Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112399505
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Entry
112399505 CDS
T08872
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112399505 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nasi04990
]
112399505 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
nasi04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
112399505 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112399505
NCBI-ProteinID:
XP_024600476
UniProt:
A0A341BC44
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQQQPLQVAKIRSQSKASGSGLCEGDEVVSINGSP
CADLTHPEVVKLMESITDSLQMLVKRPSSGISETLNSETENKNHEHLIHEGYMESTTLQI
RPATKSQYREFYIAQVKSGAPLAEDQASGAGFSGSIKEETGLAPHTYDSKSGRLPEEVIL
REKAEAGRPGTVVELQLSLSQERHKRTSAPVVALLGTEKSKPPDQDPNLQHDGIVHINSV
PTNEKGEPCLRSSKIIQISGGQELRVIQGSEAGDTGLPRVEVIFDCSDRQKTEGSRLQAG
KGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSERDHSRPHKHRARHARLRRSESL
SEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELDREAEEE
EEEGDKEDTCEVAFLGASESEVEEELLSDTDDNTQVVNFDWDSGLVDIEKKLNRGDKMEM
LPDTTGKGAIMFAKRRERMDQITAQKEEERMSGMPSREPDAAQMDGLRTMISYQRKEEES
VRVQRSASKSYIEVSHGLGHVPQQNGFTGLSETAEAQRMTPMNRTAKPFPGSVNQPATPF
SPTRNMTSPIADFPAPPPYSAVTPPPETFSRAVSSPTAGPAQPPPWPQPGPWSQPAFYDS
SEQIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKKGT
GAGGDSGPEEDYLSLGAEACNFMQSPTAKQKTPPPVAPKPSVKSSSSQPVTPVSPVWSPG
VAPAQPPAFPTSNPSHGTVVSSIKIAQPSYPTARPASALSLAGPFKGPQASVASLNYTPK
PSAPTPTVNTAHTGAMGPSNELPGMSGKGAQLFAKRQSRMKKYVVDSDTVQAHAARAQSP
TPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPLAAVKSQPSAPQASKTSKKKGKKPLNALD
VMKHQPYQLNASLFTFQPPDAKDGLPAKSSVKVSSLPAMKQAIPPRPVNAGSPTNVQASS
VYSVPAYSSQLSFFAEATSPVSASPVPVAIPTSPKQESASTSYFVAPRPKFSAKKSGVTV
QSGRSLSLPGRPVPPTISTTSPWVYQPAYSYSSKPTDGLEEANKRLTPGEAAAKPSFGLL
DDAFRPRNIQESIMANVVSAARRKVLPGLSEDWNERPSYVPQTQKVNMGSFGRQEYNVAF
LPNNSMPTNSQHDSQVPYAYYRQPSRNDSEIMSMETRSDYCVSVTNCNYNPHPRGWRRQT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggggattttatctgcatttccatgaccggaggggcgccctgggggttcaga
ttgcaaggtggcaaggagcagcagcagcccttacaagttgctaagatccgaagccagagc
aaagcctccgggtctgggctctgtgagggggatgaagtggtttctatcaatggcagccct
tgtgcagacctcacccacccagaggtcgtcaagctcatggagagcataacagactctctc
caaatgctcgtcaaaagaccatccagtggaataagtgagactttgaactctgaaacagaa
aacaaaaaccacgagcatctcatccatgaagggtacatggaaagtaccaccctacagatt
cgaccagccacaaagagccagtacagggagttctacatcgcccaggtcaagagtggagct
cccctagctgaggaccaagcaagtggtgctggtttttctgggagcataaaagaagaaaca
ggcctggctcctcacacgtatgactctaaaagtgggcgcttaccagaggaggttatctta
agggagaaggcagaagcggggcggccaggcactgtggttgagctacaactgtccctttca
caagagagacacaagcgcactagtgcccctgtagtggctctcctgggaactgaaaaatct
aagcctcctgaccaagatcctaatttacagcatgacgggatcgtccacataaattctgtc
cccactaatgagaaaggggagccttgtctgaggtccagcaagataatccagatctccggt
ggccaagagttgagagtgatccagggaagtgaagcaggagacaccgggctgccccgagtg
gaagtgatcttcgactgctctgataggcagaagacggaagggagcaggcttcaggcagga
aaggggtgtgtggattctccagtggaaggagggcagtcagaagcacctccttctctggta
