Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112399425
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Entry
112399425 CDS
T08872
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112399425 (TNRC6A)
03036 Chromosome and associated proteins [BR:
nasi03036
]
112399425 (TNRC6A)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112399425 (TNRC6A)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112399425 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112399425
NCBI-ProteinID:
XP_024600389
UniProt:
A0A341BDU0
LinkDB
All DBs
Position
Unknown
AA seq
1868 aa
AA seq
DB search
MEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKR
ATANNQQPPPQPPPQPQQPPQPQPPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAAN
LGSAVKVLSSQSESSALTNQQPQNNGEVQISKTQSDINHNTSGSHYENSQRGPVSSTSDS
STNCKNAVVNDSPEKEAWPSVPGSDLELASECVGADSASSSESERNITIMASGSTGGEND
GLRNSTGLGSQNKFVVGSSSNNVGHGSSTGPWGFSHGAIISTCQVSVDAPEGKSESSNSR
MNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLENNGLALKGPVGSGSSGINIQCSTLGQM
PNNQSINSKVGGSSTHGTWGSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFVT
SSLPNSGSVQNNELPSNTGAWRVSTMNHPQIQAPSVVNGTSLSHLSNGESKSGGSYGTTW
GAYGSNYSGDKCSSPNGQANGDTVNATLMQPGVNGPMGTNFQVNTNKGGGVWESGAVNSQ
SASWGNGANSGGSRRGWGTPAQNTGTNIPSVEWSKLPSNQHSSDSANGNGKKFTNGWKST
EEEDQGSATSQTNEQNSVWAKTGGTVESEGSTESTGRLEEKVTGENQSRDRRKIDQHTLL
QSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSG
ACTDKTSPSSNDTSSVSGWGDPKPTLRWGDSKGSNCQGGWEDDSAATGMAKSNQWGNCKE
EKSAWNDSQKNKQGWGDGQKSNQGWSVSASDNWGETSRSNHWGEANKKSSSGGSDSDRSV
SGWNELGKTSSFTWGNNINPNNSSGWDESSKPNPSQGWGDPPKSNQSLGWGDSSKPVSSP
DWNKQQDVGSWGIPSATGKPPGTGWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGT
SAWGDPSKYNYKNVNMWNKNVPNGSSRSDQQAQVHQLLPSASAISNKEASSGSGWGEPWG
ETSTPATTVDNGTSAWGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQALSKSGPKSMQDG
WCGDDMPLPGNRPTGWEEEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRR
ERGMMKGGNKQEEAWINPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHS
LNIGDYNRTVGKGPGSRPQISKESSMERSPYFDKNGNPSMFGVGNTAAQPRGMQQPPAQP
LSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQIS
QLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQMMQPSRQLDPNLLVKQQTPPSQ
QQSLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSR
LRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYDFMNSSTSPASPPGSVGDGW
PRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRD
RNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLA
HELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRVGGGWGNSDARYTPGSSWGES
SSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQK
SLHMCVLGNTTILAELASEEEISRFFAQSQSLTPSPSWQSLGSSQSRLGSLDCSHSFSSR
TDLNHWNGAGLSGTNCGDLHGTSLWGTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDH
LGGGGESM
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaagacgacaagaaaaagaaggaagctgctcaaaagaag
gccactgaacaaaaaatcaaagtgccagaacagataaagcccagtgtaagccagcctcag
