KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112401894
Entry
112401894         CDS       T08872                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04710  Circadian rhythm
nasi04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    112401894 (PER1)
   04713 Circadian entrainment
    112401894 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nasi03400]
    112401894 (PER1)
DNA repair and recombination proteins [BR:nasi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    112401894 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 112401894
NCBI-ProteinID: XP_024604193
UniProt: A0A341BN61
LinkDB
Position
Unknown
AA seq 1211 aa
MSGPLEGADGGGDPRPGESFCPGGAPSPGPPQHRPCPGPSVADDTDANSNGSSGNESNGP
ESRGASQRSSHSSSSGNGKDSALLDTTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGV
LLRCKQDVFRGARFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGLKDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVADGAPAQPCCLLLAERVHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPVPSPAL
SLDPDIQELSEQIHRLLLQPVHSPSPTGFCGVGQVTSPGPLLSPGSSSASNGGDAEGPGP
PAPVTFQQICKDVHLVKHQGQQLFIESRARPLPQPHVPATGTFKAKTLPCQSADPELEVA
PALTQAPLALAPEEAERKEASSCSYQQINCLDSILRYLESCNLPSTTKRKCTSSSSCTAS
SASDEDRQRAGAVSVGAEKDTSAVLSGEGAAPLKEPVVGGGALSPLALANKAESVVSVTS
QCSFSSTIVHVGDKKPPESDIIMMEDLPGLPPGPAPSPAPSPTVAPDPATGAYRPVGLTK
AVLSLHTQKEEQAFLSRFRDLGRLRGLDGSSTAPSGPGCRHGPAAPGRRHHCRSKAKRSR
QHQNPQAEAPCHVSHPSPVPSSAPWPPPAATPPFPAVVQPCPLPAFSPRGGPQPLPPSPP
RRPDSLLFNSRCSSPLQLNLLQLEESPRVEGSSAARPPPSEETADPAARPVEITESSNQD
ALSGSSDLLELLLQEDSRSGTGSAASGSLGSGSGSGSHEGSSTSASITRSSQSSHTSKYF
GSVDSSEAEAGAARARAEPGDQVIKYVLQDPIWLLMANADQHVMMTYQVPSRDMASVLKQ
DRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMACVDCGSSTQDPGHPDDP
LFSEMDGLGLEPMEEGGGEAGGGGGEGEGGDEAQAQAGATVSSSQDLAMEEEGQGGSSSS
PALPAAENGTS
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgagcggccccctcgaaggggctgatgggggaggggacccgaggccgggggaatccttt
tgtcctggaggggctccatcccctgggcctccacagcatcgaccttgtcctggccccagc
gtggctgacgacacggatgccaacagcaatggctccagcggcaatgagtccaatggaccg
gagtccaggggtgcatctcagcggagctcacatagctcctcctcaggcaatggcaaggac
tcggcccttctggacaccactgaaagcagcaagagcacaaactctcagagcccatcccca
cccagcagttccattgcctacagcctcctgagtgccagctcagagcaggacaacccgtct
accagtggctgcagcagtgaacagtcagctcgggcaaggacccagaaagaactcatgacg
gcgctgcgggagctcaagcttcggctgccaccagagcgcaggggcaagggccgctctggg
accctggccacgctgcagtacgcactggcctgtgtcaagcaggtgcaagccaaccaggaa
tactaccagcagtggagcctggaggagggcgagccttgtgccatggacatgtccacctac
actctggaggaactggagcacatcacatctgagtacacgcttcgcaaccaggatactttc
tccgtggctgtctccttcctgacaggccgcatcgtctacatttctgagcaggcaggtgtc
ctgctgcgctgcaagcaggatgtgttccgcggtgcccgcttctcagagctcctggctccc
caggatgtgggcgtcttctatggttccactgccccatctcgcctgcccacctggggcacg
ggggcctcggcaggttcaggcctcaaggacttcacccaggagaagtctgtcttctgccgt
atcagagggggtcccgaccgagatcccgggcctcggtaccagccattccgcctaacccca
