KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112398027
Entry
112398027         CDS       T08872                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03082  ATP-dependent chromatin remodeling
nasi03083  Polycomb repressive complex
nasi04110  Cell cycle
nasi04213  Longevity regulating pathway - multiple species
nasi04330  Notch signaling pathway
nasi04350  TGF-beta signaling pathway
nasi04613  Neutrophil extracellular trap formation
nasi04919  Thyroid hormone signaling pathway
nasi05016  Huntington disease
nasi05031  Amphetamine addiction
nasi05034  Alcoholism
nasi05165  Human papillomavirus infection
nasi05169  Epstein-Barr virus infection
nasi05200  Pathways in cancer
nasi05202  Transcriptional misregulation in cancer
nasi05203  Viral carcinogenesis
nasi05206  MicroRNAs in cancer
nasi05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    112398027 (HDAC1)
   03083 Polycomb repressive complex
    112398027 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    112398027 (HDAC1)
   04350 TGF-beta signaling pathway
    112398027 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    112398027 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    112398027 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    112398027 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    112398027 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    112398027 (HDAC1)
   05202 Transcriptional misregulation in cancer
    112398027 (HDAC1)
   05206 MicroRNAs in cancer
    112398027 (HDAC1)
   05203 Viral carcinogenesis
    112398027 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    112398027 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    112398027 (HDAC1)
   05165 Human papillomavirus infection
    112398027 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    112398027 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    112398027 (HDAC1)
   05034 Alcoholism
    112398027 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nasi03036]
    112398027 (HDAC1)
Enzymes [BR:nasi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112398027 (HDAC1)
Chromosome and associated proteins [BR:nasi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     112398027 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     112398027 (HDAC1)
    BRAF-HDAC complex
     112398027 (HDAC1)
    REST complex
     112398027 (HDAC1)
    SHIP complex
     112398027 (HDAC1)
    MiDAC complex
     112398027 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     112398027 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    112398027 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    112398027 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 112398027
NCBI-ProteinID: XP_024598161
UniProt: A0A341B5R3
LinkDB
Position
Unknown
AA seq 419 aa
MTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK
LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV
EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP
VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY
TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK
QRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEFSDS
DEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKQEAKGVKEEVKLA
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaccaagtaccacagtgatgactacattaaattcttgcgctccatccgcccagataac
atgtctgagtacagcaagcagatgcagagatttaacgttggtgaggactgtccggtattt
gatggcctctttgagttctgtcagctatctactggtggctctgtggcaagtgccgtgaaa
cttaataagcagcagacggacatcgctgtgaattgggctgggggcctacaccatgcaaag
aagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatcctggaactg
ctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggcgatggcgtg
gaagaggccttctataccacagaccgagtcatgactgtgtcctttcataaatatggagag
tacttcccaggaactggggacctacgggatattggggctggcaaaggcaagtattatgct
gtgaactacccgctccgagatgggattgatgatgagtcctatgaggccattttcaagccg
gtcatgtccaaagtaatggagatgttccagcccagtgcagtcgtcttacagtgtggctct
gactccttgtctggtgatcggttaggttgcttcaatttgaccatcaaagggcacgccaag
tgtgtggaatttgtgaagagcttcaacctgcctatgctgatgctgggaggaggtggctac
accattcgtaatgtcgcccggtgctggacatacgaaacagctgtggccctggacacagag
atccctaatgagcttccatacaacgactacttcgaatactttggaccagatttcaaactt
cacatcagtccttccaatatgactaaccagaacactaatgagtacctggaaaagatcaaa
cagcgactgtttgagaacctgagaatgctgccccacgcgcctggggtccaaatgcaggcc
attcctgaggatgccattccagaggagagtggcgatgaggatgaagaagaccctgacaag
cgcatttcaatctgttcctcggacaaacgaattgcctgtgaggaagagttctccgactct
gacgaggagggagaaggcggtcgcaagaactcttccaacttcaaaaaagccaagagagtc
aaaacagaggatgagaaagagaaagacccagaagagaagaaagaagtcacagaagaggag
aaaaccaaggaggagaagcaagaagccaaaggggtcaaggaggaggtcaagttggcctga

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