cctgccaactctaataacggcacttccacagcaaccagcactaataataatgccaagcga
gccacagccaacaatcagcagccgccgccgcagccgccgccacagccccagcagccgccg
cagccgcagccaccacaggccttgcctcggtatccgcgcgaagttccacctcgatttcgc
caccaggaacataagcagcttctaaagaggggtcagcattttcctgtcatagcagcaaac
ctgggatctgctgttaaagtgttaagcagccagtcagagagcagtgctttaacaaatcaa
cagccacaaaataacggagaggtgcagatcagcaaaacccagtcagatataaaccacaat
acttcaggatcccattatgaaaattcgcagcggggacctgtgtcttctacaagtgactct
agcacaaactgtaagaatgctgttgtaaacgactcgcctgaaaaagaagcatggccctca
gtccctggcagtgatctagagttggcttcagaatgtgtgggtgctgattctgcctccagt
tctgaatcagagagaaacatcactatcatggcttcagggagcacaggtggtgaaaatgat
ggccttcggaatagcactggacttggatcccaaaacaagtttgtggttggtagcagcagc
aataatgtgggccatggaagtagtactgggccatggggtttttcccatggagccataata
agcacatgtcaggtctctgtggatgctcctgaaggcaaatcagaaagtagcaacagtaga
atgaatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcactttg
aattcagctagcaaccatggtgcctggccagtgttagagaacaacggacttgccctaaaa
gggcctgtagggagtggtagttctggcatcaatattcagtgcagtaccttaggccagatg
cctaacaatcagagtattaactctaaagtgggtggttcttctacccatggtacctgggga
agccttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagtggt
caacctcaaaatattaccactgaaatgactggaccaaataacactactaactttgtgacc
tctagtttaccaaactccggttcagtacagaataatgaactgcctagtaatacaggggcc
tggcgtgtgagcacaatgaaccatcctcagatacaggctccgtcggttgtaaatggcact
tccctttctcaccttagcaatggagagtcaaaaagtggaggctcttatggtactacatgg
ggtgcctatggttctaattactctggagacaaatgttcaagccctaatggccaagctaat
ggtgacactgtgaatgcaactctaatgcagcctggcgtaaatgggcctatgggcactaac
tttcaagttaacacaaataaaggaggaggtgtgtgggagtctggggcagtgaattcccag
agtgcatcatggggaaatggtgcaaattctggaggaagtcgaagaggatggggaactcct
gcacaaaacactggcactaatatacccagcgtggaatggagcaaactgcctagcaatcag
cattccagtgacagtgcaaatggcaatggtaagaagtttacaaacggatggaaatctact
gaggaagaggatcagggttctgccacatctcagacaaatgagcaaaacagtgtgtgggcc
aaaacgggaggtacagtggagagtgaaggtagtacagaaagcactggacgccttgaggaa
aaagtaactggggaaaatcagagtagagatagaagaaaaattgatcagcacacattactc
caaagcattgtaaacagaactgacttagatccacgtgtcctatccaactctggttgggga
cagactcctattaagcagaatactgcctgggataccgaaacatcacctagaggggaaaga
aagactgacaatgggacagaggcctggggaagctctgcaacacagacttttaactcaggg
gcatgtacagataagactagccctagtagtaatgatacctcatctgtatcggggtgggga
gatcccaaacctactctgaggtggggagattccaaaggctcaaactgccaggggggatgg
gaagatgattctgctgctacaggaatggccaagagcaatcagtgggggaattgcaaagaa
gagaagtctgcatggaatgattcgcaaaagaacaaacagggatggggtgatggacaaaaa
tcaaaccaaggttggtccgtttctgccagtgataactggggagaaacttcaaggagtaac
cattggggtgaggctaataagaaatctagctcaggaggtagtgacagtgataggtccgtt
tctggttggaacgaacttggtaaaactagttcttttacttggggaaataacataaatcca
aataattcatcaggatgggatgaatcttctaaaccgaatccttcccagggatggggagat
cctccaaagtctaatcagtctctaggttggggagattcgtcaaagccagtcagttctcca
gactggaacaagcaacaagatgtcggatcttggggaatcccatcagctacaggcaaacct
cctggtacaggctggctgggaggacctataccagccccaacaaaagaagaagagcctaca
ggctgggaggaaccatccccagaatccatacgtcgcaaaatggagatcgatgatggaact
tcagcttggggagatccaagcaaatacaactacaaaaatgtgaacatgtggaacaaaaat
