Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112401566
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Entry
112401566 CDS
T08872
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03082
ATP-dependent chromatin remodeling
nasi04714
Thermogenesis
nasi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112401566 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
112401566 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
112401566 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nasi03000
]
112401566 (ARID1B)
03021 Transcription machinery [BR:
nasi03021
]
112401566 (ARID1B)
03036 Chromosome and associated proteins [BR:
nasi03036
]
112401566 (ARID1B)
Transcription factors [BR:
nasi03000
]
Eukaryotic type
Helix-turn-helix
ARID
112401566 (ARID1B)
Transcription machinery [BR:
nasi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112401566 (ARID1B)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112401566 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
112401566
NCBI-ProteinID:
XP_024603624
UniProt:
A0A341BN33
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MDPMVMKRPQLYGMGSNPHSQPQQSSPYPAGSYGPPGPQRYPIGIQGRTPGAMGGMQYPQ
QQVPPQYGQPGVSGYCQQGQQPYYSQQPQAQYLPSQPQQRYQPQQDMSQEGYGTRSQPPL
APGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQ
SPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSS
HPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGISSFQQSNSS
GTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANSQMHGQGPSQPCGAMPLG
RMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAASSA
QSRQGGFPGVNQSGLMASSSPYSQPMSNSSGLMNTQAPPYSMTPNMVNSSTDMMSPGESK
LPLPLKADGKEEGTAQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDES
DSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSL
PAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLF
AFECKTERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDL
KPPTPASTPHGQITPMQGASFRVSRLIRSSTVSVHDPFSDASDSSFPKRNSMTPSAPYQQ
GMSVPEVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPASSMQDMYNQSPSGAMSSLG
MGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPAYGGHQPGLYPQQTNYKRHMDGMYGP
PAKRHEGDMYNMQYGNQQQEMYNQYGSSYSGPDRRPIQGQYPYPYTRERMQGPGQIQAHG
IPPQMMGGPMQSSSSEGPQQSMWATRNDMPYPYQSRQGPGGPAQTPPYPGMNRTDDMMVP
DQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQRS
LESRMSPSKSPFLPSMKMQKVMPTVPTAQVTGPAPQPPPVRREITFPPGSVEASQPVLKQ
RRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLEL
LVEYFRKCLIDIFGILMEYEVGDPSQKALDHSVVKRDDSQSLADDSGKEEEDAECMDEEE
DEEEDEEEDGGKAETEDRSSTALASPDATADPKEKPRQASKFDKLPIKIVKKNNLFVVDR
SDKLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSATGRKKEQEGK
GDPEEQQEKSIIATIDDVLSARPGALPEDANPGTQTESSKFPFGIHQAKSHRNIKLLEDE
PRSRDEAPLCTVAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLH
HEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTE
SICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILAT
PPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISF
LEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRL
LDISISAVLNSLVASVICDVLFQIGQL
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatggtgatgaagagacctcagctgtatgggatgggcagtaaccctcattct
cagccacagcagagcagcccttacccggcaggttcctacggccccccaggcccacagcgg
tatccgattggcattcaaggtcggaccccaggggccatgggaggaatgcagtacccacag
cagcaggtgccgcctcagtatggccagccaggtgtgagcggttactgccagcagggccag
cagccttactacagccagcagccgcaggcgcagtatctgccgtcccagccccagcagagg
taccagccgcagcaggatatgtctcaggaaggctatggaactaggtctcaacctcctctg
gctcctggaaaacccaaccatgaagacttgaacttaatacaacaagaaagaccatcaagt
ttaccagacctgtctggctccattgatgacctccccacgggaacggaagcaactttgagc
tcagcagtcagtgcatccgggtccacgagcagccaaggggatcagagcaacccagctcag
tcgcctttctctccacacgcatctccccatctctccagcatccctgggggcccatcgcct
tctcctgtcggctctcctgtaggaagcaaccagtcacgatctggcccaatttctcctgca
agtattccaggcagtcagatgcctcctcagccacctgggagccagtcagaatccagttct
catcctgccttgagccagtcaccaatgccacaggaaagaggttttatggcaggcacacaa
agaaaccctcagatgtctcaatatggacctcaacagacaggaccatccatgtcgcctcat
ccttctcctggaggccagatgcatcctggaatcagtagctttcagcagagtaactcaagt
gggacttacggtccacagatgagccagtatggaccacaaggtaactactccagaccccca
acatatagtggggtgcccagtgcaagctacagcggcccagggcccggcatgggcatcaat
gccaacagccagatgcatggacaagggccaagccagccgtgtggtgctatgcccctggga
cgaatgccatcagctgggatgcagaacagaccctttcctggaaatatgagcagcatgacc
cctagttctcctggcatgtctcagcagggagggccaggaatggggccaccaatgccaacc
gtgaaccgtaaggcacaggaggcagctgccgcagtgatgcaggccgctgcgagctcggca
caaagcaggcaaggcggctttcccggcgtgaatcagagcggactcatggcttccagctct
ccctacagccagcccatgagcaacagctctgggctgatgaacacccaggcgcccccctac
agcatgacgcccaatatggtgaacagctccacagatatgatgtctcctggtgaatccaaa
ctgcccctgcctctcaaagcagatggtaaagaagaaggcactgcacagccggagagcaag
tcgaaggatagctacagctctcagggtatttctcagcccccaacccccggcaacctgcca
gtcccttccccaatgtcccccagctctgctagcatctcctcatttcatggagatgaaagt
gatagcattagcagcccaggctggccaaagactccatcaagccctaagtccagctcatcc
accaccactggcgaaaagatcacaaaggtgtatgaattggggaatgagccagagagaaag
ctgtgggtagaccgatacctcaccttcatggaggagagaggctccccggtctcaagtctg
cctgcggtgggcaagaagcccttggacctgttccgactctatgtctgcgttaaagagatt
ggaggtttggcacaggttaataaaaacaagaagtggcgtgagctggcaaccaacctaaat
gttggcacttcaagcagtgcagcgagctccctgaaaaagcagtatattcagtacctgttt
gcctttgagtgcaagactgagcgaggggaggagcccccgccggaagtcttcagcacggga
gacaccaagaagcagcccaagctccagccgccctctcctgctaactcaggatccttgcaa
ggtccacagactccccagtcaactggcagtaattccatggcagaggttccaggtgacctg
aagccacctactccggcctccacccctcatggacagattaccccaatgcaaggtgcaagc
tttcgtgtctctcgtcttatcagaagcagtacagtcagtgtgcacgacccattctcagac
gcaagtgattcatctttcccaaaacgcaactccatgactccgagcgccccataccagcag
ggcatgagcgtgccagaagtgatgggcaggatgccctacgagcccaacaaggaccccttt
ggaggaatgagaaaagtgcctggaagtagtgagccgtttatgacgcaaggacagatgccc
gccagcagcatgcaggacatgtataaccagagtccgtctggagcgatgtccagtctgggc
atggggcagcgccagcagttcccctatggagccagttacgatcgaaggcatgaaccttac
