KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112402073
Entry
112402073         CDS       T08872                                 
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
  KO
K08331  autophagy-related protein 13
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04136  Autophagy - other
nasi04140  Autophagy - animal
nasi04211  Longevity regulating pathway
nasi05010  Alzheimer disease
nasi05014  Amyotrophic lateral sclerosis
nasi05016  Huntington disease
nasi05017  Spinocerebellar ataxia
nasi05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112402073 (ATG13)
   04136 Autophagy - other
    112402073 (ATG13)
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    112402073 (ATG13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    112402073 (ATG13)
   05014 Amyotrophic lateral sclerosis
    112402073 (ATG13)
   05016 Huntington disease
    112402073 (ATG13)
   05017 Spinocerebellar ataxia
    112402073 (ATG13)
   05022 Pathways of neurodegeneration - multiple diseases
    112402073 (ATG13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nasi04131]
    112402073 (ATG13)
   03029 Mitochondrial biogenesis [BR:nasi03029]
    112402073 (ATG13)
Membrane trafficking [BR:nasi04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    112402073 (ATG13)
   Atg1 complex
    112402073 (ATG13)
Mitochondrial biogenesis [BR:nasi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    112402073 (ATG13)
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 112402073
NCBI-ProteinID: XP_024604380
UniProt: A0A341BNM8
LinkDB
Position
Unknown
AA seq 439 aa
MCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNRLSLLLKSLLAITRVTPAYR
LSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPVGTITLSCAYRINLAFMSTR
HFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGVTYPSVEDSQEVCTTSFSTS
PPSQLSSSRLSCQPAALGVGSADLGCPAVFAAGLNTTHPYQLMVPGKEGGVPLAPNQPAH
GAQAGDQERLTTCTPSDGAHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFV
NKPINQVTLTSLDIPFAMFAAKNLELEDVDPMVNPPDSPETTSPLQGSLHSDGSSGGSSG
NTQDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEK
LAVHEKNVREFDAFVETLQ
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgtgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctgg
tgtctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgccgtgtacaac
agactgtcgttgctactgaagtctctccttgctataactagggtgacaccagcttacaga
ctgtccaggaaacaagggcatgaatatgtcatattgtatagaatatattttggggaagtt
cagctgaatggcttaggagaaggtttccagacagttcgtgttgggacagtgggtacccct
gtgggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccagg
cactttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccc
tatcccagctcctcgcccatgcatccctgcaattacagaaccgctggtgaggacactgga
gtaacatatccttctgtggaagattctcaagaagtgtgcaccacctctttttccacctcc
cctccatcccagctctcaagctctcgcctttcctgtcagcctgctgccctgggcgttgga
tcagctgacctgggttgtccagccgtgtttgctgccggcttaaacaccacacacccttac
cagctaatggttcccgggaaggaaggtggggtaccccttgctcccaaccagcctgcccac
ggtgcccaggctggtgaccaggagagactgacaacctgcaccccttctgatggggcccac
tgtgctgccacaccttccagcagtgaggatactgaaactgtgtcaaacagcagtgaggga
cgggcctccccccatgatgtcttggagaccatctttgtccggaaagtgggggcttttgtc
aacaaacccatcaaccaggtgaccctgaccagtttggacataccctttgccatgtttgct
gccaagaatttggaactggaggatgtggatcccatggtgaatcctccagattccccagag
actacatctcctcttcagggcagcctgcactctgatggctccagtgggggcagcagtggc
aatacccaggatgactttgtcatgatcgacttcaaaccagctttttctaaagacgacatt
cttccgatggacttggggaccttctatcgtgaatttcagaacccccctcagctgagcagc
ctctccatagatatcggggcacagtccatggctgaggacttggactcactaccagagaag
ctggctgtgcacgagaagaatgtccgagaatttgatgcctttgtagaaaccctgcagtaa

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