Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112398868
Help
Entry
112398868 CDS
T08872
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nasi03036
]
112398868 (HFM1)
Enzymes [BR:
nasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112398868 (HFM1)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
112398868 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
MLLE_2
Motif
Other DBs
NCBI-GeneID:
112398868
NCBI-ProteinID:
XP_024599408
UniProt:
A0A341BCJ9
LinkDB
All DBs
Position
Unknown
AA seq
1432 aa
AA seq
DB search
MLKSNDSLFSLDNLFFEKTDEAENHPDNEKSLDWFLPPAPLISEIPETQALEEEMENHNL
LGQRKRSKMLPSNLKITNEDTNYISQTQKFQFAFPSNEYEEDDLNFGGAGNNDLHVAGKL
TYGSSQKWKNHTGTQIALEKNFPDDTKLINFAQDKGESTSAFCKRLFKISDNIHGSAYSN
DRVNLDSHIGSVKTVQMEMSKGKSWKYSNSKQKPQYSDINMFRASDTFSASEIREGIIKG
PSFSVASQPHEFQGATENGFNSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRN
FVICAPTGSGKTVLFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGPIG
LNCKELTGDTVMDDLFEIQQAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEIHVVKD
ENRGPTLEVVVSRMKTVQFLSHAVENTSSIIPMRFVAVSATIPNAEDIAEWLSDGERSAV
CLKMDEGHRPVKLEKVVLGFPCSNNQTEFKFDLTLNYKVASVIQTYSDQKPTLVFCATRK
GVQQAASVLVKDAKFIMTVEQKQRLHKYAYSVRDSKLRDILIHGVAYHHAGMELSDRKVV
EGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRP
QFDTTATAVIMTRLSTKEKYIQMLACSDNVESSLHRHLIEHLNAEIVLHTITDVNIALEW
IRSTLLYIRALKNPSHYGFASGLSKDGIESKLQELCLKNLNDLSSLDLIKMDEDVNFKPT
EAGRLMAWYYITFETVKKFCTISGKETLLDLVTMVASCKEFLDIQLRTNEKKTLNTLNKD
PNRITIRFPMGGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTSKIFRNGSRITRWLSDF
MAIQEKFAVLLNSLILAKCFRCRLWENSLHVSKQLEKIGVTLSNAMVNAGLTTFKKIEET
DARKLELILNRHPPFGTQIKETVMYLPKYELEVEQIARYSDTMAEILVTVILRNFEQLQT
KRTAPDSHYVTLIIGDADNQLVSKHKIMDSVLLKAGNWAKKIDVRRALKSEDLSINLISS
EYVGLDIQQKFTVFYLGPKRFGNQILMQKKPETEMSHFKHSIAVPSKGMTACKKPGNREC
KHHCKNKHTCGHDCCKNGVAQKSEMKESTVSSYLSDLRNRNAVSSLPPVKRLKMQMNKSQ
SVDLKEFGFTPKPSLTSISRSEYLNIPELPIMEQRYQHEIYTKGQQPEPSAYQDKEVLNV
NFELGNEVWDDFDDESLIEVTSFSTDTEKTKTSGFGNPLSSRTRESKLPFEESKSKFQRE
MSNSFVSSHEKPDIYLSNSAMSKFAASSMTKLPQQAGNVHLQEIQQQSLSPEIEKLYFTH
SEKIPSSSNFVKKVDCFIRNSEHKKEIDFSQYYPEDEADEIKSFLGIFDGIF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgactccttgttttccttggataatttgttttttgaaaaaacagat
gaagctgaaaaccatccagacaatgaaaaatctttggattggtttctgccacctgctcca
ttgatttcggaaattccagagactcaagcattagaggaagaaatggaaaatcataatctg
ttaggtcagagaaagaggtcaaaaatgttaccatcaaatttgaagatcactaatgaagac
acaaattatatttcacaaacacaaaaattccaatttgccttcccttctaatgaatatgaa
gaagatgatctaaattttggaggggcaggtaacaatgacttacatgttgctggcaagctg
acatatggttcttctcagaaatggaaaaatcacactggcactcagatagcacttgagaaa
aattttccagatgatacgaagttaattaattttgcacaagataaaggagagagcacgtca
gccttctgcaagagattatttaaaatatctgacaatatacatggaagtgcttattccaat
gacagagtaaacttggactctcatattggctcagtgaaaactgtccaaatggaaatgagc
aaagggaaatcatggaaatatagcaatagtaagcagaaacctcaatattcagacattaat
atgtttagagccagtgatactttttctgcttctgaaatcagagaaggcataatcaaagga
ccatctttttcagttgcctcccagcctcatgaatttcaaggggcaacagaaaatggtttc
aattccttgaaggctgtcacagaaatcccggcaaaatttagaagtattttcaaagaattc
ccatatttcaactatatacagtccaaagcctttgatgatcttctttatacagataggaat
tttgtgatttgtgctccaactggttcggggaaaactgtattgtttgagctagctataaca
agattgttaatggaagtaccattgccatggtcgaacattaaaattgtttacatggcacca
ataaaagccctgtgtagtcagcgttttgatgattggaaagaaaaatttggaccaatagga
ttgaactgtaaagaactcactggagatacagtaatggatgacttatttgagattcagcaa
