Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112402167
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Entry
112402167 CDS
T08872
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04120
Ubiquitin mediated proteolysis
nasi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112402167 (SYVN1)
04120 Ubiquitin mediated proteolysis
112402167 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112402167 (SYVN1)
Enzymes [BR:
nasi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112402167 (SYVN1)
Ubiquitin system [BR:
nasi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112402167 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112402167
NCBI-ProteinID:
XP_024604625
UniProt:
A0A341BPD0
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPAPEDRAPTPSPLPA
IWLYLSLDLFSPPRPLSAVAQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGDAVAPPSTS
AALSRPSGAATTTAGSAASAPAPGSASTPDAGPAPGFPFPPPWMGMPLPPPFAFPPMPVP
PAGFAGLTPEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPA
TSANPTEETAPTAVTAAFSTSTPSSEATTPSLGASPPAPEPEKPSAPESAGTEELPEDGE
PDAAELRRRRLQKLESPVAH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgccgtgatgatggcggccagcctggcgctgaccggggccgtggtggct
cacgcctactacctcaagcaccagttctaccccaccgtggtgtacttgaccaagtcaagc
cccagcatggcagtcctgtacatccaggccttcgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttcttcggacagctgagggcggcagagatggagcatcttctggaacgt
tcctggtacgctgtcactgagacttgtctggccttcactgtttttcgggatgactttagc
ccccgctttgtggcactcttcactctccttctcttcctcaagtgctttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
attgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgactatggtgctcaccatcttcatcaagtacgtgctgcactctgtggacctccag
agcgagaatccctgggacaataaggccgtgtacatgctctacacggagctgtttacaggc
tttatcaaggttctgctgtacatggctttcatgaccatcatgatcaaggtgcacactttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagctatccgcaacatgaacacactgtatccagacgccacc
ccagaggaactccaggcgatggacaacgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgtatggatgtccttcgggcgtcgctgccgacc
cagtcaccaccgccccctgccccagaggacagagccccaacacccagtcccttgcctgcg
atttggctctatctcagtttggaccttttctcaccaccccgtcctctctctgcagtcgcc
cagggcctcctgcctcccttccctccaggcatgttcccgctgtggccccccatgggcccc
tttcctcctgtcccacctccccccagctctggagacgctgtggcccctccgtccaccagt
gcagccctttctcggcccagtggagcagccacaaccacagctggttctgctgcctctgcc
ccagcacctggctcggcctccacccctgacgctggccctgccccaggcttccccttccct
cccccgtggatgggcatgccactgcctccaccctttgccttccccccgatgcctgtgcct
cctgccggctttgctgggctgaccccagaggagctgcgggctctggaaggccacgagcgg
cagcacctggaggcccggctacagagcctgcgcaacatccacacgctgctggatgccgcc
atgctgcagatcaaccagtacctcaccgtgctcgcctccctcgggcccccccggcctgcc
acctcagccaaccccactgaggagactgcccctacagctgtcactgctgccttctccacc
agcacccccagctctgaggccaccaccccatccctgggagcctccccgccagcccctgaa
cctgaaaagccttcagctcctgagtcagcgggcaccgaggagctgcctgaggatggggag
cctgacgcagcagagctccgccgccgtcgcctgcagaagttggagtcccctgttgcccac
tga
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