Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404602
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Entry
112404602 CDS
T08872
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03013
Nucleocytoplasmic transport
nasi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112404602 (UPF3A)
03015 mRNA surveillance pathway
112404602 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112404602 (UPF3A)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112404602 (UPF3A)
mRNA cycle factors
P-body specific factors
112404602 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
112404602
NCBI-ProteinID:
XP_024608409
UniProt:
A0A341C1M2
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
LSKVVIRRLPPSLTKEQLEQQLHPLPAHDYLGLFTADLSLYPHLYSRAYINFRNPDDILL
FRDRFDGYIFIDSKGLEYPAVVEFAPFQKTAKRKLKKKDTQAGSIEDDPEYKKFLETYCV
EEEKTSANPETLLGDIEAKTRELIARRTTPLLEYIKSRKLEKQRIREEKREERRRKELER
KCLREEEIRRRREEERCKRRAAEKQQKTAEKEVRRKLLKKSEKGEESSTEKPKERGEEID
TRDGKQELGPSCAVMKPKPLESSLQELREKSQNDSDKEQRDVERRFREKELEAQRYHLGD
SRKHRAHYELDKFSRRSKEELKRGKGFTPDRGKKGSQDGGGPVGAAETPGREKSEDELAP
KKEDTGSKDRPGLQLYQPRGGNRAHECDGRPPEEGRDRRRGEVEDSPGAGAEKSEEAE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ctcagcaaggtggtcatccggcggcttcctcccagcctcaccaaggagcagctggaacag
cagcttcacccccttcctgcacatgattacctcgggctctttactgctgatctcagtctt
tatcctcatctctattcaagagcatacattaattttagaaatcctgatgacatcctgctt
tttagagatcgttttgatggatatatcttcattgacagtaaaggcctagaatatcctgca
gtggtagagtttgctccattccagaagacagccaaaaggaagctaaagaaaaaagacacc
caagctggaagcattgaagatgatccagaatataagaagtttttagaaacttactgtgtg
gaggaggagaaaactagtgccaatcctgaaactcttctgggagacatagaggcaaagaca
agagaacttattgctagaagaaccacacctcttttggagtatattaaaagtagaaaatta
gaaaagcagagaattcgagaagaaaagcgagaagaacggaggaggaaggagttggaaagg
aagtgcttacgggaagaagagataagaaggagaagggaagaggagagatgtaagaggaga
gcagcagaaaaacagcagaaaactgctgagaaagaagtaaggaggaagcttctcaagaaa
tcagaaaagggagaggagtcaagcactgagaagccaaaagaaagaggagaggaaattgac
accagagatgggaaacaggaactcggtcccagctgtgcagtcatgaagcccaagcccttg
gagagctcgctgcaggagctcagggaaaagtcacaaaatgacagtgataaagagcaaagg
gacgtggagagaagattccgagaaaaagagcttgaagcacaaagataccacttgggtgac
agcagaaaacatagagctcactatgagttggataagttttcaagaagaagcaaagaagag
ctgaaaagggggaaaggattcaccccagaccgagggaagaaggggagccaggatgggggc
ggccctgtgggggcagcagagacaccaggaagggagaagagcgaagatgagctggcaccc
aagaaggaggacacgggaagcaaggaccgaccaggcttgcagctgtaccagcccagaggt
ggcaaccgagcccatgaatgtgatggaagaccccctgaggagggccgtgacaggaggagg
ggtgaggtggaagattcaccaggggctggagctgagaagagcgaagaggcagagtga
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