Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112403492
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Entry
112403492 CDS
T08872
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03013
Nucleocytoplasmic transport
nasi05014
Amyotrophic lateral sclerosis
nasi05200
Pathways in cancer
nasi05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112403492 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112403492 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
112403492 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112403492 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112403492 (TPR)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112403492 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
112403492
NCBI-ProteinID:
XP_024606752
UniProt:
A0A341BYK1
LinkDB
All DBs
Position
Unknown
AA seq
2438 aa
AA seq
DB search
MPSSGPVSKSRQRGRPMASRSCDRSRRLSLRRAGARETPSEVAEAAAQASGSSSSSPFFS
VSAPSAAAATVPGPIDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKVLTEKNKELEVAQD
RSIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLSEKLKESNATKGELQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGRDKGNEILELKC
NLENKKEEVSRMEEQMNGLKTSNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLE
KIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLE
SALAELEQLRESRRHQMQLVDSIVRQRDMYRILLSQTTGVTIPLQASSLDDSSLVSTQKR
SSTSQTVATPTPVPVIESAEAIEAKAALKQLQEIFENYKKEKADNEKMQNEQLEKLQEQV
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTAATQKQEQIINTMT
QDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTET
NLHLNTKELLKNAQKEIATLKQHLSNVEVQLASQSSQRTGKGQPNIKEDMDDLLSQLRQA
EEQVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVHKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLNSVQNEVQEALQRAGTALSNEQQA
RRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMVSVRQHLEETTQKAESQL
LECKASWEERERMLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVASMKEGVQGPLNV
SLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVEGLRYRQRVELLERELQELQDSLNA
EREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVH
AKRIQQLTEETGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKESIQKDLDAKIIDI
QEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLN
QAETKSKSLESQVENLQKTLSEKEMEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKS
QYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTAPTSGERGIASTSDP
PTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHP
QIEPTNQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASD
QISDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDY
EEDEEEDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGG
ESNQRAADSQNSGEGNTGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRL
TIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHR
TDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEE
SGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDE
VFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRR
VRLQTTLRQGVRGRQFNRQRGMSHAMGGRGGINRGNIN
NT seq
7317 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagcggcccagtgtctaaaagccgccaaagaggacgacccatggcatcccgg
agctgtgacaggtcccgccgcttgagtctccgtcgggcgggcgcgcgcgagacaccgagc
gaggtggcagaggcggcagcccaggcttctgggtcctcttcgtcttcgcctttcttctcc
gtttctgctccgtcggccgctgccgccacggtccccggcccgatcgacatggcggcggtg
ttgcagcaagtcctggagcgcacggaactgaacaagctgcccaagtcggtccagaacaaa
cttgagaagttccttgctgaccagcagtccgagatcgatggcctcaaggggcggcacgag
aaatttaaggtggagagcgaacaacagtactttgagatagagaagaggctgtcccacagt
caggagagacttgtgaatgaaacccgagagtgccaaagcttgcggcttgagctggagaag
ctcaacagtcaactgaaggtgctaactgagaaaaacaaagaacttgaagtggctcaggat
