Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112401239
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Entry
112401239 CDS
T08872
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nasi03036
]
112401239 (CHD9)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112401239 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
112401239
NCBI-ProteinID:
XP_024603106
UniProt:
A0A341BK58
LinkDB
All DBs
Position
Unknown
AA seq
2902 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISSQNGSPFHQQGHSHSMHQTKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPPQINNASTSQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQSSAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLHSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFSDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQF
DESAFGQDNSSHVLDHDLDRQFTSHLVTRPSDVAQTQLHTQARSWHSSLSNHQHLHDRNR
LCLQRQPPSSKKSDGPGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKPCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEISDTEQVPQHAFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
KGSIKIKKHSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIIKKEISPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCERSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKDELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDPK
GIILEDVKVKSENLKEEPQFSEEESMTSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSDSSSDSDSDSERSSCSSRSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHVKAYD
EESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANAVASFYTTKLLDSSGAATEYSEPSVPTPAGAGVKEEHDQSTQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGLAQRRPLDSEDGALGQQQYLTRLRDLQGASETS
LASFPKSMPVSGTPIQSTLGANGVLLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVT
LGLTTSQISTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAF
APPLKDLCRFLKENTEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKS
GIAKATAAAAAATATSISGSPLLANGLLPGVDLPTLQALQQNLQNLQSLQVTAGLMGMPA
GLSSGGEAKNVAAMFPMLLSGMTGLPNLLGMGGPLTKPTESGTEEKKGNDSTELEGKKER
TESQNSENGGESSVSSSPSTSSTAALSAAAAANPLALNPLLLSNILYPGMLLTPGLNLHI
PTLSQSNTFDVQKNKNSDLGSSKSVEVKEEDSRVGDQEDKGGTEPSPLNENSTDEGSEKA
DASSGSDSTPSSSEDSDSSNED
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctgtttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgttcaaggtactcca
acacatcagaagatgactgactatgaacagttaaatcagtttgattcaatgaaatttcac
caagttaatcagtcttttggcagcccagctgaacatgtgttatctccacactctcagttt
aactgttctccgatccaccctcagaaccagcccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctactagcatttcaagtcaaaatgggtctcct
tttcaccaacaaggacattctcactctatgcatcaaactaaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcgctacgctcacaa
caaaacagaaataatcttaacccagggcaaaattctcttagccagtctaaaaattttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaattaataat
gcatctacttcacagcagtccctttcgatgcagcaattttctcaaacgtcaaatccttca
gtacacttcctgaagtgtagcaatcatcaagaaggaaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatgtgtcaccaaatagtcttcttcagtcctctgcagttcttgcacctaatcataca
aatcagactttatctgattttactgggagtaattccttttcacctcataggggaatcaag
caagaatcgactcagcatatgctaaatcccaatacatcgctgcattcaaataacttccaa
atgttgcattcatcacatcctcagggtaattacagcaattcaaaattatctcctgttcac
atgaacttcccagatcctgttgactcaggaactcaaatgggccatttcagtgatcatgta
gaaactaatggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaact
gagccattcacaggacttgacccagaagacctccttcaggagggtctccttccccaattt
gatgagtcagcatttggacaagataattcaagtcatgttttagatcatgaccttgatcgg
caatttacttcacatctcgtaacacggccttctgatgtggctcaaactcagttgcatact
caggctcggagttggcattcatcactttctaatcatcagcatttacatgacagaaatcgc
ctatgtttacagcgacagcctccatcttccaagaagagtgatggtcctgggacatatact