tcctttgcagtctcatcagaaggcacagagcagggagaagatccacgctcagaaagggat
cacagcagacctcacaagcacagagcacgccacgcacggctcaggaggagtgaaagccta
tcagaaaagcaggtgaaagaagcaaaatctaaatgcaaaagcattgccctccttctgaca
gatgcccccaaccccaactccaagggggtgttgatgtttaagaagcgccgtcggagggcc
aggaaatacaccctagtcagttacgggactggtgaacttgatcgagaggcagaggaggag
gaggaagaaggcgacaaagaggatacatgtgaagtagcatttctgggtgcaagcgaatcc
gaggtggaggaagagttgttgtctgacactgacgacaacacacaagttgtgaactttgac
tgggattctggactagtggacattgaaaagaaactgaacagaggggacaagatggagatg
ttgccagacaccacaggcaagggggccatcatgtttgctaagaggagggagaggatggat
cagatcacagcccaaaaagaggaggagaggatgagtggaatgccaagcagagaaccagat
gctgcccagatggatggcctgagaaccatgatatcttaccaaaggaaggaagaagaatcg
gtgagagtgcagaggtctgcaagcaaaagctacatcgaggtgagccatggccttggccat
gtgccccaacagaatggcttcactgggttgtccgagacagcagaggctcagaggatgacc
cctatgaatagaacggccaaacccttcccggggtccgtgaaccagccagcaacccccttc
tctccaacgcgaaacatgaccagtcccattgcagactttcctgcgcctccaccttattct
gcagtcacacccccacctgaaaccttctccagagcagtgtcaagtccgacagctggccca
gcacagccccctccgtggccccagcctggcccatggtcccagccagccttttacgattca
tctgaacaaatagcttcccgggatgaaaggatcgcggtgccagcaaaaagaacaggaata
ttgcaggaggccaaaaggagaagcacgacaaaacccatgttcacttttaaagagcccaaa
gtaagcccaaatcctgaactcttgtcacttcttcaaaattcggaaggcaaaaagggcact
ggggcaggaggagattccggaccagaagaagactacctcagtttaggagcagaggcttgt
aatttcatgcaaagccccactgcaaaacaaaagaccccacctcctgtcgctccaaagcct
tctgtcaagtcctcatcctcccaaccagtaactccagtttctccagtctggtcgccagga
gtggctccagcccaacctcctgccttccccacatccaacccatcacatggcaccgttgtt
tcctccatcaaaatagcgcagccttcttaccctactgcccggcctgctagtgctctgagc
ctggctggtcccttcaaaggaccacaagcatcggtagccagtctgaactacactcccaaa
ccatcagctcccacaccaacggtaaacactgctcatactggcgcaatgggaccatccaat
gagcttccaggaatgagtgggaaaggagcccagctctttgctaaaaggcagtcgaggatg
aaaaagtacgtggtagattcagacaccgtgcaggcccatgctgcccgtgctcagtctccc
actccatctctcccggccggttggaagtactcctccaatgtccgagcacctcctcctgtg
gcctacaatcccatccactccccctcctacccactggctgctgtcaagtcccagccatca
gccccacaggcctccaaaacaagcaagaaaaagggcaagaaaccccttaatgctttggat
gtcatgaagcaccaaccttatcagctaaatgcatccttgtttactttccaacctccagat
gcaaaggatggcctccctgcaaagtcatcagtcaaggtcagttcactgccagccatgaag
caagctattcctcctcggccagtgaatgctggctcgcccactaatgtgcaggcctcgtct
gtgtactcagtgccagcctatagctctcagctttccttctttgccgaggccacctcacca
gtaagcgcctccccagtgcccgtggccattcccacctctccaaagcaagaatcagcctcg
acatcttactttgtggcaccaaggccgaagttctcagcaaagaaaagtggtgtcacagtt
cagagtggacgctctctttctcttcctggaagaccagtcccacccaccatctctacaaca
tctccttgggtataccagcctgcttatagctactctagcaaaccaactgatgggctagag
gaagcaaacaagagactaactcctggggaagcagcagccaagccttcttttggtttactg
gatgatgccttcagacccagaaacattcaggaatccattatggcaaatgtggtctcagca
gctcggaggaaggtgcttccagggctgtctgaggattggaatgaaagaccgtcctatgtt
cctcaaacccagaaggtcaatatgggctcatttggaaggcaagagtataatgttgcattc
ctacccaataatagtatgcccaccaactcccaacatgattcacaggtaccatatgcatat
tataggcagccttccagaaatgattctgaaataatgtctatggagaccaggtctgattac
tgtgtttcagtaaccaattgcaactataacccacaccctaggggatggagacgccaaaca
tga
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