Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404822
Help
Entry
112404822 CDS
T08872
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03440
Homologous recombination
nasi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112404822 (TOP3A)
03460 Fanconi anemia pathway
112404822 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nasi03032
]
112404822 (TOP3A)
03400 DNA repair and recombination proteins [BR:
nasi03400
]
112404822 (TOP3A)
Enzymes [BR:
nasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112404822 (TOP3A)
DNA replication proteins [BR:
nasi03032
]
Eukaryotic type
DNA Topoisomerases
112404822 (TOP3A)
DNA repair and recombination proteins [BR:
nasi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
112404822 (TOP3A)
FA (Fanconi anemia) pathway
112404822 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
112404822
NCBI-ProteinID:
XP_024608701
UniProt:
A0A341C1J7
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MIFPVVRRALRWLPRPGSRALTLADMEVALRGVRKILCVAEKNDAAKGIADLLSGGRMRR
REGLSRFNKIYEFDYRLRGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFLDIKKTLEREARQCQVLVIWTDCDREGENIGFEIIHVCKAVKPSLQVLRARFSE
ITARAVQAACENLMEPDRRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPETFHKIRVTHDHRDGAVEFSWKRHRLFNHTACLVLY
QLCMEDPRATVVEVRSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLDLTALVEEQTHDPRWGPFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYADSLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLVILARNYLDV
YPYDRWSEKTLPVYSRGSCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKLVVLQQQVQKYKQVFIEAMAKAQRLDEALSQYFGAGVELAQQEAIFPAVPEPVRKCPQ
CGKDMVLKTRKSGGFYLSCTGFPECRSAVWFPDSVLEASRDGSVCPVCQPHPVYRRRLKF
KFKRGSLPPTMPLEFVGCVGGCDETLREILDLRFSRGPARAGQTVSQPSGHLQASQPLDR
MGSSQHGHPQPALARTAPLPAAEGEGNSVTCNCGREALLLTVRKEGPNQGRQFYKCSGGG
CSFFLWADSGHPEAGGPPSEAPRPPGGSLGRPPGSGKPLGGPGSPGDGGGGACCLCSQPA
VTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWVDENVAPARVGAPWMGVGRTAARRWVKV
NDAPEGTWPLQDTQKPGHASEGAWRELSLGAHLYHLEPLGAASQPVSSGPLEAPPGQEPE
EEAGGRRPEAKGPGLVPRTPGLRPRNPGSAAFATSLDTRVPSVLRTDEGRVGPRGPLPPP
AAFVSGNELFLQGSFEESGCSWSVTCVLRSPGPDRSLKKATPGG
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccctgtcgtccgccgcgcgctccgctggctgccgcggcctgggagccgggcg
ctgaccctcgccgacatggaggtggccctgcgaggcgtgcggaagatcctctgcgtggcc
gagaagaacgacgcggccaagggcatcgcggacctgttgtccggcggccgcatgcggcgg
agagaaggactttccagattcaacaagatctatgaatttgattatcgtctgcgtggccag
aatgtcaccatgataatgacttcagtctcgggacacttgctggctcatgatttccagatg
cagtttcgcaagtggcagagctgcaatcctcttgtcctctttgaagcagaaattgaaaag
tactgcccagagaattttttagacatcaagaaaactctggagcgagaggctcggcagtgc
caggtgctggtgatctggaccgactgtgacagagaaggtgaaaacatcgggtttgagatc
atccacgtgtgcaaggctgtgaagcccagcctacaggtgctgcgagcccgtttctccgag
atcaccgcccgcgctgtccaggcggcctgtgaaaacctgatggagcccgaccgcagagtg
agcgacgccgtggacgtgaggcaggagctggacctgcggatcggggctgccttcaccagg
