Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404417
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Entry
112404417 CDS
T08872
Symbol
PCDHB4
Name
(RefSeq) protocadherin beta-4 isoform X1
KO
K16494
protocadherin beta
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nasi04515
]
112404417 (PCDHB4)
Cell adhesion molecules [BR:
nasi04515
]
Cadherins
Protocadherins
112404417 (PCDHB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Big_9
API5
Motif
Other DBs
NCBI-GeneID:
112404417
NCBI-ProteinID:
XP_024608177
UniProt:
A0A341C2P2
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
METLERIQQNRQVITFILILFLSQAHPAPIRYSVLEETESVSFIAHLSTDLGLGIGELAA
RSAQVVCDDDKQRLLLDRQTGDLLLREKLDREDICGPVEPCVLHFQVFLETPVQFFEGEL
LIQDINDHSPVFPNREMLLKIPENSQPGTVFPLKLAQDLDVGSNGLQKYTISPNSHFHVV
TRNHSEGNKYPDLVQDKALDREEQPEFSLTLMALDGGSPPRSGTSMLRILIMDVNDNAPE
FVHTPYEVQVLENIPLDSPILTVLARDVDAGNFGTVSYGLFQASEEIKQTFSINEVTGEI
RLTKKLDFEQIKSYHVEIEATDGGGLSGKGTVAIEVVDVNDNAPEITIPSLTCSIPENAP
ETVVSIFRIRDRDSGDNGRMVCSIPGNLPFILKPTLKNFYTLVTESPLDRESRAEYNITI
TVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDEG
ANAQVTYSLLPTLDAHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPAL
SSQALVRVLVADDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPAPEAEAADAAPAAPLTVYLVVALASVSSLFVLSVLVFVAVWLCRRGGAA
SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGDHETGEFKFLKPVFPKLLVQNTE
REIKRKPQLQE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctagagagaattcaacaaaacaggcaagtgataacatttattttgatacta
ttcttatctcaggctcaccctgcgcctattcgttattctgtgctggaagaaacagagagc
gtctcctttatagcccatttgagcacggacctgggcctgggaattggggagctggccgcc
cggtcggcccaggtagtgtgtgacgatgacaagcagcgcttgctgctagatcgccagact
ggagatttgcttttgagggagaaactagaccgggaagatatatgtggccccgttgaaccc
tgtgtgctgcatttccaagtgttcctggaaactccggtgcaattttttgaaggagaacta
ttaatccaggacataaatgaccactccccagtattcccgaatagggaaatgctcctgaaa
ataccggaaaacagccagccagggactgtttttccgttgaaattagctcaggatttggat
gtgggcagcaatggtcttcaaaaatacactatcagccccaattctcattttcacgttgtc
actcgaaatcatagtgagggcaataaatatccagatttggtgcaggacaaagcactggat
cgagaggagcagcctgagttcagcttaaccctcatggcgctggatggcgggtctccacct
aggtctggcaccagcatgttacgaatcctgatcatggatgtcaatgacaatgctcctgag
tttgtgcacactccatatgaggtgcaggttctggaaaacatccccctagactccccaata
cttactgttttagctagggatgtagatgctggaaactttgggactgtttcctacggtttg
ttccaagcatcagaggaaattaaacaaactttctcaataaatgaagtcacaggagaaatc
cgactgacaaagaaattggattttgaacaaattaaatcttaccacgtggaaattgaggct
acagatggaggaggcctttccggaaaaggcactgtagccatagaggtggtagatgtgaat
gacaacgcccctgaaattaccataccttcactcacctgctccatcccagaaaatgctcct
gagactgtagtctccatcttccgaattcgagatagagactccggagacaatggaaggatg
gtttgctctattccaggtaatctgccattcattctaaaaccgactttaaagaatttctac
accctggtaacagagagccctctggacagagagagcagagccgagtacaacatcaccatc
accgtcacagatatgggaacccctaggctgaaaaccgagcacaacataaccgtgctggtg
tccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtccgtccgc
gagaacaacagccccgccctgcacatcggcagcgtccgcgccacagacagagacgagggc
gccaacgcccaggtcacctactcgctgctgccgaccctcgacgcgcacgtgcccctggcc
tccctggtgtccatcaacccggacaacggccacctgttcgccctgaggtccctggactac
gaggccctgcgggcgttcgagttccgcgtgggcgccgccgaccgcggctcgcccgcgctc
agcagccaggcgctggtgcgcgtgctcgtggcggacgacaacgacaacgcgcccttcgtg
ctgtacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccggcctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcggccaagcacaggctgctg
gtgctggtcaaggacaacggcgagccgccgctctcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccggccccggaagcggaagcggcggacgcg
gccccggccgcccctctcaccgtctacctggtggtggccttggcgtcggtgtcgtcgctc
ttcgtcttatcggtgctggtgttcgtcgcggtgtggctgtgcaggaggggcggggcggcc
tctgtgggtcgctgctcggtgcccgagggcccctttccgggccacctggtggacgtcagc
ggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgacgggagaccatgaa
actggtgagttcaaattcctgaagccagtatttcccaaactcttggttcagaacacagag
agagaaattaaaagaaagccccaactgcaggaataa
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