Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112399758
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Entry
112399758 CDS
T08872
Symbol
PABPC4L
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03015
mRNA surveillance pathway
nasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112399758 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
112399758 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112399758 (PABPC4L)
03041 Spliceosome [BR:
nasi03041
]
112399758 (PABPC4L)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112399758 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
112399758 (PABPC4L)
Spliceosome [BR:
nasi03041
]
Complex C
Other components
Complex C specific factors
112399758 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
RRM_7
RRM_10
RRM_occluded
RBD_DEAH11
Nup35_RRM_2
RBD_RDR6
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
112399758
NCBI-ProteinID:
XP_024600881
UniProt:
A0A341BDC3
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MNRLAWPQSADSEATTLEPGLPSCRSHSRSSRDRLAAVRSQEMHVAAKYRQASLYVGDLH
ADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDTMNFDPIKG
KSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSSFGKILSSKVMSDDHGSRG
YAFVHFQNQIAADRAIQEMNGALLKDCRLFVGRFKSRKDREAELQNKASEFTNVYIKNFG
DDMDDERLREVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHGAAKKAVEEMNGKDINGQ
LLFVGRAQKKAERQAELKQMFEQLKQERFRRCRGAKLYIKNLDETIDDEKLRREFSSFGS
ISRVKVMQEEGRSKGFGLICFSSPEEATKAMTEMNGHILGSKPLNIALAQRP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcctcgcctggcctcagagcgctgactctgaggccaccacgcttgagcccggg
ctaccctcctgcagaagtcactccaggagctccagggaccggcttgcggcggtgaggagc
caggagatgcatgtagcagccaagtaccgccaggcctccctgtacgtgggtgacctccac
gcggacgtcaccgaggacctgctgttcaagaagttcagcgctgtggggcccgtgctgtcc
atccgcatctgcagggacctggtcacccgccgctctctgggctatgcctacgtgaacttt
ctgcagctggcggatgcccagaaggccctggacactatgaactttgacccgataaagggc
aaatccatccgtctcatgtggtctcagcgtgacgcctacttgaggaaatctggaattggg
aacgtgttcatcaagaatctggacaaatccattgataacaaaaccctttatgaacacttt
tcgtcttttgggaagatcctgtcctccaaggtgatgagtgatgatcacggctccaggggc
tatgcgttcgtgcactttcagaaccagattgccgccgacagggccatccaggagatgaat
ggggcactgcttaaggactgcaggctgtttgttggcagattcaagagccgcaaagatcgg
gaagccgagctccaaaacaaagccagtgagttcaccaatgtttacattaaaaacttcgga
gatgacatggatgatgagagactgagggaagttttcagcaaatatggaaaaaccctgagt
gttaaggtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgat
agccacggggctgccaaaaaggctgttgaagaaatgaatggaaaggacataaatggacaa
ctgctttttgtaggccgggcacaaaagaaagcagaacgacaggctgagttaaagcaaatg
tttgagcagctgaaacaggaaagatttcggcggtgccggggagcaaagctctatattaag
aacctggatgagaccattgatgatgaaaagctacggagggaattttcttcatttggatca
attagcagagttaaggtaatgcaggaagaagggcgaagcaaagggtttggcttgatctgc
ttctcctctcctgaggaggccactaaagcaatgactgagatgaatggccacatcttgggc
tccaagccgctcaacatcgccctggcccagaggccctag
DBGET
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