Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112399745
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Entry
112399745 CDS
T08872
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi05016
Huntington disease
nasi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
112399745 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
112399745 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112399745 (HTT)
04131 Membrane trafficking [BR:
nasi04131
]
112399745 (HTT)
03029 Mitochondrial biogenesis [BR:
nasi03029
]
112399745 (HTT)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112399745 (HTT)
Membrane trafficking [BR:
nasi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112399745 (HTT)
Mitochondrial biogenesis [BR:
nasi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112399745 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
112399745
NCBI-ProteinID:
XP_024600854
UniProt:
A0A341BF36
LinkDB
All DBs
Position
Unknown
AA seq
3165 aa
AA seq
DB search
MTLTTAPPLLAAPLVRALEERWGLRGRGGPRRRDGGRGRLAGAAPGQWRRPPPLAVNLAN
LAPPHDGASRDAGPRGLPGRTQDGRALRFRSCPCPRASFIAALPAVAEEPLHRPKKELSA
TKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESDVRMVADECLNKV
IKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLT
RTSKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANLKCSSPTVRRTAAGSA
VSICQHSRRTQYFYSWLLSVLLGLLVPVEEERSALLILGVLLTLRYLVPLLQQQVKDTSL
KGSFGVTRKEMEVSPSTEQLVQVYELTLHYTQHQDHNVVTGALELLQQLLRTPPPELLRV
LTTAGGIGQLTAAKAEPGCRSRSGSIVELIAGGGSSCSPVLSRKQKGRVLFGEAAALEDD
SESRSDGSSPTFAASVKGEIGGELAASSGVSTPGSAADSVGHDIITEQPRSQHTLQTDSV
DLTGCDLTSGATDGDEEDILSHSSSQMSAVPSDPAMDLNDGTQASSPISDSSQTTTEGPD
SAVTPSDSSEIVLDGADSQYPGMQVGQPQDEDEDAAVVLPDEDTEAFRNSSIALQQAHLL
QSMGHSRQPSDSSIDKFVSRDEAAEPGDPENKPCRIKGDIGQSSDEDSAPLVHCVRLLSA
SFLLTGEKHALVPDRDVRVSVKALALSCVGAAVALHPESFFGRLYRAPLDTMEYPEEQYV
SDILNYIDHGDPQVRGATAILCGTLVSSILSRSRFHVGDWMGTVRTLTGNTFSLADCIPL
LQKTLKDESSVTCKLACTAVRLCVMSLCSSSYSEWGLQLLTDMLALRSSSYWLVRTELLE
TVAEIDFRLVSFLEAKAENLHRRAHHYTGLLKLQERVLNNIVIYLLGDEDPRVRHVAAAS
LTRLVPKLFYKCDQGQADAVVAMARGQSSVHLKPLMHEAQPPSHFSASTITRIYRGYNLL
PSITDVTMENNLSRVIAAVSHELITSTTRALTFGCCEALCLLSTAFPVCIWSLGWHCGVP
PLSASDESRKSCTVGMATMILTLLSSAWFPLDLSAHQDALILAGNLLAASAPRSLRSSWA
SEEEASPAATKQEEVWPALGDRTLVPMVEQLFSHLLKVVNICAHVLDDVAPGPAIKAALP
SLTNPPSLSPIRRKGKEKEPGEQVSVPVSPKKGGEASPASRPSETSGPVPATKSSSLGSF
YHLPSYLKLHDVLKATHANYKVTLDLQSNTEKFGAFLRSALDVLSQILELATLQDIGKCV
EEILGYLKSCFSREPVMATVCVQQLLKTLFGTNLASQFDGLSSNPSKSQGRAQRLGSSSV
RPGLYHYCFMAPYTHFTQALADASLRNMVQAEQDHDTSGWFDVLQKVSTQLKTNLTSVAK
NRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQLRVNYCLLDSDQV
FIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMAS
GRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFIL
VLQQCHKESEDKWKRLSRQVADIILPMLARQQMHIDSHEALGVLNTLFEILAPSSLRPVD
MLLRSMFVTPDTLASVSTAQLWIAGILAILRVLISQSTEDIVLSRIQELSFSAHLLCCPI
INRLRDGGSNSVLEEHSEGRQTKDLPEETFSRFLLQLVGILLEDIVTKQLRVEMSEQQHT
