Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404447
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Entry
112404447 CDS
T08872
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nasi04515
]
112404447 (PCDH12)
Cell adhesion molecules [BR:
nasi04515
]
Cadherins
Protocadherins
112404447 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
112404447
NCBI-ProteinID:
XP_024608212
UniProt:
A0A341C2T2
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MMRLLPLLLGLWGPGGYLFLSGDCQEVATLTVKYQVSEEVPSGTVIGKLSQELGREERSG
RAGAAFQVLQLPQALPIQVDSKDGLLSTGRRLDREQLCRQQDPCLVSFDVLATGDLALIH
VEIQVLDINDHQPQFPKGEQELEISESASLRTRIPLDRALDPDTGPNTLHSYTLSPSEHF
ALDVIVGPDETKHAELVVVKELDREIHSFFDLVLTAYDSGNPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAAPGTLLINLTATDPDQGPNGEVEYFLSKHVPPEVLDTFSIDAK
TGQVILRQPLDYEKNPAYEVDVQARDLGPNPIPAHCKILIKVLDVNDNTPNIHITWASQP
SLVSEALPKDSFIALIMANDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNATLDR
EQWPQYTLTLLAQDQGPQPLSVKKQLSIQISDANDNAPVFEKSRYQVSTRENNLPSLHLI
TIKAHDADLGVNGKISYHIQDSPVSHLVAIDSDTGEVTAQRSLDYEQMAGFEFLVIAEDR
GQPQLASSVSVWVSLLDANDNVPEVIHPILSDGKASLSVLVNASTGHLLVPIETPNGVGP
AGTDMPPQATPSSRPFLLVTIVARDADSGANGELLYSIQSGNEAGLFVLSPHLGQLFINI
TNASSLTGSEWELEIVVEDRGSPSLQTRALLRVFFVTSVDHLRDSAREPGALSTSVLTVI
CLVVLLAISGLILALIMSICRTEKKDNRAYNCREAESTYRHQPKRPQKHIQKADIHLVPV
LRGQVDEPGEAGQPPKHVGKEAMMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGTLAESRE
VLQDTVNLLFNHPRQRNASRENLNLPEPQPATGQPRSRPLKVAGSPTGRVPGDQGSKEAP
LSPPASSATLRRQRNLHGKVAPEKESGPRQILRSLVRLSVAAFAERNPVEELTVDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPGGSRSAIPDTDGPGARAGGQAEPDQEEGPLD
PEEDLSVKQLLEEELSNLLDPYTGLALDRLSVPDPAWMARLSLPLATNYRDNVFSPDAAT
SEEPRTFQTFGKAPGPELSPTGTRLASTFLSEMSSLLEMLLEQRPAVPVEAASEVLRRLS
VCGRTLSLDLATSGASGSEGPGGRSGKKGAEGRTSSGSSSRDLWIQEPGAPGDVRKPRP
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacttctgccacttctgctgggactttgggggccaggtggctacttgttcctt
tcaggggattgtcaggaggtcgccactctcactgtgaaatatcaagtgtcagaggaagta
ccatccggcacagtgatagggaagctgtctcaggaactgggccgggaggagaggtctggg
cgagcaggggctgccttccaggtcttgcagctgcctcaggcgctccccatccaggtggac
tccaaggacggcctgctcagcacagggaggcggctggaccgggagcagctttgccggcag
caggatccctgcctggtttcctttgacgtgcttgccacaggggatttggctctcatccac
gtggagatccaggtgctggacatcaacgaccaccagcctcagtttcccaaaggtgagcag
gagctggaaatctctgagagcgcctccctgcgcacccggatccccctggacagagctctg
gacccagacactggccccaacactctgcactcctacaccctgtctcccagcgagcatttt
gccctggatgtcattgtggggcccgatgagaccaaacacgcggaactcgtggtggtgaag
gagctggaccgggaaatccattcattttttgatctggtgttaactgcctatgacagtggg
aacccccccaagtcaggcaccagcttggtcaaggtcaatgtcctggactccaatgacaat
agccctgtgttcgctgagagctcactggcactggaaatccaagaagacgctgcccctggt
actctcctcataaacttgactgccacagaccctgatcaaggccccaacggggaggtggaa
tacttcctcagtaagcatgtgcctccagaggtgctggacaccttcagtattgatgccaag