gggcaacagtacccaggccaaggccctccctcaggacagccagcatatggaggacaccag
ccgggcctgtatccacagcagacgaattacaagcgccatatggatggcatgtatgggcct
ccagccaaacgccacgagggagacatgtacaacatgcagtacggcaaccagcagcaagag
atgtataaccagtacggaagttcctactccggacccgacaggaggcccatccagggacag
tacccgtacccctacaccagagagaggatgcaaggcccggggcagatacaggctcacggg
atcccacctcagatgatgggcggcccaatgcagtcgtcttccagcgaagggcctcagcag
agtatgtgggcgacacgcaacgatatgccttatccctaccagagcaggcaaggccccggc
ggccctgcacagacacctccttacccaggcatgaaccgcacggacgacatgatggtacct
gatcaaaggataaaccacgagagccagtggccttctcacgtcagccagcgtcagccttac
atgtcctcttcagcctccatgcagcccatcacgcgcccgcctcagtcatcctaccagacg
ccaccgtcgctgccaaatcatatctccagggcgcccagccccgcctccttccagcgctcc
ctggagagccgcatgtctcccagcaagtctcccttcctcccctccatgaagatgcagaag
gtcatgcccaccgtccccacggcccaggtcacggggccggccccccagccgcccccagtc
agaagggagattacctttcctcctggctctgtggaagcatcacagcccgtcttgaaacaa
aggcggaagattacctcaaaagatattgttactcctgaggcctggcgtgtgatgatgtcc
ctgaagtcaggtcttctggctgaaagtacttgggctttggacactattaatattcttcta
tatgatgacagcactgtcgctactttcaatctctcccagttgtccggatttctcgaactt
ttagtagagtactttaggaaatgcctgattgacattttcgggattcttatggaatatgaa
gtgggagaccccagccaaaaagcacttgatcacagtgtggtaaagagagatgacagccag
tccttggccgacgattctgggaaagaggaagaagatgccgaatgtatggatgaggaggaa
gacgaggaggaagacgaggaggaagacggtgggaaggcggagactgaggacaggagcagc
acggccttggcctcccccgatgccaccgcggatccaaaggagaagcccaggcaagccagt
aagttcgacaagctgccaataaagatagtcaaaaagaacaacctgtttgtcgtcgaccgg
tctgacaagctgggtcgtgttcaggagttcagcagtggacttctgcactggcagctcggt
ggtggggacaccaccgagcacatccagactcactttgagagcaagatggaaattcctcct
cgcaggcgtccacctccccctttaagcgccacaggtagaaagaaagagcaagaaggcaaa
ggggatcctgaagagcagcaagagaagagcatcattgcaaccattgatgacgtcctgtct
gctcggccaggggctcttcctgaagacgcaaaccctggtacccaaaccgaaagcagtaag
tttccctttggaatccatcaagccaaaagtcaccgcaatatcaagctgctggaggacgag
ccgaggagccgggacgaggctccgctctgcaccgtcgcgcactggcaggactcgctggct
aagcgctgcatctgcgtgtcgaatattgtccggagcttgtcttttgtgcctgggaatgac
gctgaaatgtccaaacatccaggcttggtgctgatcctggggaagctgattcttcttcac
cacgagcatcccgagagaaaacgagcgccgcagacctatgagaaggaggaagacgaggac
aaaggggtggcctgcagcaaagatgagtggtggtgggactgcctcgaggtcttaagggat
aacacgttggtcaccttggccaacatttctgggcagctagacttgtctgcttacacggaa
agcatctgcttgccaatattggatggcttgctgcactggatggtgtgcccgtcagcagag
gcacaagacccctttcccactgtgggacccaactctgtcctgtcgcctcagagacttgtg
ctggagacgctctgtaaactcagcatccaggacaacaatgtggacctgatcttggctacg
cctccatttagtcgtcaggagaaattctatgccacgttagttaggtacgttggggatcgc
aaaaacccagtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaaggggac
gcgctggctgcaagggcaatagctgtgcagaaaggaagcatcgggaacttgataagcttc
ctagaggatggggtcacgatggcccagtatcagcagagccagcataacctcatgcacatg
cagcccccgcctctagagccccctagcgtggacatgatgtgcagggcggccaaggctctg
ctggccatggccagagtggacgagaaccgctcagagttccttctgcacgagggtcgattg
ctggatatctcgatatcagccgtcctgaactctctggttgcgtctgtcatctgtgatgta
ctgtttcagattgggcagttatga
DBGET
integrated database retrieval system