FYCQELGTLLMCLIHIFKSGTFRRITAAASRLLTDGADGSFYGLESLNAWVRSMVPTHPA
LVLLWCQILLLVSHTDYRWWAEVQQTPRRRSLSSTKSLSPQMSGEDEDSDVASKLGICNR
EIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLISLSHEPPVQDFISAVHRNSAASG
LFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLAHMVDTL
ACRRVEMLLAANLQNSTAQLPAEELSRIQEHLQSSGLAQRHQRLYSLLDRLRLATAPASR
GPAPLVTPHPLDGDGPLALETVNPDKDWYVRLVKSQCWTRSDSALLEGAELVNRIPPGDL
NAFMMNSEFNLNLLAPCLGLGVREICAGRKSPLFAAARTATLDRVASVVQQLPAVHHVFQ
PFLPAEPTAYWSKLDDLFGDAVLYRTLTTLARALAQYLLVFSRLPSHLHLPPEKERDTVK
FVVMTLEALSWHLIHEQIPLSLDLQAGLDCCCLALQLPGLWSLLSSPEMVTHACSLIHCV
RFILEALVVQPGDQLLSPERRTNTPQAAREDEVDSNTQNPQYVTAACGMVAEMVEALPLV
LALGHKRNSSXXXXXXXXXXXXXXXXXXXXLVNSYTRVPPLVWKLGWSPKPGGDFGTVFP
EIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPLVMEQEESPPEEDT
ERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALGTRFGRKLSIIRGI
VEQEIQAMVSKRENIATHHLYQAWDPIPSLSPATTGALTSHDKLLLQVNPERELGNTSYN
LGQVSIRSVWLGSSVTPLREEEWAEEEEAPAPSSPPTSPVSARKHRAGVDIHSCSQFLLE
LYSRWILPSSSARRTPVILISEVVRSLLVVSDLFTERSQFETMYLTLTELRRVHPSEDEI
LQQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRSGHLPSRIGALHGVLYVLECDLLDD
TAKQLIPVISDYLLSSLKGAAHCVGIHSQQHVLVMCATAFYLIENYPLDVGPEFSAAIIQ
MCGVMLSGSEESTPSIVYHCVLRGLERLLLSEQLSRLDAESLVKLSVDRVNVHSPHRAMA
ALGLMLTCMYTGKEKISPGRTSDPSPAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVA
RILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYQVFQTLHSTGQSSMVRDWVM
LSLSNFTQRTPVAMAMWSLSCFFVSASTSPWVSAILPHVVSRMGKLEHVDVHLFCLVAAD
FYRHQIEEELDRRAFQSVFEVVAAPGNPYHRLLACLRNVHKVTTC
NT seq
9498 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcacgaccgccccgcccctcctcgccgcgcccctagtccgcgccctggaggag
cgctggggtctccgtggtcgcggcggtcctagaaggcgagacggcgggcgcgggagactg
gctggcgccgcgcccggccaatggcggaggccgccgcctctggctgtcaatctcgccaac
ctggccccgccccacgacggagcgtcgcgggacgcagggccgcgggggctgccgggacgg
acccaagatggccgagcgcttcggttccgctcctgcccgtgcccccgagcctcattcatt
gccgcgctgccggccgtggccgaggagccgctgcaccgaccaaagaaagaactctcagcc
accaagaaagaccgtgtaaatcattgtctgacgatatgtgaaaacatagtggcacagtct
ctcagaaattctccagaatttcagaaacttctgggcattgctatggaactttttctgctg
tgcagtgatgacgcagagtcagatgtcaggatggtggctgacgagtgcctcaacaaagtc
ataaaagctttgatggactccaatcttccgaggttacagttggaactctataaggaaatt
aagaagaacggcgctcctcggagcctgcgcgctgccctgtggaggtttgccgagctggct
cacctcgttcggcctcagaaatgcaggccttacttggtaaaccttttgccttgcctgacg
cgcacaagcaagagacccgaggagtctgtccaggagaccttggctgcagctgtccctaag
attatggcttcttttggcaattttgcaaacgacaatgaaattaaggttctgttgaaggct
ttcatagcgaatctgaagtgcagctctcctaccgtgcggcggacggcggccggctcggcg
gtgagcatctgccagcactccaggaggacgcagtacttttacagctggctgctcagtgtg
ctcttaggtttgctggttcccgtggaggaggaacgctccgcccttctgattctcggagtg
ctgctcacattgaggtatttggtgcccttgctgcagcagcaggtcaaggacacgagcctg
aaaggcagctttggggtgacgcggaaagagatggaggtctccccctcgacggagcagctt
gtccaggtgtacgaattgaccttgcattatactcagcaccaagaccacaatgttgtgact
