Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112398411
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Entry
112398411 CDS
T08872
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nasi03036
]
112398411 (CHD6)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112398411 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
112398411
NCBI-ProteinID:
XP_024598698
UniProt:
A0A341B941
LinkDB
All DBs
Position
Unknown
AA seq
2720 aa
AA seq
DB search
MIMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDHSTDQEDKTEDVARPCLPQKD
LHTAEEDAETLFPRKTTSHNGTEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPREPKEPRKAKEPRKPKEPKEPKQKDGAKKVRKPREASGPKEAKEKRSGPDSAARTK
SKKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEVKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKSEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDCVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGTSDIPERGNTDKEDNTEDKVDGLQKQMESSSDGGDGIFGEKKDDSRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEMFRRSSEMD
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRIISRLDKKSDESLEHYFH
SFVAMCRHVCRLPAWKDGGPPDPSICVEPITEERAARTLYRIELLRKVREQVLQCPQLHE
RLQLCRPSLSLPIWWECGKHDRDLLIGTAKHGLNRTDYYIMTDPQLSFLDAYRNYAQHKR
TDPQAPGSLCCLYQTNSKLYESLAYTQMSRTSESLENEPENLVKIEGRDDHLGPPRGSLS
DMTCENFISKVQDVISITHDESLLPESLESMMYGKKALSQEPVSFQESPGTNTESRQDAV
ALATSRDGSFQPGGHEAEIASGPSFMDTLEAGVAQMNIKNGKHLLVSLSQEGELCCSEAG
QRPESLGQLETKCIASPSLDQGNESGFVDMCNLSVYDSKRNLSSDQQLIDLLECKSLESK
LILGQNHSDEEDEEEENEEENLDLAVGTWERPEVSPLTEPTARMAGEKSRSGFLVDEAKK
GSLAARSQHPGPQGAFLPAACQCHCKHMERWTHGLENDQFEVEKPQGYNPDPYKSKANNV
TMGGELTAVPPELFQVKHELLKEPWKESAEGKQGFPTYLEGSELKAEDVDFESKDDYDRD
GNCQSQDYPGKYSEEESKNSTSGIVGDLRDNLQEARAPTIAQLLQEKTLYSFSEWPKDRV
IINRLDNICHVVLKGKWPSNQQYEPSAALPTPVLTSGAGPRSSLSEPEASEHVFSSGAAL
VAQMQKESFLASVFTKEEQKHRRPYEFEVERDAKTRGLEQFPATHGHPPIVLNGWHGESA
IDLSCPSEGSPGATSPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAATRRRRGRRKHVDGGVDLIFLKEPTLQAGILEVHEDPGPAPLSTSHPSEGPVPA
TSTPEPAPVAGSQPEKAIPSKSLLDWLRQQADCPLEVPGFGANFSDKPKQRRPRCKDTGK
LDVNSLSGEERVPAVPKEPGLRGFLPENKFNHTLPEPVLRDSGPRRRGRRPRSELLKAPA
LVADSPSGMGPLFMNGLIAGMDLVGLQNMRNMPSIPLTGLVGFPASFAAMPTGEEVKSTL
SMLPMVLPGMAAVPQMFGVGGLLNAPMTTTCASAVPAPLSSTTKSGTSAAEKTAEDQPSG
RDVKTDTSAEDKPGPSPFSNQAEPPITTSSPVAFNPFLIPGVSPGLIYPSMFVSPGMGMA
LPAMQQARHSEIVGLESQKRMRKKTKGDNPDPSPEPAPGLEREPGGAQSCPESRAPAPPE
RGHVAQAGEGGPQDSNSVTN
NT seq
8163 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaaatttaaaagttctgaatcac
tccccaatgtctgatgcctccgtcaattttgactacaaatccccctccccgtttgaccac
agcactgatcaggaggacaaaactgaagatgttgcccgtccctgtctgccccagaaggac
ctgcacactgctgaagaggatgctgagacccttttccccaggaaaacgacatcccataac
