Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112398279
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Entry
112398279 CDS
T08872
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nasi04040
]
112398279 (TRPM1)
Ion channels [BR:
nasi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112398279 (TRPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
RraB
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
112398279
NCBI-ProteinID:
XP_024598501
UniProt:
A0A341B6Q2
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MYFRRRCLRGQWHLAVSPEAALQQLPQSEHHPEGQKSWIEKTFCKRECIFVIPSTKDPNR
CCCGQLTNQHIPPLPSVTASKNGEENKQVETQPEKWSVGKHTQSYPTDSYGILEFQGGGY
SNKAMYIRVSYDTKPDSLLHLMVRDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIK
AAVTTGAWIFTGGISTGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLVGRDVA
RVYQTMSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVMLRRQLEKHISLQKINTRLGQG
VPVVGLVVEGGPNVVSMVLEYLREEPPVPVVVCDGSGRASDILSFAHKYSEEGGIINDSL
RDQLLVTIQKTFNYNKTQSHQLFAMIMECMKKKELVTVFRMGSEGQQDIEMAILTALLKG
TNASARDQLSLALAWNRVDIARSQIFVFGPRWPPLGSLAPPTDSKVMEKEKKPPTATTKG
GRGKGKGKKKGKVKEEVEEETDPRKLELLNWVNALEQAMLDALVLDRVDFVKLLIENGVN
MQHFLTIPRLEELYNTRLGPPNTLHLLVRDVKKGNLPPDYHISLIDIGLVLEYLMGGAYR
CNYTRKGFRTLYNNLFGPKRPKALKLLGMEDDEPPAKGKKKKKKKKEEELDIDVDDPAVS
RFQYPFHELMVWAVLMKRQKMAVFLWQRGEESMAKALVACKLYKSMAHESSESELVDDIS
QDLDNNSKDFGQLAVELLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAH
TCSQMLLTDMWMGRLRMRKNPGLKVIMGILLPPTILFLEFRSCDDFSYQTSKENEDGKEK
EEENMDANADTGSRKGDEENEQKKQRSVPIGTKICEFYNAPIVKFWFYTISYLGYLLLFN
YVILVRMERWPCLQEWIVISYIVSLALEKIREILMSEPGKLSQKIKVWLQEYWNITDLVA
ISMFMIGAILRLQKQPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDM
LYFVVIMLVVLMSFGVARQAILHPDEEPSWKLARNIFYMPYWMIYGEVFADQIDLYAMEI
NPPCGDNQYDEEGKRLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSIS
NQVWKFQRYQLIMTFHDRPVLPPPMIILSHVYIIIMRLSRHCRKKREGDQDEQDRGLKLF
LSDEELKRLHEFEEQCVREHFQEKEDEQQSSSEERIRVTCERVENMSMRLEEINERENFM
KTSLQTVDLRLSQLEELSSRMVNALENLAGIDKSDLVQTRSRASSECDATYLLRQSSINS
ADGYSMYRYLFNGEELYEDTSRCMPPGTGFRKKVGSFRVKEEKDQRTHLVPERQGSLRLP
PSTSTPASPDGDRLASDNVKSTSGPKLGPDVGISAEDDERQADSKRGETSSPGFSQTDVM
HGQNNSDFQSTQLTVETTKIEGTISYPLEETKVTHYYPDETFSACRAMKSRSFVCSRGRK
LVGGVNKWSAVGDQTCPSTVEQWTTEWRYQVQKIMRSQSTDIPSFGSETAVQAEHQGHFT
DTEDENCVSETGPQISRLSLAVTDRTDKENLLSVKTHQTLGFPSLRSKSLHGHPRNAKAI
QGTLDRSRHASSVSNLAVVSRITTEDLKVKREKNSSETEC
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcagaagaagatgtttaaggggtcagtggcacctcgctgtctccccggaggca
gccctacaacagttgccgcagtcagagcaccaccccgagggacagaaatcttggatagaa
