KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112403274
Entry
112403274         CDS       T08872                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04140  Autophagy - animal
nasi04142  Lysosome biogenesis
nasi04148  Efferocytosis
nasi05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    112403274 (VPS41)
   04140 Autophagy - animal
    112403274 (VPS41)
   04148 Efferocytosis
    112403274 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112403274 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nasi04131]
    112403274 (VPS41)
Membrane trafficking [BR:nasi04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    112403274 (VPS41)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 VPS18_solenoid_2nd Clathrin zf_RING_Vps8_fungal WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_HPS5 Vps39_1 zf_RING_Vps8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st TPR_YpiA Frtz zf-RING_5 CFAP251_N Beta-prop_ACSF4 RIG-I_C Beta-prop_IFT140_2nd zf-rbx1 CofB_pilin_dom zf-RING_11 zf-RING_2
Other DBs
NCBI-GeneID: 112403274
NCBI-ProteinID: XP_024606425
UniProt: A0A341BUM3
LinkDB
Position
Unknown
AA seq 854 aa
MAEAEEQENGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDISPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDSVTLIIGWGPSIKI
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVEKGEYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIDFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGILVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMTSMSSPVQFCNICSA
KHRGPGSAILEMKK
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggcggaagcggaggagcaggaaaacgggtctcttgaagaatctacagatgagtctgag
gaagaagagagtgaagaggagcccaaactgaagtatgaaaggctctccaatggggtaact
gaaatccttcagaaggatgccgctagctgcatgacagtccacgacaagttcttggcactg
ggcacacattatggcaaggtttatttactggatgtccaggggaacatcactcagaagttt
gatataagtcctgtgaagataaatcagattagcctggatgaaagtggcgaacacatgggc
gtgtgttcagaggatggcaaggtgcaggtgtttggactatattctggagaagaatttcat
gagacttttgactgtcccattaaaatcatcgccgtgcatccgcatttcgtgagatccagc
tgcaagcagtttgtgaccggagggaagaagttgctgctgtttgaacggtcttggatgagc
agatggaagtcttcagttctgcacgaaggagaagggaacatacggagtgtgaagtggagg
ggccatctgattgcctgggccaataatatgggtgtgaagatttttgacatcacctcaaag
caaagaatcaccaatgtgccccgggatgatataagccttcgccctgatatgtatccctgt
agcctctgctggaaggacagtgtgacactgatcattggctggggcccctctatcaagata
tgctcggtgaaggaacggcatgccagtgaaatgagggacttgccgagccgatacgttgaa
atagtgtctcagtttgaaactgaattctacatcagtggactggcacctctctgtgatcag
cttgttgtactttcctatgtaaaggaggtttccgaaaaaacggaaagggaatactgcgcc
aggcccagactggatatcatccagccactttccgagacttgtgaagagatctcttctgat
gctctgactgtgagaggctttcaggaaaatgaatgtagagattatcacttagaatactcg
gaaggggagtcactcttctacattgtgagtccaagagatgttgtcgtagccaaggaacga
gaccaggatgaccacatcgactggctccttgaaaagaagaaatatgaagaagctctgatg
gcagctgaaattagccaaaagaacattaaaagacataagattctggacatcggcttggca
tatataaaccacctggtggagaaaggagagtacgacatagcggcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtatataaatttaaagaaattgga
cagcttaaggctattagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttgcatgaatttttggaaagtgattatgagggttttgccacactgatc
cgagaatggccgggagatctgtacaacaattcagtaatagttcaagcagttcgggatcat
ctgaagaaagacagtcagaacagaaccttacttaaaaccctggcagaattgtacacctat
gacaaaaactatggcaatgctctggaaatatacttaacgttaagacataaggatgttttc
cagttgatccacaagcataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattctgagaaagctgttgacatgcttctggacaacgaagataaaatttcaatt
aaaaaggtagtggaagaattagaagacagaccagagctgcagcacgtgtatctgcataag
cttttcaaaagagaccatcataaggggcagcgctaccacgagaagcagatcagcctttac
gcagaattcgaccgacccaacttgcttccatttctccgagacagtatccactgccccctt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttctg
agccgaatgggtaacagccgaagtgccctgaagatgatcatggaggaattacatgacgtt
gataaagcgattgactttgccaaggaacaggatgacggggaactctgggaagatctgatt
ttatattccatcgacaaaccaccctttatcaccggcttgctaaacaacatcggcacgcac
gttgacccaattctactgattcaccgtattaaggaaggaatggagattcctaatttgaga
gactccttggttaaaattctgcaagactacaatctgcaaattctgcttcgcgaaggctgc
aagaagattctcgtagctgactctttgtccttactaaagaagatgcaccgaactcaaatg
aaaggcattctggttgatgaggagaacatctgtgagtcctgtctttcccctattctccca
tcagacgcagctaagcccttcagcgtggtggtcttccactgccgccatatgttccacaag
gagtgcctgcctatgaccagcatgagctctcctgtgcagttctgtaacatctgcagtgcg
aagcaccggggaccaggaagtgccattctggagatgaagaaatag

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