cgcagtattgccattcagagccagtttacaaggacaaaggaagaattagaagctgagaaa
agagacttaattagaaccaatgagagactatctcaagaacttgaatatttaacagaggat
gttaaacgtctaagtgaaaaacttaaagaaagcaatgcaacaaagggtgagcttcagtta
aaattggatgaacttcaagcttctgatgtttctgttaagtatcgagaaaaacgcttggag
caagaaaaggagttgttacataatcagaatacttggctgaatacagagttgaagaccaaa
actgatgaacttctggctcttggaagagataaaggaaatgaaattcttgagcttaaatgt
aatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatgaatggcttgaaa
acatcaaatgagaatcttcaaaagcatgtagaggatctgttgaccaaactgaaagaggcc
aaggaacagcaggccagtatggaagagaaattccacaatgaattaaatgctcacataaag
ctctctaatctttacaagagtgctgctgatgattcagaggcaaagagcaatgaactgacc
cgagcagtggatgaattacacaaacttttgaaggaagctggagaagccaataaagcaata
caagatcatcttctagaagtagaggaatctaaagatcaaatggaaaaagaaatgcttgag
aaaatagggaaattagagaaggaattagagaatgcaaatgacctgctttctgccacaaaa
cgtaaaggggccatcttgtctgaagaagagcttgcagccatgtctcctactgcagcagcc
gtagctaagatagtgaaacctggcatgaagctaactgagctgtataatgcttatgtggaa
actcaggatcagctgcttttggagaaactagagaacaaaagaattaataagtatctagat
gaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccaacgtgaggagtat
gaacgtgcccagaaagctgtggcaagtttatctgttaagcttgaacaagctatgaaggag
attcagcgattgcaggaggacacagataaagccaataaacattcatctgtgcttgaaaga
gacaatcaaagaatggaagtacaaataaaagatctttcacaacagattagagtgcttcta
atggaacttgaagaagcgaggggtaaccatgtaatccgtgatgaggaagtaagctctgct
gatataagtagttcatctgaagtaatatcacagcacctagtatcttacagaaacattgaa
gagcttcaacagcaaaatcaacgtctcctggtggcccttcgggaacttggggaaaccaga
gaaagagaagaacaagaaacaacttcatccaaaataactgagcttcagctcaaacttgag
agcgccctcgctgaactggaacaactccgtgaatcacggcgacatcaaatgcagcttgtt
gattccatagttcgtcagcgtgatatgtaccgtattttgttgtcacagacaacaggagtt
accattcctttacaagcttcaagcttagatgatagttctcttgtgtcaactcaaaaacgt
tcaagtacatcacagactgttgccactcctactccagtacctgtaattgagtcagcagag
gctatagaagccaaggctgcccttaaacagttgcaggaaatttttgagaactacaaaaaa
gaaaaggcagataatgaaaaaatgcagaatgagcagcttgagaaacttcaggagcaagtc
acagatttgcgatcacaaaataccaaaatttctacccagctagattttgcttctaaacgt
tatgaaatgctacaagataatgttgaaggatatcgtcgagaaataacatccctacacgag
agaaatcagaaactcactgcagcaactcaaaagcaggaacagatcatcaacacaatgaca
caagatttgagaggagctaatgaaaagctagctgttgcagaagtaagagcagaaaatttg
aaaaaggaaaaggaaatgcttaaattgtcagaagttcgtctttctcagcaaagagaatct
ttgttggctgaacaaagagggcaaaacttgctgctaactaatctgcaaacaattcaggga
atattggaacgatctgaaacagaaaccaaacaaaggcttagtagccagatagaaaaactg
gaacatgagatatcccatctaaagaagaagttggaaaatgaggtggaacaaaggcataca
cttactagaaatctagatgttcaacttttagatacaaagagacagctggatactgagact
aatcttcatcttaacacaaaagaactgttaaaaaatgctcaaaaggaaattgctacattg
aaacagcacctcagtaatgtggaagtccagcttgcttctcagtcctcacagagaactggt
aaaggtcagcctaacatcaaagaagatatggatgaccttctgagtcagctaaggcaggca
gaagagcaggtgaatgacttgaaggaaagactcaaaacaagcactagtaatgtggaacag
tatcgtgcaatggttactagtttggaagagtccctcaacaaggaaaaacaggtgacagaa
gaagtacataagaatattgaagttcgcttaaaagagtcagctgagtttcagacacagctg
gaaaagaagttaatggaagtagagaaggaaaaacaggaacttcaggatgacaagagaaga
gccatagagagcatggaacaacagttatctgagttaaagaaaacactcaatagtgttcag
aatgaagtacaagaagctcttcagagagctggcacagctttgagtaatgagcagcaagcc
agacgggactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgagaga
gaattgatgctacatgctgctgatgttgaagctctacaagctgccaaagaacaggtttcc
aaaatggtgtcagtgcgtcagcacttggaagaaacaacccagaaagcagaatcacagttg
ttggagtgtaaagcatcttgggaggaaagagagagaatgttaaaggatgaagtttccaag
agtgtgtctcgctgtgaagatctagaaaaacaaaacagattacttcatgatcagattgaa
aaattaagtgacaaagtcgtcgcctctatgaaggaaggtgtacaaggtccattgaatgta
tctctcagtgaagaaggaaaatctcaagaacaaattttagaaattctcagatttatacga
cgagaaaaagaaattgctgaaactaggtttgaagtggctcaggttgagggtctgcgctat
