Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404376
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Entry
112404376 CDS
T08872
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nasi04515
]
112404376
Cell adhesion molecules [BR:
nasi04515
]
Cadherins
Protocadherins
112404376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
112404376
NCBI-ProteinID:
XP_024608087
UniProt:
A0A341C2F8
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MEPGEGSPQQIRQALLFFVFLGGSLVCSETWRYSVAEEMEIGSFIGNVVKDIGLGVEDLA
ARGARVIFDDYKPYLQLDRQTGNLILNEKLDREALCDLTEPCILNFQILLENPLQFFRAE
LRVKDINDHTPTFLDKHILLKISESTTPGTSFQMDSAQDLDVGKNAVQNYTLSPNPHFHL
KLQDSGEGRKYAELLLDQPLDREKEPELRLTLTALDGGSPPRSATALVRVLVSDINDNAP
EFEKSVYEVLVPENSPLDSLVVKVSATDLDAGLNGELSYSFSHVSRDIRKTFEIHPISGE
VRLKALLDFELIKSYTINIQAIDGGSLSGKSAILVSVVDVNDNPPEIVITSLTSPIPENS
SPDMVVAVFSLRDQDSGDNGRMVCSIHDNLPFLLKPTFKNFYTLVTESPLDREKRAEYNI
TITVTDMGTALRAFEFRVGASDRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNASAPCT
ELVPRAAEAGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSER
DAAKHRLVVLVKDNGEPPLSASVTLHVLLVDGFSQPYLPAPEAEAVDAAPAAPLTVYLVV
ALASVSSLFVFSVLVFVAVWLCRRGGAASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYE
VCLTGGSGTSEFNFLKSVASNYQESVNDVEENSNFINGFGFN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggagaaggaagccctcagcagataaggcaagcgctgcttttctttgttttc
ctgggagggtctttggtgtgttcagagacctggcgctattctgtggcagaggaaatggag
atcggctcttttataggcaacgtggtgaaagacataggtttgggcgtggaagacctggct
gcgcggggggccagagtcatctttgatgactataaaccatacttgcaattggatcgtcag
actggcaacttgatcttaaatgagaaactggaccgggaggcgctttgcgatctcaccgag
ccatgcatattaaatttccagatattattagaaaatcctttgcaattttttcgagctgag
cttagggtcaaagacataaatgatcacactcccacgtttctagacaaacatatacttctg
aaaatctcggaaagtactactccaggaacctcattccaaatggatagcgctcaggacttg
gatgtaggaaagaatgctgttcaaaactacacattaagccccaatcctcatttccacctt
aaactgcaagacagtggggagggtagaaaatacgcagagctgttgctggaccaacctctg
gatcgagaaaaggagcctgaacttagattaacactaacagccctagatggtgggtctcca
cccaggtctgcaactgcactggtgcgtgtgttggtctcagatatcaatgacaatgcccca
gagtttgagaagtctgtatatgaggttttagtaccagaaaacagccctctggactccttg
gtcgtcaaggtgtctgctacagatttagatgcaggactaaatggagaactatcttattca
ttttcccacgtctccagagacatacggaaaacatttgaaatccatcccatttctggcgaa
gtccgtttaaaagcacttctggatttcgagttaattaagtcttatacaataaatattcag
gccattgacggtgggagcctttcaggaaaatcagcaattttagttagtgttgtagatgtg
aatgacaacccaccagaaatagtcataacatctcttaccagccccataccggaaaattcg
tcacctgacatggtagtcgctgtttttagcctacgagaccaagactctggggacaacggg
aggatggtttgctcaattcacgacaatctcccctttctcttgaagcctaccttcaaaaat
ttctacaccctggtaacagagagccctctggacagagagaaaagagccgagtacaacatc
accatcaccgtcactgacatgggaacagccctgcgggcgttcgagttccgcgtgggcgcc
tccgaccgcggctcgcccgcgctcagtagccaggcgctggtgcgcgtgctcgtggtggac
gacaacgacaacgcgcccttcgtgctgtacccgctgcagaacgcctcggcgccctgcacc
gagctggtgcccagggcggccgaggcgggctacctggtgaccaaggtggtggcggtggac
ggcgactcgggccagaacgcctggctgtcgtaccagctgctcaaggccacggagcccggc
ctgttcggcgtgtgggcgcacaacggcgaggtgcgcacggcccggctgctgagcgagcgc
gacgcggccaagcacaggctggtggtgctggtcaaggacaacggcgagccgccgctctcg
gccagcgtcacgctgcacgtgctgctggtggacggcttctcgcagccctacctgccggcc
ccggaagcggaagcggtggacgcggccccggccgcccctctcaccgtctacctggtggtg
gccttggcgtcggtgtcgtcgctcttcgtcttctcggtgctggtgttcgtcgcggtgtgg
ctgtgcaggaggggcggggcggcctcggtgggtcgctgctcggtgcccgagggccccttt
ccgggccacctggtggacgtcagcggcacggggaccctgtcccagagctaccagtacgag
gtgtgtctgacgggaggctctgggaccagcgagttcaactttctgaagtctgttgcctcc
aattaccaggagtctgtaaatgatgtagaggaaaactcaaactttataaatggttttgga
ttcaattag
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