aaaaccttttgcaaacgagaatgtatctttgtaattcccagcactaaagatcctaacagg
tgttgctgtggccagctcaccaaccagcatatcccccctctgccgagtgtaacagccagc
aaaaatggagaggagaacaagcaggtggagactcagcccgaaaaatggtctgttggcaaa
cacacccagagctacccaacagattcctatgggattctcgaattccagggtggcggatac
tccaataaagccatgtatatccgggtctcctatgacacgaagccagactcactgcttcat
ctcatggtgagagactggcagctggaactccccaagctcttaatatccgtgcacggaggc
ctccagaactttgagatgcagcccaagctgaagcaggtctttgggaaaggtctgatcaag
gctgctgtgaccactggggcctggatcttcactgggggcatcagcacaggtgtcatcagc
cacgtgggggatgccttgaaagaccactcctccaagtccagaggccgggtttgtgctata
ggaattgctccctggggcatcgtggagaataaagaagatctggttggaagggatgtggca
cgggtgtaccagactatgtccaaccccctgagtaagctgtctgtgctcaacaactcgcac
acgcacttcatcctggctgacaatggcaccctgggcaagtatggtgccgaggtgatgctg
agaaggcagctggagaagcacatctctctgcagaagatcaacacaagactggggcagggt
gtgcccgtcgtgggcctcgtggtggaagggggcccgaacgtggtttccatggtcctggag
tatctccgagaagagcctccggtccccgtggtggtctgcgacggcagtggccgggcctcg
gacatcctgtcttttgcacacaagtactctgaagaaggagggataatcaatgactccctc
agagaccagcttctagttaccattcagaaaacatttaattacaacaagacacaatcgcat
cagctctttgcgatgatcatggagtgcatgaaaaagaaagaacttgtcactgtgtttaga
atgggttccgagggtcagcaagacatcgaaatggcaattttaaccgccctgctgaaaggc
acaaacgcatcagctcgggaccagctgagcttggcgctggcttggaaccgcgtggacata
gctcggagccagatctttgtctttgggccccgctggccgcccctgggaagcctggccccc
ccaacggatagcaaggtcatggagaaggagaagaagccacccacagcgaccaccaagggg
ggcagaggaaaaggaaaaggcaagaagaaagggaaggtgaaagaggaggtggaggaagaa
actgacccccgaaagctcgagctgctgaactgggtgaacgctctggagcaggccatgttg
gacgcgctggtcttagaccgagtggactttgtgaagctcctgattgaaaatggagtcaac
atgcagcattttctcaccatcccgaggctggaagagctttataacaccagactgggtcca
ccaaacacacttcatttgctggtgagggatgtaaaaaagggcaaccttccacccgattac
cacatcagcctcatagacattgggctcgtgctggagtacctcatggggggcgcctaccgc
tgcaactacacaaggaagggcttccggaccctttacaacaacctgtttggacccaagagg
cctaaagctctcaaacttctgggaatggaagatgatgagcctccagccaaagggaagaaa
aagaagaagaagaaaaaggaggaggagttggacatcgatgtggatgaccccgccgtgagt
cgattccagtaccccttccacgagctgatggtgtgggctgtgctgatgaaacgccaaaaa
atggcagtcttcctctggcagcggggggaggagagcatggcgaaggctctggtggcctgc
aagctctacaagtcgatggcccacgagtcctccgagagtgagctggtggacgacatctcc
caggacctggacaacaactcaaaagactttggccagcttgctgtggagctcttggaccag
tcctacaagcatgatgagcagatcgccatgaaactgctgacctacgagctgaaaaactgg
agcaactcgacctgcctcaaactggctgtcgcagccaaacatcgggacttcatcgcccac
acctgcagccagatgctgctgactgacatgtggatgggaaggctgcggatgaggaagaac
cctggcctgaaggttatcatggggattcttctccccccgaccatcttgtttttggaattt
cgcagctgtgatgacttctcatatcaaacatccaaggaaaatgaagacggcaaagaaaaa
gaggaggagaatatggatgcgaatgcagacactggctcgagaaagggggacgaggagaat