cgacaaagggttgaacttttagaaagagagctgcaggaactgcaggatagtctaaatgct
gaaagggagaaagttcaggtaactgcaaaaacaatggcccagcatgaggaactgatgaag
aaaaccgaaacaatgaatgtagttatggagaccaataagatgctgagggaagaaaaggaa
aggctagaacaggatctacaacagatgcaagccaaggtgaggaaactggagttagatatt
ttacccttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttgcaagcagag
aagaagttattagaagaggatgtcaaacgttggaaagcacgtaaccagcatctagtgagt
caacagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcat
gctaagcgtattcaacaattgactgaagaaactggaagacttaaagctgaaattgcaaga
tcaaatgcatctttgactaacaaccagaacttaatccagagtctaaaggaagatttaaat
aaagtaagaactgaaaaggaaagcatccagaaggacttagatgccaaaataattgatatt
caagaaaaggttaaaactattactcaagtcaagaaaattgggcgtaggtacaagactcaa
tatgaagaacttaaagcacaacaagataaggtcatggagacctcagctcagtcttctgga
gaccatcaggaacagcatgtctcagtccaggaaatgcaggagctcaaagaaacccttaac
caagctgaaacaaagtcaaaatcactcgagagtcaggtggagaatctgcagaagacatta
tctgaaaaagagatggaagcaagaaatctccaggaacagactgtgcagcttcaatctgaa
ctttcacgacttcgtcaggaccttcaagatagaaccacacaggaggaacagctgcgacag
cagataactgagaaggaagaaaaaacaagaaaggctattgtagcagcaaaatcaaaaatt
gcacatttagctggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaagg
aatggagccttagatcagcagaaagatgaactggatgttcgtatgactgctcttaagtcc
cagtatgaaggtcgaattagtcgcttggaaagagaactcagggagcatcaagagagacac
cttgagcagagagatgagcctcaagaacctactaataaggtcccagaacagcagagacag
atcacgttgaaaacagctccaacttctggtgaaagaggaattgccagcacatcagaccct
ccaacagccaatatcaagccaactcctgttgtgtctactccaagtaaagtgacagctgca
gctatggctgggaataagtcaacacccagggctagtatccgcccgatggttacacctgca
actgttacaaatcctactactaccccaacagctacagtgatgcccactacacaagtggaa
tcacaagaagccatgcaatcagaagggcctgtggaacatgttccagttttcggaagcaca
agtggatctgttcgttctactagtcctaacgtccagccttctatccctcaacccatttta
actgttcagcaacaaacacaggctacggcttttgtgcagcccactcaacagagtcatcct
cagatcgagcctacaaatcaggagctatccccaaacatagtggaggtggttcagagttca
ccagttgagcggccttctacttccacagcagtgtttggcactgtttcagctaccccaagt
tcttctttgccgaagcgcacacgtgaagaggaagaagatagcaccatagaagcatcagac
cagatctctgacgatacagtggaaatgcctcttccaaagaagttgaaaagtgttacacct
gtaggaactgaggaagaagttatggcagaagaaagtactgatggagaggtagagactcaa
gtatacaaccaagattctcaagattccattggagaaggagtcacccagggagattataca
ccaatggaagacagtgaagaaacctctcagtctctacaaatagaccttggacctcttcaa
tcagatcagcaaacaacatcatcacaagatggtcaaggcaaaggagatgatgtcattgta
attgacagtgatgatgaagaggaggatgatgatgaaaatgatggggaacatgaggattat
gaagaagatgaagaagaagacgatgatgatgaagatgacacagggatgggagacgagggt
gaagatagtaatgaaggcactggtagtgcagatggcaacgatgggtatgaagctgatgat
gctgagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtggaggt
gaaagtaatcagagagcagctgattctcaaaacagtggtgaaggaaatactggtactgca
gagtcctctttttcccaggagatttctagagaacaacagccatcatcagcatctgaaaga
cagacccctcgagcacctcagtcaccaagacgcccaccacacccacttcccccaagactg
accattcatgctccacctcaagagttaggaccaccagttcagagaatccagatgacccgg
aggcagtctgtaggacgcgggcttcagttgactccaggaataggtggcatgcagcagcat
ttttttgatgatgaagatagaacagttccaagtaccccaactcttgttgtgccacatcgt
actgatggatttgctgaagcaattcattccccacaagttgctggtgttcctagattccgt
tttggaccacctgaagatatgccacaaacgagttctagtcactctgatcttggccaactt
gcttctcaaggaggtttgggaatgtatgaaacacccctcttcctagctcacgaagaggag
tcgggtggccgaagtgttcccactactcctctgcaagtagcagccccggtgactgtattt
actgagagtaccacctctgatgcttcagagcatgcttctcagtctgttccaatggtgaca
acatccactggcactttatccacaacaaatgaaacagcaacaggtgatgatggagatgaa
gtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctcgaaattgatagc
cagcaggaagaagagcctgttcaggcatctgatgagtcagatcttccttccaccagccag
gaccctccttccagttcttctgtagataccagcagtagtcagccaaagcctttcagacga
gtaagacttcagacaacattgagacaaggtgtccgtggtcgtcaatttaacagacagaga
ggtatgagccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
