Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112402095
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Entry
112402095 CDS
T08872
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04151
PI3K-Akt signaling pathway
nasi04382
Cornified envelope formation
nasi04510
Focal adhesion
nasi04512
ECM-receptor interaction
nasi04820
Cytoskeleton in muscle cells
nasi04926
Relaxin signaling pathway
nasi04933
AGE-RAGE signaling pathway in diabetic complications
nasi04974
Protein digestion and absorption
nasi05146
Amoebiasis
nasi05165
Human papillomavirus infection
nasi05200
Pathways in cancer
nasi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112402095 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112402095 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112402095 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112402095 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
112402095 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
112402095 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
112402095 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112402095 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
112402095 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
112402095 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
112402095 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112402095 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nasi04147
]
112402095 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
nasi00536
]
112402095 (COL4A6)
Exosome [BR:
nasi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112402095 (COL4A6)
Glycosaminoglycan binding proteins [BR:
nasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112402095 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112402095
NCBI-ProteinID:
XP_024604475
UniProt:
A0A341BNX6
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCIGGCKCSPEKGARGRPGPIGIQGP
VGPQGFPGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGEPILAQGSFKGMKGEPGLPGLD
GITGPQGAPGSPGAVGPIGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLQGFPGISGPPGLPGFGIAGEKGEKGIPGLPGPRG
PTGLEGVQGPPGSQGKKGSSGFPGLNGFPGIKGEKGDIGLPGPDVFIDTDGAVISGYPGD
TGMPGLPGLKGDEGIQGLPGPPGAPGLPASPGGPGTLGLQGVPGLKGDQGNPGHTTIGAA
GLPGRDGLPGLPGLPGLPGPAFETGTLQSTEPGLPGLRGERGPKGNPGLKGIKGDSGFCA
CDGGVPNIGPPGEPGLPGPPGLLGLPGLKGARGDPGFGGAQGPSGDPGVFGPRGLEGPKG
KKGEATLSTGSGMPGDQGDPGLQGLPGETGAPGKDGVPGLPGLPGFQGDGGQGFPGEKGL
PGLPGEKGHAGPTGPPGIGLPGSSGPRGLPGDKGVDGFPGQPGPPGIPGITLPCIIPGPY
GPSGFPGAPGFPGPNGARGLPGTPGQPGLHGNKGEPGSPGLVHLPEMPGFPGPHGEKGLP
GFPGLPGKDGLPGKVGSPGLPGPKGAPGDIIGAENGAPGKQGLQGLPGDRGFPGDSGLTG
PKGLLGKSGLLGPKGDRGSPGIPGRAGQPGPRGSDGLFGIKGKPGLPGAPGFPGTSGHPG
KKGPRGDIGPPASAGKRGLPGLKGLPGSPGLIGFLGNSGLPGATGLPGLPGLKGEKGSVG
LIGFPGIPGLPGIPGASGLKGIPGSMGRVGPSGQAGSPGEKGDRGDPGPVGVPSPRLPVL
NLHFTGDKGSQGSPGSIGFPGPRGDKGEAGSPGPPGLPGAPGFPSLIKGLSGRPGSPGST
GLRGLPGLKGSPGITGFPGIPGESGSQGLSGAPGLPGASGLPGLKGDQGQTLGISGSPGP