gggacggaggacagtggaggaggcggcactggcgtgaagaagaaacggaagaaaaaggat
ccaggagagcaagaaggggcagcaaagggaagcaaggacagggagcccaagccaaagagg
aagcgtgaacctagagagccaaaggagcccaggaaggccaaggagcccaggaagcccaag
gagcccaaggagcccaagcagaaggacggggccaagaaggtgcggaagccccgggaggcc
tcgggccccaaggaggccaaagagaagaggagcggccctgactctgcagccaggacgaag
tccaagaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagtcccgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caagtgaagcgcagaaaatacaacgaggacctggacttcaaagtggttgatgatgatggg
gaaaccatcgctgtccttggagccggccggacatctgccctctcagcttctacactggct
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcatct
aagactgtccaggaggttcacccgggagaacccccattcgacttggaactgttctacgtc
aagtacaggaatttctcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gatcctcgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaatccagactacgtggaggttgatcgcatc
ttggaggtggcccacaccaaggatgcagaaaccggagaggaagtgacgcattacctggtg
aagtggtgctcactgccttacgaagaaagtacatgggaactggaggaagatgtggatcct
gcgaaagttaaagaattcgaatctctgcaagttctccctgaagttaagcatgtggagcga
cctgcctcagactcctggcagaaacttgagaagtctcgagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgcattttggcagatgagatgggcctagggaaaaccatccagtccatcacattcctt
tcagaaatattcctcaggggaatccacggccctttcctcatcattgccccgctctccacc
atcactaactgggagcgggagttccggacgtggacagagatgaatgccatcgtgtaccac
ggcagccagatcagcaggcagatgattcagcagtatgagatggtgtaccgagatgcacag
ggaaacccgctgtcaggagtcttcaagttccatgtcgtcattacaacgtttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcattgatgaagcc
cacagattgaagaataggaactgcaaacttctggagggcctgaagctcatggccctggaa
cacaaggtactgctcacagggacgcccttgcagaactcggtggaggagctcttcagtctg
ctcaacttcctggagccgtcacagtttccttcagagactgctttcttggaggagtttgga
gatctgaaaacagaggagcaggtgaagaaactgcagtctatcctcaaaccaatgatgctt
cggcggctgaaagatgacgtggaaaagaaccttgctcccaaacaagagacgatcatcgaa
gtagagctgaccaatatccagaagaagtactaccgcgccatcctggagaagaacttttcc
ttcctgaccaagggggccaatcagcacaacatgcccaatctcatcaacaccatgatggag
ctgaggaagtgctgtaaccacccctacctgatcaacggggcagaggagaaaattctggag
gacttccggaaaacccacagccctgatgcccccgactttcagctgcaggccatgattcag
gcagcagggaagctggtgctgattgataaactgctccctaagctgattgctggcggccac
aaagtactcatcttctcccagatggtgcgctgtctcgacatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacccga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccgatgtcaccggataggccagagtaaa
gccgtgaaggtgtatcgcctcattacacggaactcctacgagcgggaaatgtttgacaag
gccagcctgaagctgggtctggacaaagctgtccttcaggacatcaaccgaaagggcagc
acgaatggagtacagcagctttcaaaaatggaggtagaggacttgctccggaaaggtgct
tatggtgccttaatggatgaggaagacgaaggctccaagttctgtgaagaagacatagac
cagattctgcagaggagaacccacaccatcaccatccagtctgaagggaaaggatccact
tttgccaaggctagctttgtggcttcaggaaacagaacggatatttccttagatgaccca