aagttgcagaatacccaggtgaggatcatgtctgagaagaagcagagaaaaaaggtggaa
tcagaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaag
gagcgtggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttca
gttgaaggaaaagaggaaaagaaaggtagaaggatgaaatctaagccaaaggataaagag
agcaaaaaaacaaaaccttgttctaagttaaaagagaagacaaaaattggcaaactcatt
attacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgataca
gagcaggtgccacagcatgcattcaaagaggaagactctcaaaaaagaagatcaaatcga
caaattaaaagaaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggtt
aaaggctctataaaaataaaaaagcattcagctcctttacctggtgaacagcctttacag
ttatttgtggagaatccgagtgaagaagatgctgcaattgtggacaaaatactatcttct
agaattataaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccacagaacagcagcttctgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgcagacatggaagaagaaccatttaacccagactacgttgaagtagacagagta
ttagaagtctctttttgtgaagataaagatactggtgagcctgttatttactacttagta
aagtggtgctcattaccatatgaagacagtacttgggaactaaaagaagatgtagatctt
gcaaaaatagaagagtttgaacagttgcaagcttcacggcctgacacaagacatttggac
cgtcctccttctaatatttggaaaaaaatagatcaatccagggattataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttattcaactggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccactttct
actattgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttat
catgggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactca
caggggcgaatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggaggctgtggagagcttaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaactgtaaacttctagaaggtctgaaactcatgaatctg
gagcacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagt
cttcttcactttctggaacccttaaggtttccttctgaatcaacgttcatgcaagaattt
ggagatctgaaaacagaggaacaggtgcagaaacttcaggctatcttgaaaccaatgatg
ttgagacgattgaaagaagacgtggaaaagaagttggcacctaaggaagaaaccatcatt
gaagtggaacttactaacattcagaagaaatactaccgggctattctggagaagaacttc
tcatttttatccaaaggagcagggcagactaatgtacccaacttggtcaataccatgatg
gagctcaggaagtgctgtaatcacccatatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtccttattgataaattgcttcctaaaatgaaagcaggaggt
cataaagtgctcatcttctctcagatggtacgctgccttgatatcctggaggactatctt
atacataaaagatatttatatgagcgaattgatggaagagtcagagggaatcttcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgtctttcttctgtgtacc
cgagctggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattct
gattggaatcctcaaaacgaccttcaggcccaagctcgttgccacagaatcggtcagaat
aaagcagttaaagtctaccgactagtaactcgtaactcatatgaaagagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtattacagagcatgagtggaagagaa
agtaatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaaga
ggtgcttatggtgccattatggaagaagaagatgaaggctctaaattctgtgaagaagat
attgatcagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtggg
tcaacatttgcaaaggcaagttttgtggcatctggaaatcgaacagatatttccttagat
gatcccaacttctggcaaaaatgggcaaaaaaggcagaaatagatatagatgccatcagt
ggtagaaacagcttggttattgacactccaagaattaggaagcaaacaagacccttcagt
gctacaaaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagccc
aaactccggagaccctgtgagcgttcgaatggctatggaagaactgaatgctttagagta
gagaaaaatctgctagtttatgggtggggccgatggagagagattctgtctcatggccgt
tttaaaaggcagctaaatgagcacgatgtggaaataatttgccgagccctcttagcttat
tgccttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattact
ccaaccgaagatgggcagacacgagagctacaaaatcatctaggcctgtcagcccctgta
cccagaggtcgaaaagggaagaaagtaaagactcaaacaagctcatttgatatacaaaaa
gcagaatggcttcgaaaatacaatcctgagcagctacttcaagatgaaggctacaaaaaa
catataaaacaccactgtaataaagttttgcttcgtgtaagaatgctgtattatctaaag
caagaagtcattggaaatgagtgtcagaaagtgtttgatggagttgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggattttgat
gctgataagtcactccttattggagtttttaaacatggttatgaaaaatataacactatc