acaggccaggtgattctgcgtcaacccctagactatgagaagaatcctgcctatgaggtg
gatgtccaggcgagggacctgggtcccaatcccatcccagcccactgcaaaattctcatc
aaggttctggacgtcaatgacaacaccccaaacatccacatcacgtgggcctcccaacca
tccctggtgtccgaagctcttcccaaggacagtttcattgctctcatcatggcaaatgac
ctagactcaggaaacaatggcctggtccactgttggctgagccaagagctgggccacttc
aggctgaagaggaccaatggcaacacatacatgctgctaaccaacgccacgctggacaga
gagcagtggccgcaatataccctcactcttttggcccaagaccaaggaccccagccctta
tcagtcaagaaacagctcagcattcagatcagtgatgccaacgacaacgcacctgtgttt
gagaaaagcaggtaccaggtctccactcgggaaaacaacctgccctctcttcacctcatt
accatcaaggcccatgatgcagatctgggcgttaatgggaaaatctcataccacatccag
gactctccagtttctcacttggtagctattgactcagacacaggcgaggtcaccgctcag
aggtcactggactatgaacagatggccggctttgagttcctggtgatcgcagaggacagg
gggcagccccagcttgcatccagtgtctctgtgtgggtcagcctgctggatgccaatgat
aatgtcccagaggtgattcaccccatactcagcgatgggaaagccagtctctcggtgctt
gtaaatgcctccacaggtcacctgctggtgcccattgaaactcccaatggcgtgggtcca
gcaggcactgacatgccaccacaggccacccccagctcccggccattccttttggtgacc
attgtagcaagagatgcagactcgggggcaaatggagagctcctctacagcattcagagc
gggaacgaagccggtctctttgtcctcagtccccacctggggcagctgttcatcaacatc
accaatgccagcagcctcactgggagtgagtgggagctggagatcgtggtggaagaccgg
ggcagcccctccttacagacccgggccctgttgagggtcttcttcgtcaccagtgtggac
cacttgagggactcagcccgtgagcctggggctctgagcacatcggtgctcacggtgatt
tgcctggtcgtattgctggccatctccgggttgatcttggctctgattatgtccatttgc
cggacagagaagaaggacaacagggcctacaactgtcgggaggccgagtccacctaccgt
caccagcccaagaggccccagaaacacatccagaaggcggacatccacctcgtgcctgtg
ctcaggggccaggtggatgagcctggcgaagctgggcagccccccaagcacgtgggcaag
gaagcgatgatggaagcaggctgggacccctgcctgcaggccccctttcatctcacaccg
accctgtacaggactctgcgtaaccaaggtaaccagggaacgctggccgagagccgagag
gtgctgcaggacactgtcaacctccttttcaaccatcccaggcagaggaatgcctcccgg
gagaacctgaaccttcccgagccccaacctgcgacgggccagccccgctcaaggcccctg
aaggttgcgggcagccccacagggagggtgcctggggaccagggcagtaaggaggccccg
ctgagcccgccggcctcctctgcaaccctgaggcggcagcggaatctccatggcaaagta
gcccctgagaaagagtcaggcccccgtcagatcctgcggagcctggtccggctgtctgtg
gctgcctttgcggagcggaaccccgtagaggagctcactgtggattcgcctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccggcggcagcaggagtgcaatcccagacacagat
ggcccaggtgccagggctggtggccaggcagaaccagatcaggaggaagggcccttggac
cctgaggaggacctctctgtgaagcagctgctagaagaagagctgtcgaacctgctggac
ccctacacaggcctcgccctggaccggctgagcgtccccgatccagcctggatggcaaga
ctctctttgcccctcgccaccaactaccgtgacaacgtgttctccccggacgctgcgacc
tcggaggagcccaggaccttccagacgttcggcaaggcgccggggcccgagctgagcccg
acgggcacgcggctggccagcaccttcctgtcggagatgagctcactgttggagatgctg
ctggagcagcgccccgccgtgccggtggaggccgcctccgaggtgctgcggcggctctca
gtctgcggaaggaccctgagtctagacctagccaccagcggggcctcgggctcggaaggc
cctgggggccgatctggaaagaagggggccgagggcaggaccagcagcggcagcagcagc
cgggacctgtggatccaggaaccaggggccccgggagatgttaggaagcccaggccctga
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