacagaggtcgtgggccggaagcggcagcagccaggacccgaccgagga
gccaagaggcggcgggaggaggcccggcagcgggaccaggtgttctacatcccctaccgg
cccaaggacttcgacagtgagcggggcctgagcatcggtggggacgggggtgtcttcgag
cagcaggtggctggcgctgtcttggacctgatgggggacgaaggccagagcctgaccaag
ggccagcagcagctcaagtgggatcggaagaagaagcggtttgtgagacagtcgggacag
gaggacaagaaaaagatcaagacggagagtggccgctacatcagcagctcctacaagagg
gacctctaccaaaagtggaaacagaagcagaaaattgatgatcgtgactcagaagaagaa
gggacatttgaacggcgtggcccagagcgaagaggtggtaagcgcggccgagggcaaggt
gcatcacagccccgcacccttggtgccccaacaggccacgtgcgctcagagctcaagacc
aagcagcagatcctgaagcagcggttccgagcccagaagctgcgcttcctgcagcgtgga
ggcctcaagcagctctctgcccgcaaccggcgccgcgcccgggagctgcagcagggcgcc
ttcggccgcggcgcccactccaagaagggcaagatgaggaagagcctgtaa
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