Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112399408
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Entry
112399408 CDS
T08872
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04612
Antigen processing and presentation
nasi05145
Toxoplasmosis
nasi05152
Tuberculosis
nasi05164
Influenza A
nasi05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
112399408 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
112399408 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
112399408 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
112399408 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
112399408 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nasi01001
]
112399408 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nasi04054
]
112399408 (CIITA)
Enzymes [BR:
nasi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112399408 (CIITA)
Protein kinases [BR:
nasi01001
]
Serine/threonine kinases: Other
TAF1 family
112399408 (CIITA)
Pattern recognition receptors [BR:
nasi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112399408 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
112399408
NCBI-ProteinID:
XP_024600360
UniProt:
A0A341BC80
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEDLLSREYHYALLHEPDGEALARKISLT
LMEKGDPDLAPLGWIWSGLQAPAAERDSGYKDPGGSGQHTTMELGPLEGGYLELLNSNAD
PLHLYHLYDRMDLAGEEELELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDSQLEGLSKDIFIEHIGLEEMISESVEVLEEAGQKSQKRPFPEELPVDLKHRKLAE
PLAMPVVTGAFLVGLVSDSSAQPCPSPPALFNKEPASSQTQLKDTVPPSSSLLSCLSLPA
GPIQIIPTLSTLPQGLWQISGAGTGISSILIYQSEMPQARQTPASSSTAVHSLPKSPDRP
GSTSPFAPSAADLPSMPEPALTSRTNLTEDEMSTTQCPAAHEASSKLPKWPESVEQFYCS
LRNKYQAKPAGPEGILVEVDLVRVRLERSGGKSQDRELTTLDWAERQPARGSLGKVLLAS
SNHRRPRETQVIAVLGKAGQGKSHWVQAVSWAWACGQLPQYDFIFCIPCHCLDRPGDTYR
LQDLLFSLGSQPLSVDDEVFSYILRRPDRILLILDAFEELEAQDGFLHSTGGPMSAEARS
LRGLLAGLFQRKLLSGCTLLLTARPRGRLAQSLSKADALFEVAGFSAQQAETYVMRYFEC
SGTTEHQKRALALLQSQPFLLSHSHSPTVCRAVCQLLEALLELGDEAQLPSTLTGLYVGL
LGPGARDSPPGALVGLARLAWELGRGHQSSLREGQFPSTEVRVWAVAQGLVQPTPGAPET
KLAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQ
PRACCLGALAGLAGSTSADRKQKVLTRYLKRLQPGTLKAGRLLELLHCAHEALDAGLWQH
VLQGLPAHLSFLGTRLTPPDTHVLGSALEAAGRDFSLDLRSTGVDPSGLGSLVGLSCVTH
FRAALSDTVELWESLQQHGEAKLLRAVKEKFTIEPFKAESMKDVEDLGNLVQIQRTRSSS
EDTPGELPAIRDLKKLEFALGPILGPQAFPKLVKILEAFSSLQHLDLDSLSENKIGDEGV
AQLSATFPQLKALETLNLSQNNITDLGACKLAEALPLLAASLLRLSLYNNCICDVGAESL
AHVLPDMVSLRVLDVQYNKFTAAGAQQLTASLRKCPHVEKLAMWTPTIPFGVQEHLQQLD
SRIILR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagaccatcctgagtcaggtccggatgctgctctccagccatcggccg
agccaagtgcaggcgcttctggacaacctgctggcagaggatcttctctccagggagtac
cactacgccctgctccatgagcctgatggtgaggctctggccaggaagatctccttgacc
ctgatggagaaaggagacccagacttggcccccttggggtggatctggagtgggctgcag
gccccggcagccgagagggactccggctacaaggaccctgggggcagtggacagcacaca
accatggagttggggcctctagaaggtgggtacctggagcttctcaacagcaatgctgac
cctttgcatctctaccacctctatgaccggatggacctggctggagaagaagagctagag
ctctgctcagaacctgatacggacaccatcaactgcgaacagttcagcaggctgttgtgt
gatatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccag
tatgtcttccaggattcccagctggagggcctgagcaaagacattttcatcgagcacata