gcccatattattatgacaactccagaaaaatgggatagcatgactaggaaatggagagac
aactctttggtccaactggttcgattgtttctcattgatgagatacacgttgtaaaagat
gaaaatcgtggaccaactcttgaagttgtagtcagcagaatgaaaactgtgcagttttta
tctcatgctgtagaaaataccagcagtattattccaatgagatttgtagctgtatctgca
acaattccaaatgctgaggatattgcagaatggctttcagatggtgaaagatctgctgta
tgtctgaaaatggatgagggacatagaccagtgaaacttgagaaagtggtccttggattt
ccctgcagtaataaccaaaccgaatttaagtttgatttaaccctcaactacaaagttgcc
agtgttatacaaacgtactctgatcagaaacccacgcttgtgttttgtgcaacaaggaaa
ggtgtgcaacaggctgcttctgttcttgtgaaagatgcgaaatttattatgactgtggaa
cagaaacagaggttacataagtatgcatattccgtaagagattcaaaactgagagatatc
ttaatacatggtgttgcttatcatcatgctggtatggagctgtcagatagaaaagtagtt
gaaggagcttttactgttggagatctaccagttctttttactaccagtaccttagccatg
ggagtaaatttgcctgctcacctagtagttataaaatctacaatgcattatgctggagga
atgtttgaagagtacagtgaaacagacattctacagatgattggtagagctggtcgacct
caatttgacactacagctactgcagttattatgactcggttaagtacaaaagagaagtat
attcagatgctagcttgtagtgacaatgtagaaagcagtttgcacagacatcttattgag
catttaaatgcggagatagtattgcataccatcacagatgtgaatattgctttggaatgg
atacgatcaaccttgctttatatcagagccttgaaaaatccatctcattatggttttgca
tctggattgagcaaagatggaattgaatcaaaattacaagaattatgtttgaagaatctg
aatgatttatcatctctggacctgataaagatggatgaagatgttaatttcaaaccaact
gaggcaggaagattgatggcttggtattatattacatttgagacagtgaagaaattttgt
acaatcagtggaaaagaaactttattggatctggtcacaatggtagccagctgcaaggaa
tttctagatatacagttaagaacaaatgaaaagaaaacactgaatactttgaacaaagat
ccaaatcggataactatcagatttccaatgggaggaagaattaaaacaagagaaatgaaa
gtaaattgtcttattcaggctcagctaggatgcattcccatacaagactttgctttgaca
caagatacttcgaagattttcagaaatggctcacgaattacaagatggttgtcagatttt
atggctattcaagaaaagtttgctgtactgttgaacagtttgattttagcgaagtgtttt
agatgtagactttgggaaaactctctgcatgtatccaaacagctggaaaaaatcggtgta
acattatcaaatgctatggtaaatgcaggtttgactacctttaaaaagatagaagaaaca
gatgcaaggaaacttgaactgattttaaatagacatcccccttttggaactcagataaaa
gaaacagtgatgtatctaccaaaatatgaacttgaagtggaacagattgcaagatatagt
gataccatggcagaaatattagtgactgttatattaagaaattttgaacagctacaaact
aaaagaacagcaccagattcccactacgttaccttaattataggtgatgcagataatcaa
ctggtttctaagcacaaaattatggattctgttttgctaaaagctggaaattgggctaaa
aagattgatgtgaggcgagctcttaaatctgaagatcttagcataaatctaattagttct
gaatatgttggacttgatatacagcagaaatttacagtcttttacttaggacccaagaga
tttggaaatcaaatacttatgcaaaaaaaaccagaaacagagatgtcccattttaaacat
tcaatagcagtgcccagtaaaggaatgactgcctgcaaaaaacctgggaaccgagaatgt
aaacatcactgtaaaaataaacatacatgtggacacgactgctgtaaaaatggagttgca
cagaagtcagaaatgaaagagtcaacagtttcttcatatttatctgatttaagaaacaga
aatgctgtttcatctcttcctccagtgaaacgtctaaagatgcagatgaataaatctcaa
agtgtggaccttaaagagtttggttttactccaaaaccttctcttaccagtatatcaagg
tcagaatatttaaacatacccgaattgcctataatggagcagaggtatcagcatgagatc
tacacaaaaggtcaacaaccagaaccatctgcatatcaagacaaagaagttttgaatgtg
aactttgaattgggaaatgaagtttgggatgattttgatgatgaaagcttaatagaagtt
actagcttttcaactgataccgagaagacaaaaacatcaggatttggaaaccctttgagt
tcaagaaccagggaaagtaagctaccctttgaagaatcaaaaagcaaattccaaagagaa
atgtcaaacagttttgtttcatcacatgagaagccagatatttatttatcaaattctgct
atgtccaagtttgctgcatcctccatgacaaaattacctcaacaagctggaaatgtccat
ttacaagaaatacaacaacaaagtctgtcgccagagattgaaaagctgtactttactcac
tctgaaaaaataccaagctcttcaaattttgttaagaaagtggattgctttattagaaac
agtgaacataaaaaggagattgatttcagtcagtattatcctgaggatgaagctgatgaa
atcaagtcttttctgggaatatttgatggtattttctaa
DBGET
integrated database retrieval system
