Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112399705
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Entry
112399705 CDS
T08872
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nasi03009
]
112399705 (DCAF13)
04121 Ubiquitin system [BR:
nasi04121
]
112399705 (DCAF13)
Ribosome biogenesis [BR:
nasi03009
]
Eukaryotic type
90S particles
Other 90S particles
112399705 (DCAF13)
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112399705 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Sof1
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
ANAPC4_WD40
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
112399705
NCBI-ProteinID:
XP_024600786
UniProt:
A0A341BD35
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDSYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVSCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRMIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPSYGEEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDI
WDEQRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMIHMDHVSAVLDVDYSPTGKDFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAATDYNQRLKEKFQHHPHIKRISRHRHLPKSIYSQIQEQRIMKEARRRKELN
RIKHSKPGSVQRVSEKKKRVVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagatgttgagccggaacccggacagctatgtccgcgaaaccaaactggac
ttacagagagttccaagaaactatgatcctaccttacatccttttgaggtcccacgagaa
tatgtaagagctttaaatgccaccaaactggaacgggtttttgcgaaaccgttccttgct
tccctggatggtcaccgagacggagtcagttgcttggctaaacatccgaagagtctggct
actgtcctttctggggcatgtgatggagaggttagaatttggaacttaactaaacgaaaa
tgtattcgtatgatacaagcacatgaaggttttgtacgaggaatatgtactcgcttttgt
gggacttccttttttactgttggtgatgacaaaactgtgaagcagtggaaaatggatgga
ccaagctatggagaagaggaggaaccattgcatacaatattaggaaagacagtgtataca
ggaattgatcatcactggaaagaagctgtttttgccacatgtggacagcaagtagacatt
tgggatgaacaaagaaccagtcctatatgttcaatgacttggggatttgacagtataagc
agtgttaaatttaacccaattgagacatttctcttgggaagttgtgcttctgacaggaat
atagtactatatgatatgaggcaagctactcctctgaaaaaggtcatcttagatatgaga
acaaatacaatttgctggaaccctatggaagctttcatttttactgcagcaaacgaagat
tacaacttatatacttttgatatgcgtgcactggacactcctgtaatgatacatatggat
catgtgtctgcggtgcttgatgtggattactctcctactgggaaagactttgtgtctgct
agttttgataaatctattcgaatctttcctgtggacaaaagtagaagcagggaagtctat
cacacaaagagaatgcaacatgttatctgtgtaaaatggacttctgacagcaagtacatt
atgtgtggatctgatgaaatgaacattcgtctatggaaagctaatgcttctgaaaagttg
ggtgtgcttacatcacgagaaaaagcagccacagattataaccagagattaaaggagaaa
tttcaacatcatcctcacataaaacgtatttctcgtcaccgacatctaccaaaatctatc
tacagtcagattcaggagcagcgcatcatgaaagaagctcgtcgacgaaaggaactgaat
cgtatcaaacatagcaagcctggatctgtgcagagggtgtcagagaagaagaaacgcgta
gtggcagttgtgaaataa
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