Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112398927
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Entry
112398927 CDS
T08872
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112398927 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nasi04131
]
112398927 (TGFBRAP1)
Membrane trafficking [BR:
nasi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112398927 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
112398927
NCBI-ProteinID:
XP_024599533
UniProt:
A0A341BCW8
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MMSTKAFTLVPAVEREQLMGDREWVSLECVECCGRNLYVGTSDCFVYHFLLEEKTVPGGS
ATFTATKQLHRHLGFKKPVNELRAASALHRLLVLCDGSITLVHMLSLEPVPSGARIKGAT
AFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFL
CLALTTQYIILNYSTGVAQDLFPFCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVVGAAVCFPYVIALDSEFITVHSMLDQQQKQTLPFKEGHILQDFEGRLIVA
TSKGVYVLVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEFADLNQLTQGDQEK
VAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYTEADHDSLLDLLVTENFCLLTDSA
AWLEKHKKYFALGLLYHYNHQDAAAVQLWVSIVNGDIHDSTRSDLYEYIVDFLTYSLDPD
LVWQYADWVLQKNPEVGVQVFTKRPVDEQSRFNPDDVISCLKKYPQALVKYLEHLVVDRR
LEKEGYHTHLAILYLDEVLQQRPSASGKDAEVTETQAKLRRLLQQSDLYQVHFLLDRIRG
AGLPMENAILLGKLEQHEGALRILVHELADFPAAEGYCLWRSEGRAPPYRRRLFQLLLAI
YLGPGPSAPELAVAAVDLLNRRATEFDAAQVLQLLPGTWSVQLLCPFLTGAVRDSVHARR
TTQVAMGLAKSENLIYKYDKMKLKGSSVRLSDKKLCQMCRNPFCEPVFVRYPNGGLVHTH
CAASRHTNPSSPSPGART
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaccaaggcgttcaccctggtccccgccgttgagcgggagcagctgatgggc
gacagggaatgggtgtcattggagtgtgtggagtgctgcggccggaacctgtacgtgggc
accagcgactgcttcgtgtaccacttcctgctggaggagaagaccgtgcccggtgggtcg
gccacgttcacggccaccaagcagctgcacagacacctgggtttcaagaagccggtgaat
gagctacgggcggcgtcggccctccaccggctgctggtgctctgtgacggctccatcacc
ctggtccacatgctgagcctggagcccgtgccctcgggtgcccgcatcaagggggccacg
gccttcgccttgaatgagaacccggtgagcggagaccccttctgcgtggaggtctgcatc
atctccgtcaagcgcagaaccatccaggtgttcctggtgtacgaggaccgcgtgcagatc
gtcagggaggtgtccactccggagcagcccctggcagtggcggtggacggccacttcctg
tgcctggccctgaccacgcagtacatcatcctcaactatagcacgggcgtcgcccaggac
ctgtttcctttctgcagcgaggagaagcggcccatcgtcaagaggatagggagacaggag
ttcctcctggcaggccccggcggattgggcatgtttgccacggtggccgggatatctcag
cgcgcgcccgtgcactggtcagagaacgtggttggagcagccgtctgcttcccatacgtc
attgccctcgacagcgagttcatcaccgttcacagcatgctggaccaacagcaaaagcag
accctgccctttaaggaaggtcacatcctccaggattttgaaggaagactgatcgtcgcc
acaagtaaaggagtttacgtcttggttccgttacctctggaaaaacaaatacaggatctt
ctagcaagccggagagtggaggaggctctggttctagcaaaaggcgcccggaggaacatt
ccaaaggaaaaatttcaggtcatgtaccggcggatcctgcagcaggcgggcttcatacag
tttgcgcagcttcagttcctggaggctaaagaactcttcagaagcggccaactcgacgtg
cgggagctgatctccctgtacccgttcctgctgcccacgtcctcctcgttcacccggtcc
caccctcctctgcacgagtttgcagacctcaaccagctgacccagggcgaccaggagaag
gtggccaagtgcaagcgcttcctcatgagctacctgaacgaggtccgcagcacggaggtg
gccaacggctacaaggaggacatcgacacggccctgctcaagctgtacacggaggctgac
cacgacagcctgctggacctcctggtcaccgagaacttctgtctgctcaccgacagcgcc
gcctggctggagaagcacaaaaagtactttgcactggggctgctctatcattacaaccac
caagacgctgctgccgttcagctgtgggtgagcatcgtcaacggggatattcacgactcc
acgcgctcagacctgtacgagtacatcgtggatttcctcacctacagcctcgacccggac
cttgtgtggcagtatgctgactgggtcttgcagaaaaatccggaggtcggagttcaggtt
ttcaccaagagacctgtggacgaacagagtaggtttaacccagatgatgtcatcagttgc
cttaagaaatacccgcaagccctggtcaagtacctagaacatctggtcgtggacaggaga
ctggagaaggaggggtaccacacgcacttagccatcctctacctggacgaggtgctgcaa
cagaggcccagcgccagtggcaaggatgcagaagtgaccgagacgcaggcgaagctacga
cgtctgctccagcaatccgatttgtaccaggtccactttctgctggacaggatccggggc
gccgggctccccatggagaacgccatcctgctcgggaagctggagcagcatgagggggcc
ctgcgcatcctggtccacgagctggccgacttcccggcagccgagggctactgcctgtgg
cgctccgagggccgggccccgccgtaccgccggcggctcttccagctcctgctggccatc
tacctgggccccggcccctctgcgcccgagctggccgtggccgccgtggacctcctgaac
cgccgtgccaccgagttcgacgcggcccaggtcctgcagctgttgccgggcacgtggtcg
gtgcagctgctctgcccgttcctgacgggggccgtgcgggacagcgtccacgcccggagg
accacgcaggtggctatgggcctggccaagtcagaaaacttgatctacaagtacgacaag
atgaagctgaaaggaagctcagttcggctctcggacaaaaagctttgccagatgtgccga
aacccattttgcgagcccgtgtttgttaggtatcccaacggtggtctcgtccacacccac
tgtgcggccagcaggcacacgaaccccagctcccccagccccggggctcggacttga
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