ggggcgctggaactcctgcagcagctcctcagaacccctccacctgagctcctgcgagtg
ctgaccacggcgggcggcatcgggcagctcactgccgccaaggctgagcccggttgccga
agtcgtagcggaagtatcgtggagcttatagctggagggggttcttcatgcagccctgtc
ctttcaaggaaacaaaaagggagagtgctctttggagaagcagcagccttggaggatgac
tctgagtcaaggtcagacggcagcagccccacctttgcagcctcagtcaagggggagatt
ggtggtgagctggctgcctcttctggggtctccactcctggctcagctgccgactctgtg
ggtcacgacatcatcactgagcagccccggtcacagcacacacttcagacggactcggtg
gatctgaccggctgtgacttgacgagtggtgccactgacggggacgaggaggacatcttg
agccacagctccagccagatgagcgccgtcccgtctgaccctgccatggacctgaacgat
gggacccaggcctcctctcccatcagtgacagctcccagaccaccaccgaggggcccgat
tcagccgtgaccccttccgacagttctgaaattgtattagatggtgccgacagccagtac
ccagggatgcaagtggggcagccccaggacgaggacgaggacgctgctgtggttcttcct
gatgaagacacggaggctttcagaaactcttccatcgcccttcaacaagcacatttgttg
caaagcatgggccacagcaggcagccctctgacagcagtatagataaatttgtctcaaga
gatgaagctgctgagccaggagatccggaaaacaagccctgccggatcaaaggcgacatt
ggccagtccagcgatgaagattctgctcctcttgtccattgtgtccgccttctgtccgct
tcatttttgctaactggggaaaaacacgccttggttccggatagggacgtgagggtcagc
gtgaaggcactggcgctcagctgtgttggagctgctgtggcccttcaccctgaatctttc
ttcggcagactttacagagcaccgcttgacaccatggaataccctgaggagcagtacgtg
tcagacatcttgaactacatcgaccatggggacccacaggtcagaggagccacagctatc
ctctgtgggacccttgtctcctccatcctcagcaggtcccgcttccacgtgggagactgg
atgggcaccgtcagaaccctgacaggaaatacattttctctggcggactgcattcccctg
ctgcagaaaactttgaaggatgaatcttctgttacttgcaagttggcttgtacagctgtg
aggctctgcgtcatgagtctctgcagcagcagctacagcgagtgggggctgcagctcctc
accgacatgctggccctgcggagcagctcctactggctggtgaggacggagcttctggag
accgtggcagagatcgacttcaggttggtgagctttttggaggcaaaagcagaaaaccta
cacagaagggcccatcattatacagggcttttaaaactgcaagaacgagtgctcaataac
attgtcatctatttgcttggggatgaagaccccagggtgcgccatgttgctgcagcttcg
ttaacgaggcttgtcccgaagctgttttataagtgcgaccaaggacaggctgacgcagtc
gtggccatggcgagaggtcaaagcagcgttcacctgaagcctctcatgcacgaggcgcag
cctccatctcacttctccgccagcaccataaccagaatatatagaggctataacctacta
ccaagcataacagacgtcactatggaaaataacctttcgagagtcattgcagcagtttct
catgagctaatcacatcaaccacgagggcgctcacatttggatgctgtgaagctctgtgt
cttctttcaactgcctttccagtttgcatttggagtttaggttggcattgtggagtgccc
ccactgagcgcctctgatgagtctagaaagagctgtactgtgggcatggccacgatgatc
ctgaccctgctttcatcagcctggttcccactggatctctcagcccatcaagatgctttg
attttagccgggaacttgcttgcagccagtgcccccagatctctgaggagttcgtgggcc
tccgaagaagaggccagccctgcagccaccaagcaggaagaggtgtggccagctctgggt
gaccggaccctggtgcccatggtggagcagctcttctcccacctgctgaaggtggtcaac
atctgtgcacacgtcttggatgatgtggctcctggaccagcaataaaggcagccttgcca
tctctaacaaacccgccttctctgagtccaatccgacggaagggaaaagagaaggaaccc
ggagagcaggtgtctgtacccgtgagtcccaagaaaggcggtgaggccagtccagcctct
cggccatctgaaacctcagggcctgttccagcaaccaagtcctcgtcactggggagtttc
tatcaccttccttcttaccttaaattgcacgatgtcctgaaagctacacacgcaaactac
aaggtcaccttggatcttcagagcaacaccgaaaagtttggggcttttctgcgctctgcc
ttggatgttctctctcagattctagagttggcaacactgcaggacatcgggaagtgtgtc
gaagagatcctggggtacctgaaatcctgcttcagtcgagaaccagtgatggcaactgtt
