Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404457
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Entry
112404457 CDS
T08872
Symbol
PCDHB1
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-1
KO
K16494
protocadherin beta
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nasi04515
]
112404457 (PCDHB1)
Cell adhesion molecules [BR:
nasi04515
]
Cadherins
Protocadherins
112404457 (PCDHB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
112404457
NCBI-ProteinID:
XP_024608228
UniProt:
A0A341C1M7
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MAIARRKLLQSRQVASLLLFLCLSVGGTATIRYSVAEEMESASFVANVAKDLGLEVGKLA
ARGARLVSEGNKLHFRLHRKTGDLFEKEKLDRESLCGKADPCVLQFEIVLVEPLQSFRVE
VRVFDISDNAPVFLNKEPLLKIPESTPLGSQFPLQSAQDLDIGLNGLQNYTLSASEYFYL
HTHFRSHGPKYAKLVLDKPLDREEQPEVNLTITAVDGGSPPKSGTAHVRVEVLDVNDHVP
QFSRLVYRAQVLENSANGSLVATVTATDLDEGSNKEITYSLAQNPEVILQTFQIDSETGE
VRLRGSLDFEAVETYDIDIQATDGGGLSAHSKVLVEMVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVGLFSIRDQDIRVGGKITCFLKEDLPFAVKPTFRNSYSLVTDRGMDREEVSGYNI
TLVAMDTGPPTLSSETVIEVLISDINANPPVFQEDSYVLTVRENNSPAVFISKVHAEDLD
LGENAQIIYSLLPPKSGDLSVSAYISINSDNGKXYALRTMDYEAIQDFQFVVKATDGGFL
SLSSQVTVXVVVLDDNDNCPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLLYHLFKATDPGLFSAQQQNGEIRTLRQISERDPMMQKLIVLVQDHGQPALSTTASLN
ILLVDGFSEPYLQFRDPFKHPTRVNPSTKYLVISLAVLSFXFLLSVTVIFITHICQQIKY
REEFTIQEHFYDDCNFSNNLVQGGASGSISQPCPYEVSSATGTGNSEFWFLKRLMPNFPF
PHGTGEVKSEAGSSLPPDSDRNRSQGSEGHAQVSDDYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgcacgcagaaaactcttgcaaagcaggcaagtggcctcgcttctccttttt
ctgtgcttatctgtggggggtacggcgaccatccgctattcggtggcagaggagatggag
agtgcttcatttgtagctaacgtggctaaggacttggggctggaggtagggaagctggct
gcgcgcggggcgcggctcgtttccgagggcaataaactgcatttccggctgcaccgcaag
acaggagatctgttcgagaaggagaaactggatagggagtcactttgtggcaaagcagat
ccatgcgttctgcagtttgaaatagtcctggtggagccactgcagtcctttcgcgtggag
gtcagggtatttgatatcagtgacaatgccccggttttcctaaacaaggagcctctttta
aagattccggagagcacccccctgggttcacagtttcctctgcagagcgcgcaggatctg
gacatcggcctcaacggtctccaaaactacaccttgagcgccagtgagtatttctacctg
cacacccacttccgcagccatgggcccaagtatgccaagctagtgctggataaacccctg
gacagagaggagcagcctgaagtcaacctgacaattacagctgtggacggagggtctccg
cccaagtctggcactgcccacgttcgcgtggaggttctggatgtcaatgatcatgtgccc
caattctctcgactggtgtaccgtgctcaggtactggaaaacagtgccaatggttctttg
gtggctacagtaactgccaccgacctagacgagggctccaacaaggagataacttactct
ttagctcaaaacccagaagtaattctccagacgtttcagattgactctgaaactggagag
gttcgactaagagggtccctagattttgaagcagttgaaacatatgacattgacattcaa
gctaccgacggaggaggcctctctgcccacagcaaagtcctggtggagatggtggatgtt
aatgacaatcctcctgaagttacagtctcctctgtgtccagccctctccctgaggactct
ccactacagacggtagtgggccttttctctatcagagaccaggacattcgagtgggagga
aaaatcacttgcttcctcaaagaagaccttccctttgcagtcaaacctacattcaggaat
tcctactcactggtcactgacagaggcatggatcgggaggaggtctctggctataatatc
accctcgttgccatggatactggaccacccactctgtcgtcggagactgtaatagaggtg
ctaatatctgacattaatgccaatcccccagtatttcaggaagattcctacgtcttgact
gttcgagaaaacaacagccctgcagtttttattagcaaagtccatgctgaggatctagat
ttgggtgagaatgcccaaataatatattctctgctgcctccaaaaagtggagatctatca
gtctctgcttacatctccataaattcagacaatgggaaannctatgcactgagaactatg
gattatgaagccattcaagattttcagtttgtggtaaaggcaactgatgggggcttcctg
tcactgagtagccaggttactgtctgagtggttgtcctggatgacaatgataactgccca
atgatcttgtatccactgcaaaatggcaccttgccctgcaatgacctggtgcctaggtct
gcagaggcaggctacctggtgactaaggtggtggctgtggatggtgactcaggtcagaat
tcctggcttttatatcatctatttaaggccactgaccctgggttattctctgctcaacaa
caaaatggggaaatccgtacattgcggcagatatctgagagagaccccatgatgcagaaa
ctgatcgttcttgttcaggatcatggccaaccagctctttctactactgcctcacttaat
atcctcctggtagatggcttttctgagccctatctgcagttccgggatccattcaagcat
cctacaagggtaaatccatccactaagtatttggtcatttctctggctgtgctttccttt
nnctttctcctctctgtcacagtgatcttcattacacatatctgccagcagattaaatac
agagaagagttcacaattcaagagcatttctatgatgactgtaatttctctaacaacctg
gtacaaggaggagccagtggatccatatcccagccttgtccctatgaagtgtcctcagcc
actggcactggcaatagtgaattctggtttcttaagcgccttatgcccaacttccccttc
ccccatggcactggagaggtaaaatcagaggctggctccagtttaccaccagattctgat
aggaataggtctcaggggtcagagggtcatgcccaagtatctgatgactatatgtag
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