Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112397877
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Entry
112397877 CDS
T08872
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03015
mRNA surveillance pathway
nasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112397877 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
112397877 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112397877 (PABPC5)
03041 Spliceosome [BR:
nasi03041
]
112397877 (PABPC5)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112397877 (PABPC5)
mRNA cycle factors
Stress granule specific factors
112397877 (PABPC5)
Spliceosome [BR:
nasi03041
]
Complex C
Other components
Complex C specific factors
112397877 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
112397877
NCBI-ProteinID:
XP_024597946
UniProt:
A0A341B514
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGSILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDETIDDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVDE
MNGRIVGSKPLHVTLGQARRRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggggagcctaatcctgctggcaagaaaaagaagtacctcaaggctgccctg
tatgtgggtgacttggacccagatgtcaccgaggacatgttatataaaaagttcaggcct
gctggccctcttcgcttcacccgaatctgccgtgacccggtgacccgcagccccctgggc
tatggttatgttaacttccgctttcctgcggatgctgagtgggccttgaacaccatgaat
tttgatttgattaacggcaaacctttccgcctaatgtggtctcagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaaaaacctggacaaatccatagacaatagg
gcccttttttatctgttttctgcttttgggagcattctctcctgcaaggtagtatgcgat
gacaacggctctaagggttatgcctatgtgcactttgacagcctggccgctgccaatagg
gccatctggcacatgaatggagtgcggctcaacaaccgccaggtgtacgttggccgattc
aaatttccggaagagcgggcagctgaagttagaactagggatagagcgactttcaccaat
gttttcgttaaaaactttggagatgacatggatgacgacaaactgaaggaacttttcagt
gaatacgggccaactgagagtgttaaggtaataagagatgccagtgggaaatcgaaaggc
tttggatttgtgagatacgagacacacgaggctgcccaaaaggctgtgttagacctgcat
ggaaagtccatcgatgggaaagtcctctatgtagggcgagcacagaagaaaattgaacgc
ctggctgagttaaggcgaagatttgagcggctgagattaaaagaaaaaagtcggcctcca
ggggtgcctatctatattaagaacctagacgagaccatcgatgatgaaaaactgaaggag
gaattttcttcctttggatcaattagccgggccaaagtgatggtggaagtggggcaaggc
aaagggtttggtgttgtctgcttctcctcttttgaagaggctaccaaagcagtagatgag
atgaatggtcgcatagtgggctccaagcctctgcatgtcacgctgggccaggccaggcgc
aggtggtga
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integrated database retrieval system