ttccagaccctgcggctgcagaagatctttcctgaggtgttggcggagcagctgatcagt
tatggcagctgccagttccccaccctggggttcgtggtggagaggttcaaagccattcag
gcgtttgtgccagaaaccttccacaaaatcagagtgacccacgaccacagggatggcgca
gtggagttcagctggaaaaggcatcggcttttcaaccacacggcttgtcttgtcctctat
cagctgtgcatggaggatcccagggcgaccgtggtggaggtcaggtccaaggcaaaaagc
aagtggaggcctcaagctttggacactgtggagcttgagaagttggcttctcgaaagttg
aggataaatgctaaagaaaccatgaggattgctgaaaagctctacactcaagggtacatc
agctatccccgaactgaaacaaacattttccccaaagacttagacctgaccgcgctggtg
gaggaacagacccacgatccacgctgggggcccttcgcccagagcattctagagcggggc
ggccccactccacgcaacgggaacaagtctgaccaagctcaccctcccatccaccccacc
aagtacgcggacagcctgcagggggacgagcagcgactgtacgagctcatcgtccgccac
ttcctggcctgctgctcccaggatgcccagggccaggagaccaccgtggagatcgacatc
gcgcaggagcgcttcgtggcccacggcctcgtaatcctggcccgaaactatctggacgtg
tacccctacgatcgctggagtgaaaagaccctccccgtctacagtcgaggctcctgcttt
cagcccagcaccgtggagatggtggacggggagaccagtccaccccagctgctcactgag
gccgaccttatcgccctcatggagaagcacggcatcggtaccgacgcgacgcacgcggag
cacatcgagaccatcaaggcccggatgtacgtcgggctcacgccagacaagcgctttctc
cccgggcacctgggcatggggcttgtggaaggctatgactccatgggctacgagatgtcc
aagcctgacctgcgggccgagctggaggctgacctgaagctcatctgcgaggggaagaag
gacaagctcgtggtcctgcagcagcaggtgcagaagtacaagcaggtcttcatcgaagcc
atggccaaagcccagaggttggacgaggccttgtcccagtactttggggcaggggtggag
ctggcccagcaagaagccatcttcccagctgtgccagagcccgtcaggaagtgcccacag
tgcggcaaggacatggtcctcaagaccaggaagagcggcgggttctacctcagctgcacg
gggttcccggaatgtcgctcggccgtgtggttcccggacagtgtgctggaggccagcagg
gacgggagcgtgtgtccagtgtgtcagccacaccccgtttacaggagacggttgaagttc
aagtttaagcgaggcagccttcccccaaccatgccactggaatttgtcggctgcgttggt
ggatgtgacgagaccctgagggagatcttggacctcaggttttcacgggggcccgcccga
gctggccagacggtcagccagccctccggccacctgcaggccagccagcccctggacaga
atgggcagcagccagcacggccacccccagccggctctggccaggactgcgcccctgccc
gccgccgagggcgaaggcaactccgtgacctgcaactgtggccgggaggccctgctgctc
accgtccggaaggaggggcccaaccagggccgtcagttctacaagtgcagcggcggcggc
tgcagcttcttcctctgggccgacagcggccacccagaagcaggggggcctccctccgag
gcgcccagacccccgggcggctcactgggacgcccgccgggctcagggaagcccctgggc
gggcccggaagccccggcgatggtggcggtggcgcgtgctgcctgtgcagccagcccgct
gtcacgcgcactgtgcagaaggacgggcccaacaaggggcgccagttccacacgtgcgcc
aagccccgggagcagcagtgcggcttcttccagtgggtggacgagaacgtggccccagct
agggttggcgccccatggatgggtgtggggaggaccgctgccagacgctgggtcaaggta
aatgacgcacctgaaggcacctggcccctccaggacacgcagaagcctggtcacgcatct
gagggagcctggcgggagctttctcttggggcccacctgtatcaccttgaaccacttggt
gcggcttctcagcctgtttcctccggacctttggaggccccccctgggcaggagccagag
gaggaagccgggggccggaggccagaagcaaaagggcccgggctggttcctcggacaccg
ggtctgcggccaagaaaccccggaagtgcagcctttgccaccagcctggacacacgcgtc
ccttctgtcctcagaacagatgagggcagggtaggaccaagggggccactgcctccacct
gctgcttttgtctcgggaaacgagctgtttctccagggcagctttgaggaaagtggctgc
tcttggagtgtgacctgtgttctcaggagtccgggtccagaccgctctctcaagaaggcc
acgcctggtggatag
DBGET
integrated database retrieval system
