Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404705
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Entry
112404705 CDS
T08872
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nasi03037
]
112404705 (IFT88)
Cilium and associated proteins [BR:
nasi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
112404705 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_7
TPR_8
TPR_19
TPR_6
TPR_14
TPR_16
ANAPC3
TPR_11
TPR_10
TPR_CcmH_CycH
ARM_TT21_4th
TPR_17
ARM_TT21_5th
TPR_21
TPR-S
ARM_TT21_N
ARM_TT21_C
RPN7
HAT_PRP39_C
HEAT_Nup120
TPR_15
ARM_TT21_2nd
Coatomer_E
DUF6584
Motif
Other DBs
NCBI-GeneID:
112404705
NCBI-ProteinID:
XP_024608598
UniProt:
A0A341C2M5
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMENVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQQAVKTSHGRRPPITAKIPSTA
VARPVATGCGSKTSLASSMGRPVTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSR
GPAPPLEARNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTSPENINLDLTYSVLFNLASQYSANEMYPEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMR
MAPSLKAGFNLILSYFAVGDREKMKKAFQKLIAVPLETDEDGKYISPNDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAIMYLRQKDFNQAVETLKMFEKKDSSVKSAAATNLSFLYYLENEFSQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
CFLKLHAILRNSAQVLYQIANIYELMEDPNQAMEWLMQLISVVPTDSRALSKLGGLYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEIREQRTKSGRDGSGGLRGRRDGSAGSDGGQNCGAGSRGERLSAQLRALPRMEEPYDSS
SNKELDASYVDPLGPQIERPRTAARKRVDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatgtacacctggccccagagacagatgaagatgatctttattctggttat
aatgactacaatccaacctatgataccgaggaattggagaatgacacagcttttcagcaa
gctgtgaaaactagtcacggcagaagacctccaataactgctaaaataccaagcacagca
gttgctagacctgtagctactggatgtgggtccaagacatccctggcatcgtcaatggga
agaccagtgacaggggctattcaggatggagttactagacccatgacagcagtgagagca
gctggttttaccaaagcagctttgagaggctctgcgttcgaccccctcggtcagtcgcgg
ggccctgcaccgcccctggaggccaggaacgaagacagtccagaagaaaagataagacaa
ttagagaagaaagtaaatgagttggtagaagaaagctgtattgctaacagttgtggagac
ttaaaattggccttagaaaaggcaaaagatgcaggaagaaaagagagagtcctggtgaga
caacgagaacaagttacaagtccagaaaacatcaatttggatttaacttactcagttctt
ttcaacttggccagtcagtattcagctaatgaaatgtatcctgaagcactaaacacctat
caagttatagtgaaaaataagatgtttagcaatgcaggacggttgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcctta
gatcaaattccaagtgtccataaagaaatgaggattaaaattatgcagaacattggagtt
acatttattaaaactgggcagtattcagatgccattaattcatttgagcacataatgagg
atggcaccaagcctgaaggcaggcttcaacctgattcttagttactttgctgttggagat
cgagaaaaaatgaagaaggcattccaaaagctgattgctgtcccattagaaactgatgaa
gatggtaaatacatttcaccaaatgatgacccacatactaatttagtgattgaagctata
aaaaatgatcatctaaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacggctgcaaaactcattgctcctgtaattgaaacatcttttgctgtaggttatgat
tggtgtgttgaagttgtgaaagcttctcagtacgtagagctggcaaatgatctggaaata
aacaaagcaattatgtacctgagacaaaaggactttaatcaagctgtagagaccttaaaa
atgtttgaaaaaaaggacagtagtgtgaagagtgcggctgcaaccaacctctcattcctg
tattatttggagaatgaattctcacaagccagtagctatgcagatttagctgtgaactct
gacagatataacccgtcagctcttactaataaagggaatacagtttttgcaaatggtgac
tatgagaaggcagctgaattctataaagaggctctaagaaatgattcttcttgtactgaa
gcactttataacattggccttacctataagaagctaaaccggcttgatgaagctttggac
tgtttcctgaaacttcatgcaatcctaagaaacagcgcccaagtcctttaccagatagca
aatatatacgagttaatggaagatcccaatcaagctatggaatggttaatgcagctgatc
agtgttgttccaactgactccagagctttgtctaaactgggaggattatatgacagtgag
ggagataaatcccaagcattccaatattactatgagtcgtataggtatttcccgtccaat
attgaagtcatcgagtggcttggggcctattacatcgacacccagttttgtgaaaaagcc
attcagtactttgaaagagcttctcttatacagcctacacaagtgaaatggcagctgatg
gtagctagttgttttagaagaagtggtaactaccaaaaagcattagatacttacaaagat
attcacagaaaatttccagaaaatgttgaatgtctacgtttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgcaacaaaactcaagagattggaaaaaatg
aaagaaatcagggagcagcgcaccaagtccggcagggacggcagcgggggtctccgcggc
aggagagacgggagtgctggcagtgacggcggccagaactgtggtgccggtagcagaggc
gagcggctcagcgcccagctccgagccctgcccaggatggaggagccttacgacagcagc
agtaacaaggagctagacgcctcctatgtggatccgcttggcccgcaaatagaaagaccc
agaactgcagccagaaagagagtcgacgaggatgattttgctgatgaagaattaggagat
gatttgcttccagaataa
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