KGQPGEPGFKGVKGKDGPVGDVGFPGNKGEDGKVGISGDVGLPASPGLPGVAGMRGNPGL
PGSSGHPGAAGPLGPPGLIGTKGFPGLSGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLP
GPKGEKGSLGIGIGVPGKPGVRGPKGSRGFPGLQGPAGLPGAPGLSLPSVIAGQPGDPGR
PGLDGEQGRPGPPGLPGSPGPSSDQGDPGDPGFPGIPGPQGPKGDQGIPGFSGLPGELGL
KGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGAPGQTPIAEAIEAPPGPMG
LTGIDGIPGLMGDPGAQGPGGLQGFKGLPGIPGKDGPNGLPGPPGALGDPGLPGLQGPPG
FEGAPGKPGPFGRAGMPGQSVRVGYTLVKHSQSEQVPLCPVGMSQLWVGYSLLFVEGQEK
AHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQIPP
YISRCSVCEAPSQAIAVHSQDITIPQCPMGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGS
CLEEFRATPFIECSGARGTCHYFANKYSFWLTTVEEREQFGEEPVSETLKAGQLHTRVSR
CQVCMKSV
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggcttctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatggaaagccatgtggaggccaagactgcattgggggctgt
aaatgctctcctgagaaaggagcccgagggcgaccaggaccaattggaattcaaggtcca
gtgggtcctcaaggatttcctggccctagtggtttatcagggttgaaaggagagaggggc
tccccaggacctctgggaccgtatggaccaaaaggagataagggtcccatgggagttcct
ggctttcttggcatcaatgggattccgggccaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tatcccgggcttctcggaccacccgggcttcctggtcagaaaggctctaaaggtgaacct
atccttgcccaaggtagtttcaaaggaatgaagggggagcctgggctgcccggactggat
ggaatcactggcccacaaggagcacccggatctccaggagctgtgggacccataggacca
ccaggattgcaaggtcctccaggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggggatgttggcctgcctggccctgcagga
cccccaccatctactggggaactggaattcatgggattccccaaagggaagaaaggatcc
aagggtgaaccagggcttcagggcttcccaggaataagtggtcctccaggtctcccgggt
tttggaattgctggagaaaaaggagaaaagggaatccctggtttgccgggacctaggggt
cccacgggtttagaaggagtccaaggccctccagggagtcagggcaagaaggggtcttca
ggtttccccgggcttaatggattcccaggaattaagggtgaaaagggtgacattggcctg
ccaggcccagatgttttcatcgatacagatggtgctgtgatctcaggttatcctggagac
accggtatgccaggcctcccaggccttaaaggagatgaaggcatccagggcctgcctggc
cctcctggtgcccctggattaccagcttcaccaggtggccccggtactctagggctccag
ggagttccaggcctgaagggggaccaaggaaaccccggccacaccacaattggggcagct
ggcctccctggcagagatggtttgccaggcctaccaggcctaccaggcctacctggtcca
gcatttgagacgggaactctacagagcacagagccagggttgcctggtctccgaggagaa
cgaggtccaaaaggaaacccaggcctcaaaggaatcaaaggggactctggtttttgtgct
tgtgatggtggtgtcccaaacattggaccacctggggagccaggcctacctgggccacca
ggtctcctgggccttccgggcctgaaaggagcgagaggagatccaggctttgggggtgca
cagggcccatcaggagatccaggtgtatttgggcctcgaggtctggaaggccccaaagga
aagaaaggggaagcgactctcagtacaggatcagggatgccaggagatcagggtgatcct
ggtctccaggggctccctggtgagacaggagccccaggcaaggacggagtaccaggttta
ccaggcctgccaggctttcagggtgatggtggacagggcttcccaggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccacgcaggtccaactggccccccaggaattgggcta
ccaggatcttctggacctcgtgggcttcctggagataaaggagtagatggattcccaggg
caaccaggcccccctgggattccaggtatcaccttgccttgtattattcctgggccatac
ggtccatcaggattcccaggagctcccggattcccaggccctaacggggcccgtggcctc
cctgggactccaggccagcctggattgcatggaaataaaggggagcccggaagtccagga
ttggttcacctccctgaaatgccaggatttcctggacctcatggagagaagggcttgcct
gggtttcctgggctccctggaaaagatggcttgcctgggaaagttggcagtcccggctta
