Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404684
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Entry
112404684 CDS
T08872
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nasi01002
]
112404684 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nasi04121
]
112404684 (USP40)
Enzymes [BR:
nasi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112404684 (USP40)
Peptidases and inhibitors [BR:
nasi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112404684 (USP40)
Ubiquitin system [BR:
nasi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112404684 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF7725
WH_Egal
Motif
Other DBs
NCBI-GeneID:
112404684
NCBI-ProteinID:
XP_024608532
UniProt:
A0A341C3P5
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MFGDLFEEDYSSMSNDHYGKGKKLKTKALEPPAPREFTNLSGIRNQGGTCYLNSLLQTLH
FTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDS
FGWTSDEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTIVNQIVCKECKNVSE
KQEDFLDLTVAVRNVSGLEDALWNMYVEEEVFDYDNLYHCGTCDRLVKAAKSAKLRKLPP
FLTFSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYMYDLFSVIIHKGG
CYGGHYHVYIKDVDHLGNWQFQEDKSNPDVNLEDLQNEEEIDDPLMILKAVLLQEESNLI
PVDQLGQKLLKKIGISWNKKYRKQYGPLRKFLQLHSQIFLLSSDESTVSLLKDSSLQAES
DIRRNDQQLLKTLTSEPPGLNDRPSCPHWFDINDSKVQPIKEKDIEQQFQGKESAYMLFY
RKSQLQRPPEARANPRYRVPCHLLNEMDAANTELQIQRAECDSTNNNFELRLHLGPHYHF
FNGALHPVVSQTESMWDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSVAKFVPAGLHVYQ
TLDGDHLTLCEIEIADGEDIFVWNGVEVGGIQIPAGRDCEPLLLNVLHPATSSEEEQCQR
LIDSPYVFPSNAEIGSVFTACAIPDGVILVNSAESVGEESWTTIPKEDLKKTFREQGLRN
GSSLLIQSSNDGDSLLTKRGKWITSVNEVDWLQVKNLCQLDSEGEQVKISATLNTVVFDI
RIKAIKELKLMKELAEDSCLRPIDRNGKLLCPVPDNYTLKEAELKMGSSLGLCPGKAPTS
SQLFLFFAVGSDVQPGTEMEIIVEETISVRDCLKVMLEKSGLSGDAWHLRKMDWCYEAGE
ALCEEDAALKELMLSSGDTLLLIEGKLPPLGLLKVPVWWYQPRGPLHRWKSHQDQTNCTF
SQGGVWRANSIQDAPSDVHAEVSLRYLGDVEISEDATLGELKSQAMTLPSFLEFSIPSPA
FLRAWTVESRRPGRLLRVHCQRLREYKLGQRTEICLEPLQKEENLGPQHVLLRTQMRLPG
KRAYALPVDLVWDTARGWTAGSLRHQVADFYSLPVEKIEIAKYLPEKFEWLPVPSWNQQI
TKRKKKKKQDNLQGAPYHLKDGDTIGIKNLLADDDDDFSTVRDDIGREKQKAFALGKNKS
QEALRVRSGDVPSGAETPARPRGPEASLSIHVGSFR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggacctgtttgaagaggattattccagtatgtcaaatgatcattatggaaaa
gggaagaaattaaagaccaaagctttggagccaccagcgcctagggaattcaccaattta
agtggaatcagaaatcagggtggaacctgttacctcaactcccttcttcagactcttcat
ttcacacctgaattcagagaagctttattttctcttggcccggaagagcttggttcgtta
gaggataaggataaacctgacgcaaaggtccgaatcatacctttgcagttacagcggttg
tttgcacagcttctgctcttagaccaggaagctgcgtccaccgcagacctcactgacagc
tttgggtggaccagtgatgaggaaatgaggcaacatgatgtacaggaactgaatcgaatt
ctctttagtgctttggaaacttctttagttgggacctccggccatgacctcatcaatcgt
ctatatcacggaaccattgttaaccagattgtttgtaaagaatgtaagaatgtcagtgaa
aagcaggaagacttcttagatctcacagtagcggtcagaaatgtatcaggtttggaagat
gcactctggaacatgtatgtggaagaggaagtttttgactacgacaacttgtaccactgt
gggacttgtgacaggctggttaaagcagcaaagtcggccaaattgcgtaagctgcctccc
tttcttactttttcattattaagatttaattttgattttgtgaagtgtgaacgatacaag
gaaacaagctgttatacgttccctctccggatcaatctcaagccattttgtgaacagagt