tgtgtccagcagctgttgaagactctctttgggacaaacttggcctcccagtttgatggc
ttatcttccaaccccagcaagtctcaaggccgcgctcagcgccttggctcttccagcgtg
aggccgggcttgtaccactactgcttcatggctccgtacacccacttcacccaggcctta
gccgacgccagcctaaggaacatggtgcaggcagaacaggaccacgacacctcagggtgg
tttgacgtactccagaaagtgtctacccaattgaagacaaacctcaccagcgtcgcaaag
aaccgcgcggacaagaatgctattcataatcacattcgtttatttgagcctcttgttata
aaagctttaaaacagtacacgacaacaacctctgtgcagttacagaagcaggttttggat
ttgctggcgcagctggttcagttacgggttaactactgccttctggattccgatcaggtg
ttcattggatttgtgctgaagcagtttgaatacattgaagtaggccagttcagggaatca
gaggcaattattccaaacatctttttcttcctggtattactgtcttatgaacgctatcat
tcaaaacagatcattggaattcctaaaatcatccagctctgtgacggcatcatggccagt
gggaggaaagctgtgacacacgccataccagccctgcagcctatagtccacgacctgttc
gttttaagaggaaccaataaagctgatgcaggaaaagagcttgaaacccagaaggaggtg
gtggtgtccatgttactgaggcttatccagtaccatcaggtgttggagatgttcatcctg
gtcctgcagcagtgccacaaggagagcgaggacaagtggaagcggctgtctcggcaggta
gccgacatcatcctcccgatgttggccaggcaacagatgcacattgattctcacgaagca
cttggagtgttgaatacgttatttgagattttggccccttcctccctccgtcccgtggac
atgcttttacggagtatgttcgtcaccccagataccctggcatctgtgagcactgctcag
ctgtggatagccgggatcctagccattctgagggttctgatttcccagtcaactgaagac
attgttctttctcgcattcaggagctttccttctctgcgcatttactctgctgtccgata
attaataggttaagagatgggggcagtaattcagtactggaagaacacagtgaagggaga
caaacgaaggatttgccagaagaaacattttccaggtttctgctacaactggttggcatc
cttttagaggacattgttacgaaacagctaagagtggaaatgagtgaacagcagcatacc
ttctactgccaagaactaggcacgctgctcatgtgtttgatccacatcttcaagtctggg
acattccggagaatcaccgcagctgcctcgagactcttgacggacggcgcggacggcagc
ttctacggcctggagagcttgaacgcgtgggtgcgctccatggtccccacccacccggcc
ctcgtgctgctctggtgtcagatcctcctgctggtcagccacaccgactaccgctggtgg
gcagaggtgcagcagacccccagaagacgcagtctatccagcacgaagtcacttagtccc
cagatgtctggagaggacgaggattctgatgtggcttccaaactgggaatatgcaataga
gaaatagtacgaagaggagctctcattctcttctgcgattatgtctgccagaacctacac
gattcagagcacttaacgtggctcatcgtcaaccacattcaggacctgatcagcctgtcc
cacgagcctcctgtgcaggacttcattagtgctgtccatcggaattccgcggccagcggc
cttttcatccaggcaattcagtctcgttgtgaaaatctttcaactcccaccacgctgaag
aaaaccctccagtgcctggaggggatccacctgagccagtcgggcgccgtgctgacgctg
tacgtggacaagcttttgtgtactccgttccgtgtgctggctcacatggtcgacaccctt
gcttgtcgccgggtggagatgcttctggctgcaaatttacagaacagcacggcccagctg
ccggcggaagagctaagcaggatccaggagcacctgcagagcagcgggttagcgcagaga
caccaaaggctctactccctgctggacaggcttcgtctcgccactgcaccggcatcgcgt
ggccccgctcctctggtcacgccccacccgctggacggggacgggcccctggcactggag
acagtgaatcctgacaaagactggtacgtacgtctggttaaatcccagtgctggacgcgg
tcagactctgcactgctggaaggggcagagctggtgaatcggatccctccgggtgacttg
aacgcgttcatgatgaactcggagttcaacctgaacctgctagccccgtgcttgggcctg
ggcgtgcgtgagatctgtgcgggccggaagagcccccttttcgcagcagctcgcacggca
actctggaccgcgtggccagtgtggttcagcagctgcccgctgtccaccacgtcttccag
ccgttcctgcctgcagagcccaccgcctactggagcaagttggacgatctctttggggat
gccgtgctgtatcggaccctgaccactctggctcgggccctggcccagtacctgctggtg
