Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112402787
Help
Entry
112402787 CDS
T08872
Symbol
EXOSC10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112402787 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112402787 (EXOSC10)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
112402787 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
112402787
NCBI-ProteinID:
XP_024605721
UniProt:
A0A341BSM3
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MALPSPRESKAQSATSDTKSDGEMVLPGFPDADSFVKFALGAVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDQNKVTELEDKFDLLVDANDVI
LERVGILLDEASGVNKNQQPVLPAGLQVPKTIVSSWNRKAGEYSKKTKCETFRLLHAKNI
IRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRERPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPEPQLYRPVGETPCHFVSSLDELVEL
NEKLLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVESNKQYQ
LADWRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPTQLQVEWQRSRDICLKK
FIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVAAGVRKDGPPPNPE
RLENALFGPHDCSHAPSDGCPLIATNGPVPVQKQEGLPTAREEEEALPDSGCLIATAVIT
LFNEPSAEENGKGPLTVAQKKAQNIMESFENPFRMFLPSLESRAHVSQTAKFDPSSKIYE
ISNRWKLASQVQVQTESKGTAKKKAAEHTAARDQAKEECRAAAEQAVSVRQQAALENAAK
KRERTTSDPGTTEQKQDKKRLKISKKLKDPDPPEKDFTPYDYSKSDFKAFAGDSKSTPSS
QFDPNKQPPSGKKCTAAKKIKQSMGNKSMSFPTGKSDRYVPGGRCGPGNPVSISEALGGK
TFRGSLPTRSRPLSFGRLAGKGEVIAGCQSQPRPPRAPVTLSTLPVPYGFPGAPQSK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcccagtccccgagagtctaaggcccagtcggcgacaagcgataccaagtct
gacggggagatggtgctgcccggcttccccgatgcagacagcttcgtgaagtttgctctt
ggggcagtggtggcagtcaccaaggcatctgggggcctaccacagtttggtgatgagtat
gatttttaccgaagttttcctggcttccaggcattttgtgaaacacagggagacaggttg
cttcagtgcatgagtagggtaatgcagtaccatggatgtcgcagcaacattaaggatcag
aataaagtgactgagctggaggacaagtttgatttgctagttgatgccaatgatgttatt
ctggaaagagtgggcattttactggatgaagcatcaggtgtgaataagaatcaacaacct
gtcctccctgcaggattgcaggtccctaaaaccatagtgtccagctggaaccggaaggca
ggagaatatagcaaaaaaacaaaatgtgaaacattccggctgcttcatgcaaaaaacatc
atccggcctcagcttaaattccgagagaagattgacaattccaacacgccatttcttcct
aaaatcttcatcaagcccaatgctcagaaacccctccctcaggcactctctaaagaaagg
cgggagcgcccacaggaccgaccagaggacttggatgtcccccctgccctggcagatttc
atccaccagcagagaacccagcaggtggagcaggacatgtttgcacatccttatcagtac
gaactagatcacttcactccaccagactcagtccttcaaaagccagagcctcagttatac
agacctgtaggagagacaccctgccacttcgtgtcctcgctggatgaactagtggaactc
aatgaaaagctcctgaagtgtcaagaatttgctgtagacttggagcaccactcttaccgg
agcttcctagggctcacctgcctgatgcagatttccacccggacagaagacttcatcgtt
gacaccctggagcttcgcagtgacatgtacattctcaatgagagcctcacagacccggct
attgttaaggtcttccacggtgccgattcagacatagaatggctacagaaggactttggg
ttgtacgtggtgaacatgtttgatacccatcaggcagcacgccttcttaacctgggcagg
cactccctcgaccatctgctgaagctctactgcaacgtggaatcaaacaagcagtatcag
ctggccgattggagaatacgacctctgcctgaggaaatgctcaactatgcccgagacgac
actcattacttgctttacatctatgataagatgaggctggagctgtgggagcgtggcaac
gagcagcccacgcagctgcaggtggagtggcagcggagccgtgacatctgcctcaagaaa
ttcatcaaacctatcttcacggatgaatcttacctggaactgtatagaaagcaaaagaaa
catctcaacacacagcaactaacggcctttcagctgctgtttgcctggagggataaaaca
gctcgcagggaagatgaaagttatggatatgtcctgccaaaccatatgatgctaaagata
gctgaggaactgcccaaggaacctcagggcatcatagcctgctgtaaccctgtgccacct
cttgtacggcagcagatcaatgaaatgcatcttttaattcagcaggcgcgagagatgccc
ctgctcaagtctgaagttgcagctggagtgaggaaggacgggccaccgcccaaccctgag
agattggagaatgctctcttcggcccccacgactgctcccacgccccgtcagacggctgt
cctctcattgcaaccaatgggcctgtgccggtgcagaagcaggagggcctccccactgcc
cgagaagaagaggaggccctgccggactctggatgccttatcgctaccgctgtcatcacg
ttatttaacgaacctagtgctgaggaaaatggaaagggtccattaacagttgcacagaaa
aaagcccagaacataatggagtcctttgaaaatccatttcggatgtttctgccttcacta
gaatcccgggctcacgtttctcagacagcaaagttcgatccatcttcgaaaatctatgaa
atcagcaaccgttggaagctggcaagccaggtacaggtacaaacagaatctaaaggaacc
gccaagaagaaggcggctgagcacacagctgcccgggaccaggccaaggaggagtgcaga
gcagcagcggagcaggctgtgtccgtccgccagcaggctgccctagagaacgctgccaag
aagagggaacgaacaacaagtgacccagggacgacagaacagaaacaagacaagaaacga
ctcaaaatttccaagaagctaaaagacccagatccaccagaaaaagattttaccccatat
gactacagcaagtcggatttcaaggcttttgctggagacagcaaatccacaccttcttcc
cagtttgacccaaataagcagccaccgtctggcaagaaatgcactgcagccaaaaaaatt
aaacaatcgatgggaaacaaaagcatgtcttttccaactggaaagtcagacaggtacgtg
ccaggtggccggtgtggcccgggaaacccggtgagcatctccgaggccttaggtggaaag
actttcagagggtctctcccaacccgatcccgccctttgtcatttggaagactagctggg
aaaggagaggtgatcgctggatgccagtcacagccacggcctccccgggctccagtcacc
ctcagcactctcccggtaccatacggtttcccaggggcacctcagagcaaatag
DBGET
integrated database retrieval system