ggactggaagaaatgatcagcgagagtgtggaggtgctggaggaagcaggacagaaaagt
cagaaaagacccttcccagaggagctgcctgtggatctgaagcacaggaagctagctgag
cccctagccatgcccgtggtgactggtgctttcctggtggggctagtgagtgactcctca
gctcagccctgcccgtcaccacctgctctgttcaacaaggagccagcatccagccagacc
cagctgaaggacaccgtgcccccttccagttccttgttgagctgcctgagtctccctgct
ggacccatccagatcatccccactctctccactctgccccaggggctctggcaaatctca
ggggctgggacagggatctccagtatactcatctaccaaagtgagatgccccaggcccgc
caaacacccgcctccagcagcacagctgtccacagcctcccgaagtccccagaccggccc
ggctccaccagcccctttgccccatcggcagctgacctccccagcatgcctgaaccagcc
ctgacctcccgtacaaacctaacagaggatgagatgtccaccacccaatgcccagcagct
cacgaggcatccagcaagcttcccaagtggcctgagagtgtggaacaattctactgctcg
ctacggaacaagtaccaggctaagcctgcaggcccggaaggcatcctggtggaggtggac
ctggtgagggtaaggctggagaggagcggcggcaaaagccaggacagagagctgaccacc
ctggactgggcagagcggcagccggcccgaggaagtctgggcaaggtgctgctggcctct
agcaaccaccggcggccacgtgagacgcaggtgatcgccgtgctgggcaaagcaggacag
gggaagagtcactgggtccaggccgtgagctgggcctgggcctgcggccagctgccacag
tacgactttatcttctgcatcccctgccactgtttggaccgtccgggggacacctaccgc
ctgcaggatctgctcttctccctgggttcacagccactgtcagtggacgacgaggtcttc
agttacatcttgaggaggcccgaccgcattctgctcatcctggatgccttcgaggagctc
gaagcccaagacggcttcctgcacagcacgggcggacccatgtcagcagaagcccgctcc
ctccgggggctgctggcaggcctcttccagcgcaagctgctgagcggctgcaccctgctg
cttacagcccggccccggggccgcctggcccagagcctgagcaaggccgacgctctgttt
gaagtggccggcttctccgcccagcaggccgagacctatgtgatgcgctactttgagtgt
tcggggaccaccgagcaccaaaagagagccctggcgctcctccagtcccagccatttctc
ctgagtcacagccatagccccactgtgtgccgggctgtgtgccagctcttggaggccctc
ctggagctaggtgatgaggcccagctgccttccacgctcacgggcctctatgttggctta
ctaggcccaggagcccgtgacagccccccaggggccctggtgggactggccaggctggcc
tgggagctgggccgcggtcaccagagcagcctgcgggagggccagttcccatcgaccgag
gtgagggtctgggctgtggcccaaggcttggtgcagcccaccccgggggccccggagacc
aagctggccttctccagcttcctcctgcaatgcttcctgggggccgtgtggctggctctg
agcagcgaaatcaaggacaaggagctgccgcagtatttggcattgaccccgaggaagaag
aggccctatgacaactggctggagggcgtgccgcgctttctggtcgggctggtcttccag
cctcgtgcctgctgcctgggagccctggcagggctggcgggctccacctcagcggacagg
aagcagaaggtgctcaccaggtacctgaagcggctgcagcctgggacgctgaaggcgggg
cggctgctggagctgctgcactgcgcccacgaggcgctggatgctgggctttggcagcat
gtgctgcaggggctcccggcccacctctcgttcctgggcacccggctcacacctcccgac
acccacgtgctgggcagcgccttggaggcggcgggccgagacttctccctggacctccgc
agcactggcgttgacccctctggactggggagcctcgtgggactcagctgtgtcacccat
ttcagggctgccttgagtgacacagtggagctgtgggagtccctacagcagcatggggag
gccaagttactccgagcagtgaaggagaagttcaccattgagcctttcaaggctgaatcc
atgaaggatgtggaagacctgggcaacctcgtgcagatccagaggacaagaagttcctct
gaagacacgcctggggaactccctgccatccgagacttaaagaagctggagtttgcgctg
ggccccatcttgggccctcaggcttttcccaaactggtgaagatccttgaggccttttct
tcccttcagcatctggacctggactcgctgagtgagaacaagatcggggatgagggtgtt
gcccagctctcggccaccttccctcagctgaaggccctggagacgctcaatttgtcccag
aacaatatcactgacttgggtgcctgcaagctggcggaggccctgcccttgctggctgcg
tccctcctcaggctgagcttgtacaataactgcatctgcgatgtgggagctgagagcctg
gcacacgtgcttccagacatggtgtccctccgggtgctggatgtccagtacaacaagttc
acagctgccggggcccagcagctcactgccagcctgagaaagtgccctcacgtggagaag
ctggcgatgtggacacccaccatcccttttggcgtccaggaacacctgcagcagctggac
tcaaggatcatcctgagatga
DBGET
integrated database retrieval system