aacttttggcagaaatgggctaaaatagctgaactggacactgaagcaaagagtgagaag
gaaagcttagtgattgaccgcccacgcgtgaggaagcagaccaaacactacaactctttt
gaggaggatgagctcatggagttttcagagttggacagtgactctgatgagaggcccacg
aggtccaggcgcctcaatgacaaaaccagacgctacctccgagccgagtgcttccgggtg
gagaagaacctgctcatctttggctggggccggtggaaggacattctgacccatggacga
ttcaagtggcatctgaacgagaaggacatggagatgatttgccgggccctgctggtgtac
tgtgtcaagcactacaagggggacgagaagatcaagagtttcatttgggaactgatcacg
cctaccaaagatgggcaggcccagaccctccagaaccactcagggttgtccgctccagtc
cccagagggaggaaggggaagaaaacgaagaaccagctgctgctcccagagttaaagaac
gcagactggctggccacctgcaaccccgaggtggtcttgcacgatgatggctacaagaag
cacctcaaacagcactgcaacaaggtactattgcgagtccggatgctgtactacctaaaa
gctgaaatactgggagaagcagcggataaagcatttgaaggaactccggccagggagctg
gacgtgcctctgcccgacatcgactgcgtggagatcccagtggattggtgggatgccgag
gccgacaagtcacttctgattggcgtgttcaaacatggttacgagaggtacaatgccatg
agagcagacccagcactttgcttcctggagaaggttgggatgccagacgagaagtccctt
tctgcagagcagggtgttacagatggaacctcagacattcccgaaagaggcaacacagat
aaagaagacaatacggaagacaaagtagatggcctccagaaacaaatggagagttccagt
gatggaggtgatggcatttttggtgaaaagaaggatgacagccgggcagcccaggatggc
tccgacccagacaaatcaccctggccagtttcgtctgcactcacagctcgtctccgacgc
ctggtcaccatttaccagcgctgtaaccgcaaggagctctgccgacctgaaatcctggga
ccaggaaaccagggatactgggtccaggaagagatgttccggaggtcctcagagatggat
ctcatcaacaaggaagcccaaaagaggtggactaggagagagcaagccgacttctacaga
acagtgtcttcctttggtgtcgtttatgatcaagaaaagaaaacctttgactggacgcag
tttcgcatcatttcccgtttggacaagaagtcggacgagagcctggagcactatttccat
agcttcgtggccatgtgccgccacgtctgtcgtctgccagcctggaaggatggtggcccc
ccagatcccagcatctgcgttgaacccatcactgaagagcgggccgcgagaaccctgtac
cgcattgaactgttgcggaaggtccgggagcaagtgctgcagtgtcctcagctgcacgag
cgccttcagctctgcaggcccagcctctccctccccatctggtgggagtgtggaaagcac
gatcgggacctgttgatcggcactgccaagcacgggctgaaccgcaccgactactacatc
atgaccgacccccagctgtccttcctggacgcctacagaaactatgcccaacacaaaaga
accgacccccaggctccagggagtctctgttgcctttaccagaccaactccaaactgtat
gagtctcttgcatacactcagatgagcaggacttccgagtcccttgaaaatgaacctgag
aatctagtgaaaatagaaggtagggatgatcatcttggtccacctcggggcagcttatct
gacatgacttgtgaaaactttatttctaaagttcaggatgtcatttccatcacgcatgat
gagagtctgctgcctgagtccttggagagcatgatgtatggtaagaaagcactaagccag
gagccagtctcttttcaggagagcccaggtaccaataccgagtccagacaagatgccgtg
gctctcgcaacaagcagagatggcagcttccagcctggtggccacgaggcagaaatagcc
tcaggcccctcttttatggatacattagaagcaggagtagctcaaatgaacattaaaaat
ggaaaacatttgctggtgtctctttcacaggaaggggaactctgctgcagcgaggcaggg
cagagacctgaaagccttgggcagctggaaaccaaatgcatagcctccccttccttggac
caaggaaatgagagcgggtttgttgacatgtgcaatctgagtgtctatgactccaaaaga
aacctgtcatcagatcagcagttaattgatttattagaatgcaaaagtttagaaagtaaa
ttgattttgggtcagaaccacagtgatgaggaggacgaagaggaggaaaatgaggaggaa