gaacaaaaaaagcaaagaagtgttcccatcgggaccaagatctgtgaattctacaacgct
cctattgtcaagttctggttttacacgatatcttacctgggttacctactgctgttcaac
tacgtcatcctggtgcggatggagcgctggccctgcctccaggagtggatcgtcatctcc
tacatcgtgagcctggccctggagaaaattcgggagatccttatgtcagaacccggtaaa
ctcagccagaaaataaaagtttggcttcaggaatattggaacatcacagacctcgtggcc
atttccatgttcatgattggagccatcctccgcctacagaagcagccctacatgggctat
ggccgcgtgatctactgcgtggatatcatcttctggtacatccgtgtcctggacatcttt
ggtgtcaacaagtatctgggaccctacgtgatgatgatcggaaagatgatgattgacatg
ctgtattttgtggtcatcatgctggtggtgttgatgagtttcggggtagcccgtcaagcc
attttgcatccagatgaggagccttcttggaaactggcccgaaacatcttctacatgccc
tactggatgatctacggagaggtgtttgcagaccagatagacctctacgccatggaaatc
aatcctccttgtggtgacaaccagtacgatgaggagggcaagcggctccctccctgcatc
ccgggcgcctggctcacgcccgccatcatggcttgctacctgctagtggccaacatcctg
ctcgtgaacttgctcatcgccgttttcaacaataccttctttgaagtaaagtcaatatcc
aaccaggtgtggaaattccagcgttatcagctgattatgacatttcacgaccggccagtc
ttgcctccaccaatgatcattttaagccacgtctatataatcattatgcgtctcagccgc
cactgcaggaagaaaagagaaggggaccaagacgaacaggatcgtggattgaagctgttt
ctcagcgacgaggagctgaagaggctgcacgagtttgaagagcagtgtgtccgggagcat
ttccaggagaaggaggacgagcagcagtcgtccagcgaggagcgcattcgtgtcacctgt
gagagagttgaaaatatgtccatgaggttggaagaaatcaacgaaagagaaaactttatg
aaaacttccctgcagactgttgaccttcgcctttcccaactggaagaactatctagcaga
atggtgaatgcgctggaaaacctcgcaggaatcgacaagtccgacctggtacagacccgg
tcccgggcttcttctgaatgcgatgcaacataccttctaaggcaaagcagcatcaacagt
gccgatggctacagcatgtacaggtatcttttcaacggggaggagttgtatgaggatact
tcccgctgcatgccaccagggacagggttcaggaaaaaagttggttccttccgtgtgaag
gaagagaaggaccaaagaacgcacctggtcccagagcgtcagggcagccttcgcctgcca
cccagcacaagcacaccagcatccccagatggcgatcgacttgcatcagacaacgtgaag
agcacctcagggccgaaattaggtccagatgttgggatttcagctgaagatgatgaaagg
caggcagactctaagagaggagaaacgagctccccaggtttcagtcaaacagatgttatg
cacggacagaacaattcggattttcaaagcactcagctaacagtggaaacaacgaagata
gaaggcaccatttcttatcccctggaagaaacaaaagtgacccattattaccctgatgag
acgttcagtgcttgtagagcaatgaagtccagaagctttgtatgttcccggggaagaaag
ctggtcggcggggttaacaagtggagtgcagttggggaccaaacatgcccctccacggtt
gagcaatggaccacagagtggaggtatcaagttcaaaagattatgcgttctcagagcacg
gatatcccttcctttgggtctgaaacggcagtgcaggctgagcatcaagggcatttcaca
gacaccgaagatgaaaactgtgtttctgaaacaggccctcagatctcccgtttgtcacta
gctgttactgacagaactgacaaggaaaacttactgtctgtgaaaacacaccaaactttg
ggattcccatctttaaggtcaaaaagtttacacggccatcctaggaatgctaaagccatt
cagggcaccttagacagatctagacatgccagcagtgtaagtaacttagcagttgtgtcc
agaattacaacggaagacctgaaagttaagcgagagaaaaattcctcagaaactgaatgc
tga
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integrated database retrieval system