gaattagatgacttggaatatatgtatgacctcttctcagttattatacacaaaggtggt
tgctacggaggccattatcatgtgtatattaaagatgtagatcatttgggaaactggcag
tttcaagaggacaaaagtaatccagatgtgaatttggaagatcttcaaaatgaagaagag
attgatgatccattgatgattctaaaagcagtcttgttacaggaggagagtaatctaatt
cctgttgatcagctgggccagaaactcttgaaaaagataggaatatcttggaataagaag
tacagaaaacagtatggaccactgcgaaagtttttacagcttcattctcagatatttctg
ctcagttcagatgaaagtacagttagtctgttgaaggactcttctctccaggctgagtct
gatatacgaagaaatgatcaacaacttttgaagacacttacttcagaacccccaggatta
aatgatagaccctcctgtccccactggtttgatataaacgattccaaagtccagccaatt
aaggaaaaggatattgaacagcaatttcagggtaaagaaagtgcctacatgttgttttat
cggaaatcccagttgcagagaccccctgaagctcgagctaacccaagatacagggttcca
tgtcatttgctgaatgaaatggatgcagccaacactgaactacaaatacaaagggcagag
tgtgattctacaaacaataattttgaattgcgtctccacctcggccctcattatcatttc
ttcaatggggctctgcacccagtagtctctcaaacagaaagcatgtgggatttgaccttt
gataaaagaaaaactttaggagatcttcggcaatcaatatttcagctgttagaattttgg
gaaggagatatggttcttagtgttgcaaagtttgtaccagcaggacttcatgtttaccag
acacttgatggagatcacctgacactgtgtgaaattgaaattgctgacggggaagacatc
tttgtatggaatggggtggaggttggcggaatccagattccagctggtagagactgtgaa
cctctgcttttaaatgttcttcatccggcgacaagcagtgaagaagagcagtgtcagcgg
ttgatagactctccatatgtctttccatctaatgcagaaataggtagtgtattcacagcc
tgtgcaatcccagacggagtcatcttagtcaacagtgctgagtctgtaggtgaagagagc
tggaccaccattcccaaggaagacttgaagaagaccttcagagagcaaggtctcagaaat
ggaagctcacttttaattcagagttctaatgatggtgacagtttgttgaccaaacgaggg
aagtggatcaccagtgtgaatgaggttgactggctccaagttaaaaatttatgccaatta
gactctgaaggagaacaagttaaaatatcagcaactcttaacacagtggtgtttgatatt
cgaattaaagccataaaggaattaaaattaatgaaggaactagccgaggacagctgtttg
aggcctattgatagaaacgggaagcttctttgtccagtgccagacaattatactttgaag
gaagcagaattgaagatggggagttcattgggactgtgtcctggaaaagcaccaacttct
tctcagctgttcctgtttttcgctgtggggagcgatgttcagcctgggacagagatggag
atcatagtagaagaaacaatatctgtgagagattgtttaaaggtaatgctggagaaatct
ggcctctcaggagacgcatggcatttacgaaaaatggattggtgctatgaagctggggag
gctttatgtgaagaagatgcagcactgaaagagcttatgctctcttctggagacactttg
cttttaattgaaggaaaacttcctcctctgggtctcctgaaggtgcccgtctggtggtac
cagccacggggtcccttgcatcgctggaagagtcatcaggaccagacaaactgtaccttt
tctcaaggcggggtctggagagctaattccatccaagatgctcccagtgacgtgcatgca
gaagtttccctccgctacttgggagacgttgaaatctcagaagatgctacgttgggggag
ctgaagtctcaggccatgaccttgccctccttcttggagttttccatcccatcgcctgcc
ttccttagagcctggacggtggaaagtaggcgccccggcaggctcttaagagtccactgt
cagcggctcagggaatataaattgggacagagaactgagatctgcttagagccccttcag
aaagaagaaaacttgggcccccagcacgtgctgctgaggacacagatgcgcctccctggc
aagagggcgtatgccttgcccgtggacttggtgtgggacactgcccgaggctggacggcc
ggctccctgaggcaccaagtggccgatttctattctcttcctgtggagaaaattgaaatt
gccaaataccttcctgaaaagtttgagtggcttccagtacctagctggaaccagcaaatt
accaagaggaaaaagaagaaaaagcaagataatttgcagggggcgccttatcacttgaaa
gatggagatactattggcattaagaatctcctggctgacgatgatgatgatttcagcaca
gtcagagatgacattggaagagaaaaacagaaagcgtttgctctggggaaaaacaagagc
caggaagcccttcgtgtgcggagtggcgacgtcccctctggtgcagagacgcctgcccgc
ccccgtggaccagaagcttctctctccatccacgtcgggagcttcagatag
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integrated database retrieval system