aacctagacctggccgtaggcacgtgggaaaggccagaggtgtcgcctcttaccgagccc
actgctcgtatggcaggggagaagagccgcagcggctttcttgtggacgaagccaagaaa
ggaagcctggcggccagaagccagcatcctggaccgcagggcgcttttcttcccgcagcc
tgtcagtgtcactgcaaacacatggagaggtggacgcacggcctcgagaatgaccagttt
gaagtggagaaaccccagggttacaacccagacccgtacaaaagcaaagccaataatgtc
acaatggggggcgagctcactgctgttccgccagagctgtttcaggtgaagcatgaactt
ttgaaagaaccctggaaagaaagtgcagaagggaaacaaggtttccctacatatctggaa
gggagtgaactcaaggcagaagacgtggattttgagagtaaagatgattatgatagagac
gggaactgccagagtcaagattatccagggaaatactctgaggaggagagcaagaactcg
acctcgggcatcgtaggggacctcagggacaacctgcaggaggcacgggctcccaccatt
gcacagctgctccaggagaaaaccctctattccttctccgagtggccaaaggatcgcgtg
ataattaaccgcctggataacatctgccatgtggtgttaaaggggaagtggccctccaac
cagcagtatgagccctcggccgcgctgcccacccccgtgttaaccagcggcgctggtccc
cgcagcagcctttcagagccagaggcatcagaacatgtcttcagcagtggcgcagcgttg
gtggcccagatgcagaaggagagcttcttggcttcggtattcacaaaggaggaacagaag
cacaggcgtccttatgagttcgaggtggagagggacgcaaagacccggggcctggagcag
ttccccgccacccacgggcacccccctatcgtcctcaacggctggcacggagagtcagcg
atagacctctcctgcccatcggaggggtccccgggggccacatcccctttcccagtgagc
gccagcacccctaagattggggctatcggttcacttcaaggagcccttggcatggacttg
tctgggattctgcaagccggcctgatccatccagtgactggacagatcgtcaacggaagc
ctcaggagagatgacgctgccaccaggaggcggagagggaggcggaagcatgtagacgga
ggcgtggacctcatctttctgaaggagccgacactccaggcggggatcttggaggtccac
gaagacccagggccggcccccctgagcacctcacacccttctgaagggccagtgcctgcc
acttcgaccccggagccggccccggtagccggcagccagcccgagaaagccattcccagc
aagagcctgctggactggctgcggcagcaggcagactgccccctcgaggtccctggcttt
ggcgcgaatttttcagacaaacccaagcagaggaggccacgctgtaaggatactggaaaa
ttagacgtcaactccctgagtggggaagagagggttcctgccgtccccaaggagccaggc
ctgagggggtttctcccggaaaacaagttcaatcacacccttcctgagcctgttctccga
gactcaggcccccgccggaggggcaggcggccccggagcgagctcctaaaggctcccgcc
ctcgtggcggactccccctccgggatggggcctctcttcatgaacggcctgatcgccggg
atggacctggttggacttcagaacatgagaaacatgcccagcatccccctcacggggctg
gtggggttcccggccagctttgcagcaatgcccacgggcgaagaggtcaagagcacgttg
agcatgctgcccatggtgctgccggggatggccgccgtgccccagatgtttggggtcggg
gggctcctcaatgcccccatgaccaccacctgcgcctcggctgtgccagcgcctttgtca
agcacaacgaagagtggcacgtcggcggctgaaaagactgcagaagaccagcccagcggc
cgtgatgtcaaaacggacacgtcagccgaagacaagcccggtcctagtccattttccaat
caggccgaacctccaataactacgagtagtcctgtggcttttaacccgtttcttatccca
ggagtgtcccccggactcatttacccatccatgtttgtctcccccggcatgggcatggct
ctgccggccatgcagcaggccagacactcagaaatagtaggtctggagagccagaagagg
atgaggaagaaaacaaaaggggacaacccggaccccagcccagagcctgcacccgggttg
gagagggagccgggcggtgcccagagctgccccgaatccagggcccccgcgcctccagag
agaggacacgtagcacaggccggcgaagggggcccccaagactctaacagtgtcaccaat
tag
DBGET
integrated database retrieval system
