Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112397872
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Entry
112397872 CDS
T08872
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112397872 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nasi03400
]
112397872 (UIMC1)
DNA repair and recombination proteins [BR:
nasi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
112397872 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
DUF7385
zf-WRNIP1_ubi
UIM_2
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
112397872
NCBI-ProteinID:
XP_024597927
UniProt:
A0A341B8B7
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MKTKQLNRAKCLAKRKIAQMTEEEQFALAVKMSEQEAREVNSQEEEEEELLRKAIAESLN
SCRPSDASATRSRPLAAGPSSQSHQEKTTDSGTTEGMSPCSGSFSSSITISQGYHAESRY
TEMSRIPLVVLKRLNQKVVEISLISSILLSPRKSQLLVKPKEEPFFYPLYVILDNLPSPL
NKKWFVLSPTFSQIPTGIWQLVPPSLFKGSHISQGNESEEREEPWDRTENTEEEPVSGSS
GSWDQSSQPVFENENVKCFDRCTGHLAERTQCGKPQESTGKGCAFHKAAQGRGDTSRHCL
PTPADAKGLQDIGGTVHYFWGIPFCPAGVDPNQYTKVILCQLEVYQKSLKMAQRQLLKKK
GFGEPVLPRPPSLIQNECGQGDQASEKNERISEDMGDEDKEERQESRASVWHSKTKDFQE
SPIKSLKEKLLLEEEPTTSHGQSSQGLFVEETSEEGNSVPAPQSIAALNSKRSSVLMPES
SAEEITVCPETQLSSPETFDLEKEDFPGSRETVDEVRIMADKEVLQVDNREDAEKEIPTT
TFSSSTQVSCPLCDQGFPPTKIERHAMYCNGLMGQDTVLTRRQKETKRKSKSESGTAAQI
SLDIDKKKASVKADSLVSWNSLSTRLQMQR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaacagttgaatagagcaaagtgtttggctaaaagaaaaattgcacaaatg
acagaagaagaacagtttgctctggctgtcaaaatgagtgaacaggaagctagggaggtg
aacagccaggaggaggaagaagaggagctcttgaggaaagccattgctgaaagcctgaat
agttgccggccttctgatgcttctgctaccagatctcgacctctggccgctggaccatct
tcacagtcccaccaagagaaaaccacagactctgggaccactgaaggcatgtctccctgt
tctggctccttctcatcaagtataaccatatcacagggatatcatgctgagagtagatat
acagaaatgtccagaatccctttggtggtattaaagaggttaaatcagaaagtagttgag
atctcactaatatccagcatacttttatctccaaggaaaagccaacttttggttaaaccc
aaagaagagccttttttttacccactttatgtaattcttgataacttaccaagccctctt
aataaaaaatggtttgtccttagccctactttttctcaaatacctacaggcatatggcag
ctggtacctccatcactgtttaaaggctcacatatcagtcagggaaacgagtctgaggaa
agagaggagccttgggaccgcactgaaaacactgaagaggagccggtctctggcagctca
ggaagctgggaccagtcaagccagccagtgtttgagaatgagaacgttaaatgttttgac
agatgtactggccacttggctgagcgcacacagtgtgggaagccacaggaaagtactggg
aagggttgtgcttttcacaaagctgcccagggtaggggggacacatctaggcactgtttg
cctaccccagcagatgccaaaggtctccaggacattgggggcactgtgcactacttctgg
ggtattccattctgccctgctggagtagaccctaaccaatataccaaggtcattctctgc
cagttggaggtttatcaaaagagcctgaaaatggctcagaggcagctcttaaaaaaaaag
gggtttggggaaccagtgttacctagacctccttctctgatccagaatgaatgtggccaa
ggagatcaggctagtgaaaaaaatgaacgcatctcagaagatatgggagatgaagacaaa
gaggagaggcaggagtctagggcatctgtctggcactcaaaaaccaaggatttccaagaa
agcccaattaaaagcttgaaagagaaacttttgttggaggaagaaccaacaaccagtcat
ggtcagtcttcccaagggctgttcgttgaagaaacttctgaagaaggaaattctgtacct
gccccacagagcattgctgctttgaacagtaagagaagctcagtccttatgccagagagt
tctgcagaggaaatcactgtgtgtcctgagacacagctaagttcccctgaaacttttgac
cttgaaaaagaagactttccaggtagcagagagaccgtggatgaagtaagaataatggca
gataaggaggttcttcaggttgataacagggaagatgctgagaaggaaatacctactact
accttctcatctagtacccaggtatcctgcccactatgtgaccaaggcttcccacccaca
aagatcgagcgacatgccatgtactgcaatgggctgatgggtcaagatacagtgttgact
cggagacaaaaagagactaagagaaagagcaagagtgagagtgggacagctgctcagatt
tccctagacattgacaagaaaaaggcttcagtgaaggccgactccttagtctcttggaac
agtctgagtacaagactacagatgcagagataa
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