Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112403946
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Entry
112403946 CDS
T08872
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04140
Autophagy - animal
nasi04148
Efferocytosis
nasi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112403946 (VPS11)
04148 Efferocytosis
112403946 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112403946 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nasi04131
]
112403946 (VPS11)
Membrane trafficking [BR:
nasi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112403946 (VPS11)
Hops complex
112403946 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
TPR_GEMI5
TPR_Vps41
zf-rbx1
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
DUF1993
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-RING-like
zf_RING_Vps8_fungal
DLP_helical
DUF5847
Motif
Other DBs
NCBI-GeneID:
112403946
NCBI-ProteinID:
XP_024607460
UniProt:
A0A341BXU4
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPGAAPASGPSASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGAEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGDYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQSSDKQILNIYDLCNKFIAYSTVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTELLKGLCTDYRPSLEGRGDREAPGCRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEQEPQVKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIVQYHMQHEQYRQVLAVCERHGAQEPSLW
EQALSYFARKEEDCKQYVAAVLKHIEGKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLTASLEAGLQRDLLIHARRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgtttcgttttcttcgataaggagctggtgaaggag
ccactgggcaatgatggggctgctcccggggctgcgcctgcctctggaccctctgcttcc
aagttcctttgcctccctcctggcatcactgtctgcgactcaggccgagggagcctagtc
tttggagacatggaaggccagatatggttcttgccccgctccctacagcttaccgggttc
caggcttacaaactacgggtgacacacctgtaccagttgaagcagcacaacattctggca
tctgttggtgaggatgaagaggggatcaaccccctggtaaagatctggaacctggagaag
agagatggtggcaatccactctgcactcgaatcttccctgccatcccaggggcagagccg
actgttgtatcttgtttgactgtccatgaaaatctcaactttatggccatcggtttcaca
gatggcagtgttacactgaacaaaggggacatcactcgggaccggcatagcaagacccag
attttgcacaagggcgactatcctgttaccggactggcctttcgccaagcaggaaagacc
actcacttgtttgtagtgacaactgagaatgttcagtcctacatagtttctggaaaggac
taccctcgtgtggaattggacacccacggttgtggcctgcgctgctcagccctaagcgac
ccttctcaggacctgcagttcatagtggcaggggatgaatgtgtctacttataccagcct
gatgaacgggggccctgcttcgcctttgagggccataaactcattgctcactggtttaga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc
agggactcccagagctccgacaagcagattctcaacatctatgacctgtgcaacaaattc
atagcctatagcaccgtctttgaggatgtagtggatgtgcttgctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctgtttaagaagaacctattcgagatggcgattaatctggccaagagccag
catctggacagtgacgggttggcgcagatcttcatgcagtatggggaccatctctacagc
aagggcaaccatgatggggctgtccagcagtatatccgaaccattggaaagttggagcca
tcgtatgtgatccgcaagttcctggatgcccagcgcatccacaacctgacggcttacctg
cagaccctgcaccggcagtccctggccaatgccgaccacaccaccctactgctcaactgc
tacacaaagctcaaggacagctcgaagctggaggagttcatcaagacaaagagtgagagt
gaagtccactttgatgtggagacagccatcaaggtcctccggcaggctggctactactcc
catgccctctatttggctgagaaccacgcacatcacgagtggtacttgaagatccagcta
gaggacatcaagaattatcaggaagcccttcgatacattggcaagcttccttttgagcag
gcagagagcaacatgaaacgctacggcaagatcctcatgcaccacataccagagcagacg
accgagttgctgaagggactttgtaccgactatcggcccagccttgaaggccgaggcgat
agggaggctccaggctgcagggccaactcagaggagttcatccccatctttgccaacaac
ccgcgggagctgaaagctttcctagagcacatgagtgaggtgcagcctgactccccgcag
ggcatctatgacacgctcctggagctgcgactccagaactgggctcatgagcaggagccg
caggtcaaagagaagcttcacgcagaggccatctccctactgaagagtggtcgcttctgt
gatgtctttgacaaagccctggtcctctgccagatgcacgacttccaggatggggtcctt
tacctctatgagcaggggaaactgttccagcagatcgtgcagtaccacatgcagcacgag
cagtaccggcaggtgctcgccgtgtgcgagcgccacggggcgcaggagccctccctgtgg
gaacaggcgctcagctacttcgcccgcaaggaggaggactgcaagcaatacgtggcggcc
gtgcttaagcacatcgagggcaagaacctcatgccgcctctcctagtggtgcagaccctg
gcccacaactccacggccaccctgtctgtcatccgggactacctggtccaaaaactgcag
aagcagagccagcagatcgcgcaggacgagctccgggtgcggcgctaccgagaggagacc
acccgtatccgccaggagatccaggagctgaaggcgagtccgaagattttccagaagacc
aagtgcagcatctgtaacagtgccttggagttgccctcagtccactttctctgcggccac
tccttccaccagcactgctttgagagttactcagaaagtgatgccgactgccccacctgc
ctccctgaaaaccgcaaggtcatggatatgattcgggcccaggaacagaagcgagatctc
catgaccagttccagcaccagctcaagtgctccaacgacagcttctctgtgattgctgac
tactttggccgaggtgttttcaacaaattgactctgctgaccgacccgcccacagcccga
ctgactgcgagcctggaggctgggctgcagagggacttgctcatacacgccaggaggggc
acttaa
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integrated database retrieval system