cgagcagacccggcattatgcttcttggaaagagtgggaaaacctgatgagaaagcagtt
gctgcagaacagagggcgaacgattatatggatggggatgtggaagatccagaatacaaa
cctgccccagctatctttaaagatgatatagaggatgatgtttcctcaccaggagatctt
gttatagcagatggagatggtcaactgatggagggtgataaaatttattggcctactcag
tcagctttaaccacacgtttgaggcgtctcatcactgcatatcagcgtactaataaaaac
agacaaatccagcagatacaacctactttctcagtgcctgccagtgttatgcagcctctt
tatgaagaagccactcttaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaagaagagaagaagctgacttttatagagttgtatctacatttggagtggtgtttgat
cctgacagaggccaatttgattggacaaaatttagagctatggctaggctacataagaaa
actgatgatagtttggagaaatatttgtatgcatttatgtctatgtgtcggagggtttgt
cgtcttccttccaaagatgaattggtggatccaaatatttttatccagccaatcacagaa
gaacgtgcttctaggactttatatcgcattgaacttctaaggaaagtaagggaacaggcc
ctccgacatccacagttgtttgagcgcttgaagctttgccatccaaatccagacttacca
gtctggtgggagtgtggccctcatgatagggacttgctcattggagctgctaaacacggg
gtgagccgaacagactatcacattcttcgtgatcctgaactctcatttatggcagctcaa
aggaactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagatcctaaa
ggtattattctagaggatgtgaaagttaaaagtgaaaaccttaaagaggagcctcagttt
tctgaagaagaatctatgacttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagagcctctaactccaaacccagcttct
aagaagcagcgagtccacaaaagaggatcagactctagttctgattctgactctgattct
gagagatcgtcctgttcttccagatcatcttcttcctcgtcttcctcttcttcttgttcc
cactctcgatcaggctctagctcttcttcttcctcctcttgttcttcagcatcatcttca
tcctcatcctcgtcctcctcttcctcatcatcctcctcatcttcatcagaagaaagtgac
agtgaagaagaggaagtccaaaagcgagcagaaggtacccctcacgtgaaagcctatgat
gaagaaagcgtcgcatcactgagcactacccaggatgagacccaggatagtttccagatg
aacaacgggaccccagagtctgcttacatcctacaaggtggatacatgctggccgcttcg
tactggccaaaggaccgtgtgatgatcaaccggttggacagtatttgtcaaacagtcctg
aaagggaagtggccttcagctagaagaagttatgatgccaatgcagtggcttctttctat
accacaaagctgctggacagctctggcgcagctacagaatatagcgagcccagcgtgccc
actcctgcaggtgctggcgttaaagaagaacacgatcagtcaacacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaag
ttgacatttcagaagcaagggcttgctcagagaaggccgttggacagtgaagatggtgct
ctagggcagcagcagtacctcactcgacttcgggaccttcaaggtgcgtcagagaccagc
ctcgccagttttccaaaatccatgccagtgtcaggtactcccattcaatcaacccttggt
gccaatggagttttattagacaaccagcctgtagtcaaaaaaaggcggggaaggaggaag
aatgtagaaggtgttgacatcctctttttcaacagaaataaaccacctaatcatgttacg
ttaggcttaaccacctcacagatttctacagggataaatccagcactatcctatactcaa
cctcaaggaattcctgatacagaaagtcccgttccagttattaatcttaaagatgggaca
agacttgcaggcgatgatgcaccgaagagaaaggatttggaaaaatggcttaaggagcac
ccaggttatgtggaagatttaggagcttttattcctagaatgcagctccatgaggggaga
cccaagcaaaaaaggcatcgttgcagaaaccccaataaactagatgtgaatagtctcact
ggagaagaacgtgttcagctgattaacagaagaaatgccagaaaggttggaggtgccttt
gctccccctctgaaagatttatgtcggttcctgaaagaaaatacagaatatggagtagct
cctgaatggggagatgttgttaagcagtctggatttcttccagaaagtatgtatgaacgt
attctcactggtcccgttgtgagagaggaagtaagcaggcgagggagacggcctaaaagt
ggaattgcaaaggccaccgcggcagcggcagctgcaactgccaccagtatttcaggcagt
cctttattagccaatggattacttccaggtgtggacctcccaactcttcaggccttacaa
caaaacctacaaaacttgcagtcactgcaagtgactgcagggctcatgggaatgcctgct
ggcctttcttctggaggagaagctaaaaacgtggctgccatgttccccatgctgctgtca
ggaatgactggattgccaaatctgttgggcatgggaggacccctgacaaagcctacagaa
tctggaacagaagaaaaaaagggaaatgactctacggagctagaaggaaaaaaagaaagg
acagagagccaaaattcagagaatggtggtgaaagctctgtgtcaagttctccttcaaca
tcctctactgctgcattaagtgcagctgcagctgccaacccgttagctcttaacccacta
ttactatccaatatactttatccagggatgcttctcactccaggccttaatcttcatatt
ccaactttgtcccagtccaatacttttgatgtacagaaaaataaaaacagtgacttaggc
tcatctaagtctgtagaagtaaaggaagaagattccagagttggagatcaggaagacaaa
gggggaactgaaccgagtcctctcaatgaaaacagcacagatgagggttcagagaaagct
gatgcttcatctggatctgatagtacaccatcgtcatctgaggattcagattcgagtaat
gaagactga
DBGET
integrated database retrieval system