gtcccaaatggcagcagccgttcagaccagcaagcacaggtacatcaattgctaccatct
gcaagtgccatctcaaacaaggaggcaagcagtggctctggctggggtgagccctggggt
gagacttctactccagccacaactgtggataatggtacttcagcatggggtaaacccata
gacagtggtcccagctggggcgaacccattgctgcggcatccagcacatccacgtggggc
tccagctctgttggtccacaagcattaagcaaatctgggccaaaatctatgcaagatggc
tggtgtggtgatgatatgccattgcctggaaatcgccccactggctgggaagaggaagag
gatgtagagattggaatgtggaatagtaattcatctcaagagcttaattcatctttaaat
tggccaccatatacaaagaaaatgtcatcgaagggtctgagtggcaaaaaaaggagaagg
gaaaggggaatgatgaaaggtggaaacaaacaagaagaagcatggataaatccatttgtt
aaacagttttcaaatatcagtttttcgagagactcaccagaagaaaatgtacagagcaat
aagatggacctttctggaggaatgttacaagacaaacgaatggagatagataaacatagc
ctaaatattggtgattacaatcgaacggtcgggaaaggccctggttctcggcctcagatt
tccaaagagtcttccatggagcgcagtccttattttgataagaatggcaatcccagtatg
tttggtgttggaaacacagcagcacaaccccggggcatgcagcagcctccagcacaacct
ctcagttcatctcagcctaatctccgtgctcaagtgcctcctccattactctcccctcag
gttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccgctctttggc
cctcagcaggtagccatgctgaaccagctatcccaactaaaccagctttctcagatctcc
cagttacagcgattgttagcgcagcagcaaagggcgcagagtcagagaagcgtgccttct
gggaaccggcagcagcaagaccagcagggtcgacctctgagtgtgcagcagcagatgatg
cagccatcgcgtcaacttgacccaaacctgctggtgaagcaacagactccgccatctcag
cagcagtcactccatcagccagccatgaagtctttccttgaaaatgtcatgccccacact
acacctgagctgcagaaagggccatcaccaataaatgctttcagcaacttccccataggc
ttgaactcaaacttgaatgtaaatatggatatgaacagtattaaagagccacagtcaaga
ctaaggaagtggactacagtggacagcatttctgtgaacacatctttggatcaaaactcc
agcaaacatggtgctatttcaagtggtttcaggctggaagagtctccatttgttccctat
gactttatgaacagcagtacttcaccagccagtcctccgggttcagtaggagatggctgg
ccacgtgccaaatcgcctaacggctctagcagtgttaattggccaccagaatttcgccct
ggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttatgtcactcct
ggcagtgtcataaacaatctttcaattaatactgtgcgggaagtcgaccacctcagggac
aggaacagtgggtcatcctcatccttgaacaccacgctgccttcaactagtgcctggtca
tccattcgtgcctccaactacaacgttcccctcagcagtacagcacaaagcacttcagcc
agaaatagtgattccaaattgacatggtctcctggttcagttacaaacacctctctggct
catgagctgtggaaggtccctttgccacctaaaaacatcactgctccgtcccgcccacct
ccgggactgactggtcagaagccacccttgtctacgtgggataattctccccttcgtgta
ggtggaggatggggaaattctgacgccaggtataccccaggttccagctggggtgagagc
agctcagggagaataacaaattggcttgttctgaaaaaccttacacctcagattgacggc
tcaactctgcgcactctgtgcatgcagcatggcccactgatcacattccacctgaacctc
ccgcatggaaatgctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaag
tctctgcacatgtgtgtactggggaacactactattcttgctgagcttgccagtgaagag
gagatcagtcgtttctttgcacaaagtcagtctctgaccccttctcccagctggcagtct
ctcgggtccagccagagccggctgggctccctcgactgttcccactcattctccagccgg
accgatctcaatcactggaatggtgctgggctgtcgggaactaactgtggagaccttcat
ggcacttccctctgggggaccccacattattccacaagcttgtggggtcctccaagcagc
agcgacccccggggaattagcagcccgtcccccattaacgcttttctttctgttgaccac
ctgggtgggggtggagagtccatgtaa
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integrated database retrieval system
