Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112397680
Help
Entry
112397680 CDS
T08872
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112397680 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nasi00536
]
112397680 (COL25A1)
Glycosaminoglycan binding proteins [BR:
nasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112397680 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
112397680
NCBI-ProteinID:
XP_024597710
UniProt:
A0A341B4H5
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MLVKKQAGKGGGREPGSEDRSPAGQRCARTVSPCAALTALLSVVAVISCLYLGVKTNDLQ
ARIAALESAKGDPSIRLLPDCLDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPEGPRGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
SPGQKGSVGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGQPGERGEKGDAGENGPKGDTG
EKGDPGSSAAGVKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGDRGEAGHPGRGDRGEPGAPGPKGKQGESGTRGPKGSKGDRGDKGDSGALGPRGPPGQK
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGVPGVDGEQGL
KGSKGDMGDPGMPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP
GPRGEKGDLGEKGEKGEKGKKGKKGPKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcaagcagggaaaggaggggggcgggagccgggctccgaggaccgg
agcccagccgggcagcgttgtgcccggaccgtgtccccgtgcgccgccctgaccgccctc
ctgtcagtagtggccgtgatatcttgtctgtacctgggggtgaaaaccaacgacctccag
gcgaggatcgccgccctcgaatccgccaaaggagacccttccatccgtctgctgcctgat
tgtctggatcagctcaaagcaatggtgcaggagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaatcgcaagagaagcaccttcagagtgcaactgc
ccagcaggccctccggggaaacgaggtaaaaggggccgaagaggagaatctggtcctcct
ggtcagcctggtcctgagggccctcgtggtccaaaaggtgataagggcgaacagggtgat
cagggacctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctcattaagggtgaccaaggacaggctgggcctccaggccctcca
ggacctccaggcccacgagggcctcctggggacacagggaaagatggcccccgcggaatg
ccaggagtgcctggtgaaccagggaaaccgggagaacaaggcttgatgggtcctctgggg
tctccaggacaaaagggttctgttggagcacctggaattccagggatgaatgggcaaaag
ggtgaacccgggttgcctggagcagtaggacagaatggaataccagggccaaagggacaa
cctggagaacgaggagaaaagggagatgctggagagaatggccccaaaggtgatacaggt
gaaaagggtgaccctggatcgtccgctgcaggagttaagggagagcccggagaatctggt
cgtccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcaaggagaaccaggcttaccagggttaccaggaaca
aagggcgaccgtggggaggcagggcatcctggaagaggggatcgaggggagcctggagcc
cctggaccaaaggggaaacaaggtgaatcaggaactagaggcccaaaggggtctaagggt
gaccgtggagacaaaggggactctggagccctgggaccaaggggtccacctggtcaaaag
ggagatcaaggagccaccgagatcatagactacaacggcaacctccacgaagccttgcag
aggattaccaccttaacagtcacgggtccccctggaccacctggacctcaaggactacaa
gggccaaagggagagccaggatctccaggagtcccaggagttgatggagagcagggactc
aaaggttcaaagggagacatgggggacccaggtatgccaggtgaaaaaggaggaattgga
cttcctggattaccgggtgccaatggaatgaaaggagaaaaaggagactcgggattgcca
ggtcctcagggtccttccatcataggcccaccaggcccaccaggtccccatggcccacca
ggccccatgggaccccatggacttcctggaccaaagggtacagatggccctatgggaccc
catggccccgcaggtcccaaaggagaaagaggtgaaaaaggagctatgggagagccggga
ccccgaggaccgtatggtcttcccgggaaagatggagagcctggtcttgatggtttccct
ggtccacgaggcgagaagggtgatctaggagaaaagggggaaaagggggaaaagggaaag
aaaggcaaaaaggggcctaaaggggagaaaggagaacagggtgctcctggattagatgca
ccctgcccgttggggccagatggattacccatgcccggctgttggcaaaagtga
DBGET
integrated database retrieval system
