Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404377
Help
Entry
112404377 CDS
T08872
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112404377 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nasi03041
]
112404377 (DDX46)
Enzymes [BR:
nasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112404377 (DDX46)
Spliceosome [BR:
nasi03041
]
Complex A
U2 snRNP components
U2 related factors
112404377 (DDX46)
Complex B
112404377 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
112404377
NCBI-ProteinID:
XP_024608088
UniProt:
A0A341C187
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEQFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
IVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGFAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccactatcggaagcgatcagcatcacggggacgctctggaagt
cgatctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagaaggtct
agaagcagggatagagatagaaggagagagaggtctcgtagcagggataaaagaagatct
cggtcaagagacaggaagcgtctgaggcgttccagaagtagagagagagatcgaagtcga
gagcgaagaagatctcgaagtcgagacaggagacgttcgaggagtagaagccggggccgg
agatcccgatcctccagtcctggcaataaaagcaagaaagctgagaataggtctaggtcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaaa
gaggatgaaaaagaaaaggatgccggcaactttgaccagaataagctagaagaagaaatg
agaaagcgaaaagaaagggtagagaaatggcgggaagaacaacgtaaaaaggccatggaa
aacataggggaactgaaaaaggaaattgaagagatgaaacaagggaaaaagtggagttta
gaagatgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aagtttaatatgagaagtgtgaaaggtggtgggggaaatgaaaagaagtctgggccaaca
gtcacaaaagttgtcactgttgtcacaaccaaaaaagcagtcgtagattctgataagaag
aaaggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagactgcccttacaggttatcagacaaagcagagaaagcttctagaacca
gtggatcatggaaaaattgaatatgaacaattcagaaaaaacttttatgttgaagttcca
gaactggcaaaaatgtctcaagaggaagtgaatgtatttcggttggaaatggagggcatt
attgtcaagggaaaaggttgccccaaaccaattaaatcttgggttcagtgtgggatttct
atgaagatcttaaattctctcaaaaagcatggttatgaaaagcctacgccaatccaaacc
caggcgattcctgctataatgtctggacgagatttgattggtattgccaagacaggaagc
ggaaagaccattgcctttctgttgcctatgtttagacacatcatggatcagaggtcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccttgggccttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggttacaaatctt
cgaagagtgacttatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgttcgtcctgaccgacagacagttatgttttca
gctactttccccagagctatggaggccttggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcagaagtgtggtttgctcagatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagctacttgaacttctaggccattatcaagaatcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaagatttaatg
agagcttcttacccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgattttaagaatgggacctgcaaacttcttgttgctacgtctgttgctgcc
cgaggcctagatgtgaaacatctgattcttgtagtaaattatagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaacaaaggcttcgcctat
actttcatcacagaagatcaggctcggtatgctggtgacataattaaagcccttgaattg
tcagggactgcagtgccacctgatctagagaaactttggagtgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggcaaatgagagaaagaagttacaaaaagctgctcttggt
cttcaagattcggatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtgaaggatatggctgctcctggaacatctagtgttcctgct
ccaactgcaggaaatgctgagaagttagaaattgcaaagagattggctcttagaatcaat
gctcagaagaatttggggattgagtctcaggtagatgtgatgcagcaggccaccaatgca
attcttagaggtggcaccatcctggctcccactgtctctgcaaaaaccattgcagagcaa
cttgctgaaaagatcaatgccaagcttaattatgtgcctttggagaaacaagaagaggag
agacaggatggtggacagaatgaatcttttaagagatatgaagaagaattagagatcaat
gacttcccacagactgctaggtggaaagttacctctaaggaagctcttcagagaatcagt
gaatattctgaagctgcaattacaatcagaggaacatacttcccacctggcaaagaaccc
aaggaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcag
aaagcaaaggcagaaatcaccaggcttataaaagaagaactgatccggctgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttataa
DBGET
integrated database retrieval system