ttctccagactgcccagccacttgcaccttcctcctgagaaggagagggataccgtgaag
tttgtggtcatgaccctcgaggccctgtcgtggcatttgatccacgagcagatcccactg
agtctggacctgcaggcgggcctggactgctgctgcctggccctgcagctgcccggcctc
tggagcctgctctcctcccctgagatggtgacccacgcctgctctctcatccactgtgtg
cggttcatcctagaagcccttgtggtgcagcctggggaccagcttcttagtccagaaaga
aggacgaacaccccacaggccgccagagaggacgaagtggattcaaacacacagaaccct
cagtatgtcactgcagcctgtgggatggtggccgagatggtggaggcactgccgttggtg
ctggccttgggtcataaaaggaacagcagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnccctcgtcaacagctacacgcgcgtcccgccc
ctggtgtggaagctcggatggtcacccaaaccaggaggggattttggcaccgtgttcccc
gagatccccgtggagttcctccaggaaaaggaagtcttcaaagagttcatctaccgcatc
aatacgctagggtggaccagccgtacccagtttgaggaaacgtgggccaccctcctcggt
gtcctggtgactcagcccctcgtgatggagcaagaggagagcccccccgaagaagacacg
gagaggacccagatccacgtcctggccgtgcaggccatcacctccctggtgctgagcgcg
atgactgtgcctgttgccggcaacccagccgtgagctgcctggagcagcagccccggaac
aagcccctgaaagctcttggcaccaggtttgggaggaagttgagcatcatcagaggaatc
gtagagcaggaaattcaagcgatggtttcaaagagggagaatatcgccacccatcacctg
taccaggcgtgggaccccatcccttctctgtctccagctactacaggtgccctcaccagc
cacgacaaactcctgctacaggtcaaccccgagcgggagctggggaacacgagctacaac
ctcggccaggtgtccatccgctccgtgtggctggggagcagcgtcacgcccctgagagag
gaggagtgggccgaggaggaggaggcccccgcgccgtcgtccccgcccacgtctccagtc
agcgccaggaaacaccgggctggagtcgacatccattcctgttcgcagtttttgctcgag
ttgtacagtcgctggatcctgccgtcaagttcagccaggaggactcccgtcatcctgatc
agcgaggtggtgcggtcgcttctcgtggtctcagacttgtttacggagcgcagccagttt
gagacgatgtacctgacgctgacggagctgcggagggtgcacccttcggaagacgagatt
ctccagcagtacctggtacccgccacctgcaaggcggccgccgtcctcgggatggacaag
gccgtggcagagccggtcagccggctgctggagagcacgctcaggagcggccatctgccc
agcaggatcggagccctgcacggcgtcctctacgtgctggagtgcgacctcctagacgac
accgcaaagcagctcatcccggtcatcagcgactatctcctgtccagcctcaaaggcgcg
gcccactgcgtgggcatccacagccagcagcacgtgctggtgatgtgtgccacggccttc
tacctgatcgagaactacccgctggacgtcgggccggagttctccgcggccataatacag
atgtgtggggtgatgctgtccggaagcgaggagtccaccccatccatcgtttaccactgt
gtcctgaggggcctggagcgcctcctgctctccgagcagctctcccggctggatgcggag
tccctggtcaagctgagcgtggacagagtgaacgtgcacagcccgcaccgcgccatggcg
gccctgggcctgatgctcacctgtatgtacacaggaaaagagaaaatcagtccaggcaga
acctcagaccccagccctgccgcccctgacagcgagtcagtgatcgtggccatggagcgt
gtgtctgttctttttgacaggatcaggaaggggtttccctgtgaagccagagtggtggcg
cggatcctcccccagtttctagatgacttcttcccgccccaggacgtcatgaacaaggtc
attggagagtttctttccaaccagcaaccgtacccgcagttcatggccaccgtagtgtac
caggtgttccagactttgcatagcacagggcagtcgtccatggtccgggactgggtcatg
ctgtccctctccaacttcacgcagaggactccagttgccatggccatgtggagcctctcc
tgcttctttgtcagcgcttccaccagcccgtgggtttcggcgatccttccccacgtcgtg
agcaggatgggcaagctggagcacgtggacgtgcacctcttctgcctggtggccgcggac
ttctacagacaccagatagaggaggagctcgaccgcagggccttccagtctgtgttcgag
gtggtcgcggcgccaggaaacccgtatcaccgcctgctggcttgtttgcggaacgtccac
aaggtcaccacgtgctga
DBGET
integrated database retrieval system
