Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112399712
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Entry
112399712 CDS
T08872
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nasi04515
]
112399712 (PCDH18)
Cell adhesion molecules [BR:
nasi04515
]
Cadherins
Protocadherins
112399712 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
BBS1
TMEM154
Syndecan
MPS-4
ATG31
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
112399712
NCBI-ProteinID:
XP_024600794
UniProt:
A0A341BEY4
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MYQMNAKMHFRFVFALLVVSFNSDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PSTVRFRAMQRGNSPLLVVNEDSGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRPLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVQTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPIGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCRLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDVNDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNIPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAMDRDSGVNAELSCSIVAGNEENIFVVDPRSCDIHTNVSMESVPYTEWELSVVIQD
KGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRPSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHPSLEDDTQPVDSGEKKKSFSTFGKDSPNDEDSGDTSTSSLLSEMSNVFQRLLPPSL
DTYSECSEMDRSNSLERRKGPLSAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLSHLGDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaatgaatgctaaaatgcactttagatttgtttttgcactcctggtggtatct
ttcaactccgatgtactgggcaagaatttgaaatacaggatttacgaggagcagagggtt
ggatcggtaattgcaagactatcagaggatgtggctgatgttttagttaagctacctaat
ccttctaccgttcgcttccgagccatgcaaaggggaaattctcctctactcgtggtcaac
gaggatagcggggaaatcagcataggggcaaaaattgaccgcgaacaactatgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccactgagcatctgcagctt
ttccatattgaagttgaagtgctggatattaatgacaattctccccagttttcaagacct
ctcataccgattgagatatcagagagtgcagcagttgggactcgtatccctttggacagt
gcatttgatccggatgttggggaaaactccctccacacgtactctctctctgccaatgat
ttctttaatatcgaggttcagactaggacggatggagcgaagtatgcagaactcatagtg
gttagagagctggatcgggagctgaagtcgagctatgagcttcagctcaccgcctcggac
atgggggtgcctcagaggtctggctcatccatactaaaaatcagcatttcagactctaat
gacaacagccccgcttttgagcagcagtcttatataatacagctcttagaaaactccccc
attggcactttgctgctagatctgaatgccactgatccagatgagggcgctaatgggaaa
attgtctattccttcagcagtcatgtgtctcccaaaattatagagacttttaagattgat
tcagaaagaggacatttgactcttttcaagccagtggattatgaaatcaccaaatcctat
gagatcgatgttcaggctcaggatttgggtccaaattcaatcccagctcattgcaaaatt
ataattaaggttgtggatgttaatgacaataaacctgaaattaacataaacctcatgtcc
cctggaaaagaagaaatatcttatatttttgaaggggatcctattgacacatttgttgcc
ttggtcagggttcaggacaaggattctgggctgaatggagaaatagtttgtaggcttcat
ggacatggtcactttaaacttcagaagacttatgaaaacaattatttaatcttgacaaat
gccacgctggatagagaaaagaggtctgaatacagtttgactgtaatcgctgaggacaag
gggacacccagtctctcaacagtaaaacattttactgttcaaatcaatgatgtaaatgac
aatccaccccacttccagagaagtcgatacgaatttgcaatctcagagaataactcgcca
ggggcatatatcaccactgttacagccacagatcctgatcttggagaaaatgggcaagtt
acatataccattttggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatctaatggcgccatctatgccctcagaatctttgatcacgaggaagtgagtcag
atcacttttgtggtcgaagcaagagatggtggaagtccaaagcaactcgtaagcaatacc
acagttgtgctcaccatcattgacgaaaatgacaacatccctgtggttataggaccggca
ctgcgcaataataccgcagaaatctccatccccaaaggggctgaaagcggctttcatgtc
acaagaataagggcaatggacagagactctggtgtgaatgctgaactcagctgctccata
gtagcaggtaatgaggagaatatctttgtagttgatccacgatcatgtgacatccatacc
aacgtcagcatggaatctgttccctacacagaatgggagctctcagttgtcatccaggac
aaaggcaatcctcagctgcataccaaagtccttctgaagtgtatgatctttgaatatgca
gagtcagtgacaagtacagcaatgacctcagtaagccaggcgtccttggatgtctccatg
attataattatttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttt
gcaactaggtgtaaccgagaaaagaaagacactagatcctacaactgcagggtagcggaa
tcaacttaccagcatcacccaaaaagaccctccaggcagatccacaaaggggacatcaca
ttggtgcctaccgtcaacggcactctgcccatcagatctcatcacagaccgtctccttct
tcatctcctaccttagaaagagggcaaatgggcagccggcagagtcacaacagtcaccag
tccctcaacagtttggtgacaatctcatcgaaccacgtgccagagaatttctcattagaa
ctcacccatgccacccctgctgttgagcaggtctcccagcttctttcaatgcttcaccag
ggacaatatcaaccaaggccaagttttcgaggaaacaaatattccaggagctatagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagca
ggagacagtgattatgatttggggcgagattctccaatagacaggttgctgggcgaagga
ttcagcgacctgtttcttacagatggaagaattccagcagctatgaggctgtgcacggaa
gagtgcagggtcctgggacactctgaccagtgctggatgccacctctgccctcaccttcc
tctgattataggagtaacatgttcattccgggggaagaattcccagcacagccccagcag
caacatccgcatccgagtctcgaggatgacacccagccggtagattctggtgagaagaag
aagagtttttccacttttgggaaggactccccaaacgatgaggactctggggataccagc
acgtcctctctgctctcggaaatgagcaacgtgttccagcgcctcttacccccttccctg
gacacctattctgagtgcagtgagatggatcgatccaactctctggaacgccggaaggga
cctttatcagccaagactgtgggttacccacaaggggtggcggcctgggcggccagtacg
cattttcaaaaccccaccaccaactctggccccccacttggaactcattccagtgtgcag
ccttcttcaaaatggttgccggccatggaggagatccctgaaaattatgaagaggatgat
ttcgacaacgtgctcagccacctcggtgatggcaaacatgaactcatggatgccagtgag
ctagtggctgagattaacaaactgcttcaagatgtccgccagagctag
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