tatgtgaccaagatccgggtcgctgatggggcccctgcacagccgtgctgcctgctgctt
gcagagcgcgttcactctggttatgaagctccccggattccccccgacaagaggatcttc
actacaaggcacacgcccagctgcctcttccaggatgtggatgaaagggccgccccgttg
ctgggctacctcccccaggacctcctgggggccccagtgctccttttcctgcatcctgag
gaccgacccctcatgctggccatccacaagaagatcctgcagctggctggccagcccttt
gaccactcccctatccgcttctgcgcccggaatggggagtacgtcaccatggacaccagc
tgggctggcttcgtgcacccctggagccgcaaggtggcctttgtgttgggccgccacaaa
gtacgcacggcgcccctgaatgaagacgtgttcactcccccagtccccagtcccgctctc
tccctggaccctgatatccaggagctctctgagcagatccaccggctgctgttacagcct
gtgcacagccccagccctaccgggttctgtggagtcggccaggtgacttccccaggccct
ctcctcagccctggctcctccagtgccagcaacgggggtgacgccgagggacctgggcct
cctgcgccggtgaccttccagcagatctgtaaggatgtgcacctggtgaagcatcagggg
cagcagctttttattgagtcccgggcccggcctctgccccagccccatgtccctgctaca
ggcacgttcaaggccaagacacttccctgccaatctgcagacccagagctggaggtggcc
cctgctctgacccaggccccgctagccttggctcctgaggaggctgagcggaaagaagcc
tccagttgctcctaccagcagatcaactgcctggacagcatcctcaggtacctggagagc
tgcaacctccccagcacgaccaagcgcaaatgcacctcctcctcgtcctgcaccgcctct
tcggcctccgacgaggacaggcagcgggcgggagcggtctctgtgggggccgagaaagat
acatcggcagtgctgtctggggagggggctgcccctctgaaggagccggtggtgggagga
ggcgccctgagcccgctcgccctggccaataaggcggagagtgtggtgtccgtcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggaatcggac
atcatcatgatggaggacctgcctggcctgcctcccggcccagctcccagcccagccccc
agccccacggtggcccctgacccagccacaggtgcctaccggccagtgggcctgaccaag
gctgtgctgtccctgcacacccagaaggaggagcaggccttcctcagccgtttccgcgac
ctcggcaggctgcgtggacttgacggctcctccacggccccctcgggccccggctgccgc
cacggccccgcagcccccggccgccgccaccactgccgatccaaagccaagcgctcccgc
cagcaccagaaccctcaggccgaagccccctgccacgtctcccacccatcacctgtgcca
tcctctgccccctggcccccaccagcagccacaccgcccttcccggctgtggtccagccc
tgccccctccccgcattctcccccagaggaggcccccagcctctccctcccagccctccc
cgccgccccgactctctgctcttcaactcgagatgcagctccccgctccagctaaatctg
ctgcagcttgaggagtccccccgtgtcgaggggagtagtgctgcgcgcccccctcccagc
gaggagactgccgacccagcggccagaccggtggagataactgagtcctccaaccaggac
gcgctctcgggctccagcgacctgctggagttgctgctgcaggaggactcgcgctctggc
acgggctctgctgcctcgggctccttgggctctgggtctggctcaggctcccacgagggg
agcagcacctcagccagcatcacgcgcagcagtcagagcagccacacgagcaagtacttc
ggcagcgtcgattcttccgaggctgaggctggggctgcccgtgccagggctgagcccggg
gaccaggtcattaagtacgtgctccaggatcccatctggctgctcatggccaatgctgac
cagcatgtcatgatgacctatcaggtgccctccagggacatggcctctgtgctgaagcag
gaccgggagcggctccgggctatgcagaagcagcagcctcggttctcagaggaccagcgg
agggaactgggtgctgtgcactcctgggtccggaagggtcaactgcctcgggcccttgat
gtgatggcctgtgtggattgcggtagcagcacccaagaccctggccaccctgatgaccca
ctcttctcggaaatggatggactggggctggagcccatggaggagggtggaggcgaggcg
ggtggcggtggtggtgagggcgagggcggtgatgaggcccaggcccaagctggggccacg
gtctcaagctctcaggacctggccatggaggaggagggacaaggtgggagctcatccagt
ccagccttacctgccgcagaaaatggcaccagctag

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