ccaggtcccaagggagcccctggtgacatcattggtgctgaaaatggtgctcctgggaag
caaggcctacagggactgccaggagacagaggatttcctggagactctggccttacagga
cccaagggtttgcttgggaagtcgggcttgctgggccccaaaggtgatcggggcagccct
ggaataccaggccgcgcaggacagccaggcccccggggatctgatggtctattcggcatc
aagggcaaacccgggctcccaggagcaccaggctttccaggcacttcaggacatcctgga
aagaaaggtccaagaggcgatataggtccccctgcatcagctggaaagagaggcctgcct
gggctgaaaggccttccgggatctccagggctaattggcttcctggggaactccggcttg
ccaggggccactggactgccaggcctgccaggtctgaagggtgagaaggggtctgttgga
ctgataggttttccagggattccaggtctccctggtattcctggtgcaagtggattaaag
ggaattcctgggtcgatgggaagagttggaccatctggacaggctggtagccctggtgaa
aaaggagacagaggcgacccggggccagtcggagtacccagccccagacttccagtgctg
aacctgcacttcacaggagacaaaggctctcagggctcacctggatccatcggatttcct
gggcccagaggtgacaaaggagaggctggcagccctgggccaccaggcttgcctggagct
cctggcttccccagcctcatcaagggacttagtgggagaccaggctcccctggctccaca
ggactacggggcttacccggcctgaaggggtcccctggaatcacaggtttcccaggaata
ccaggagaaagtggttcacagggtctcagtggagctcctgggctcccaggagcatctggt
ctcccaggtttaaaaggagatcaaggccagacacttggaatttctggtagcccaggaccc
aagggacaacctggggagcctggtttcaaaggtgtgaaaggaaaagatggaccagttggt
gatgtgggtttcccaggaaacaaaggtgaagatgggaaagttggtatttctggagatgtt
ggccttcctgcctccccaggactccccggggttgcaggcatgagaggaaatccagggctt
ccaggttcttcaggccacccaggggcagctgggcccctgggaccccctggcctaatagga
accaaaggtttccctggactttctggtttacatggactgaatgggctgccaggaaccaag
ggaacccatggaactccaggacctagtataaccggtgtgcctgggccagctggcctgcct
ggtcccaaaggagaaaaaggttctctaggaattggcattggagtcccaggaaagccaggc
gtgagaggaccaaaaggtagcaggggtttcccaggtctccagggccccgctggtctccct
ggtgccccaggtctctccttgccctcagtcatagcaggacaacctggtgaccccgggcga
ccaggcctagatggagaacaaggtcgcccaggccccccggggctcccaggatcccctggg
ccatcctcggatcaaggcgacccgggagaccctggcttccctggaattcctggccctcaa
gggcccaagggagaccaaggaattccaggtttctctggcctccctggagagctaggactg
aaaggcatgagaggtgagcctggcttcatggggactccaggcaaagttgggccacctgga
gacccaggacttccggggatgaaggggaaggcagggccaagaggcttatccggcccccga
ggcgctcctggacaaacaccaattgcagaagccatcgaggctcctcctggacccatgggt
ctaacaggcatcgatggcatccctggcctcatgggggaccctggggcccaaggccctgga
ggcctacaaggcttcaaaggtttacctggcatccccggcaaagacggccccaatggactc
cctggcccacctggggctcttggtgatcctggtctccctggactgcaaggccctccagga
tttgaaggagctccagggaagccggggcccttcgggagggctggaatgcctgggcagagc
gtgagggtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgcccc
gtcgggatgagccagctgtgggtcggttatagcctgctgttcgtggaggggcaggagaaa
gcccacaaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccc
ttcatctactgcaacatcaacgaagtgtgccactatgcccggcgcaacgataaatcctac
tggctctccaccaccgcgcccatccccatgatgcccgtcggccagacgcagattcccccg
tacatcagccgctgctctgtgtgtgaggcgccctcacaagccatcgctgtgcacagccag
gacatcaccatcccgcagtgccccatgggctggcgcagcctctggattgggtactccttc
ctcatgcacacggccgccggcgctgagggcgggggccagtccctggtctcccctggctcc
tgcctagaggagttccgagccactcctttcatcgagtgcagtggtgcccggggcacctgc
cactactttgccaacaagtacagtttctggctgacgacggtggaagagagggagcagttt
ggggaggagcctgtatctgagacgctgaaagccgggcagctccacacccgggtcagccgc
tgccaggtgtgtatgaaaagcgtgtag
DBGET
integrated database retrieval system
