Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112404890
Help
Entry
112404890 CDS
T08872
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nasi01009
]
112404890 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nasi04131
]
112404890 (VPS54)
Protein phosphatases and associated proteins [BR:
nasi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112404890 (VPS54)
Membrane trafficking [BR:
nasi04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
112404890 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
112404890
NCBI-ProteinID:
XP_024608814
UniProt:
A0A341C2U9
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTGDSNSLCVAPSLVTD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
QQEISQREKIHERCKKICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINK
VSQIEDIDTDVVLKLADQMRMLNFLQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL
DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFSESELTPIAIDTTSQRNA
SPNSEPCSSDSVSEPECTTDSSSSKEQTSSSVTPGAVDIMVNEDMKLTDLELGKLANNVQ
ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSTEFITLSRLMETFILETEQICGRKSMSL
LGALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSIADGKIALPEKKS
GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMAEIWEQKSNSKLIKQAAYSKTSMEELENVIDS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagacccgacaaaacacattcgacctgtgcagtcactgccagatgtgtgt
cccaaggaacccacaggtgattcaaatagtttatgtgttgccccatctctagttacagat
caacatagatggactatatatcattccaaagtaaatctcccagcagcattaaatgatcct
agattagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggac
actgaagtcataccttcattctacctcccacagatcagcaaggaacattttacagtatat
caacaggaaatctctcagagagagaagattcatgagagatgcaagaaaatttgtcctcct
aaagatacctttgacaggactctcttacatactcatgataaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggacgattccttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagct
tcctcaaagttgctacaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatctctctacgttcagaagcattttttcatgcaatgacctctcaacacgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaaaatgcttcgagataaaattgca
cagattgataaagtaatgtgtgaaggatcactacacattttaagactggcacttaccaga
aataattgtgttaaagtatacaataaactgaaattaatggccactgtacaccagactcag
cctacagtacaggtgttgttatctacttctgaatttgtcggagcattggacttaatagca
acaacgcaagaggttctacagcaggaacttcagggcattcacagcttccggcatttggga
tcacagctttgtgaattagaaaaactgatagataaaatgatgattgcagaattttctact
tattctcacagtgacttaaatagaccattggaagatgactgtcaaattttagaagaggaa
agactagtatctcttgtatttggacttttaaaacaaagaaaacttaattttttagaaata
tatagtgaagaaatgattattacagcaaagaatatcattaaacagtgtgtgattaataaa
gtttcacaaatagaagacatagacacagatgttgtcttgaagcttgcagatcagatgaga
atgttgaattttcttcagtggtttgatctgctaaaggatattttctctaagtttacaatt
ttcctacagagagttaaggcaacgttaaatatcattcacagtgttgttctctcagttctt
gacaaaaaccaaaggactagagaattggaggagatttcgcagcagaagaatgctgcaaaa
gacaattcactggacacagaggtggcttatttaatccatgaaggcatgtttataagcgat
gcattcagtgagagtgaattaacacctatagcaattgacactacctctcaaagaaatgca
tctccaaatagtgagccctgcagcagtgattcggtatccgaaccagaatgtactactgat
tcttcatccagcaaagagcagacatcatcatcggttactccaggagctgtggatattatg
gtcaatgaagacatgaaattaactgacttagagctgggaaagctggcaaataatgtccag
gagttattatatagtgcctcagatatatgccatgatcgagctgtcaaatttctcatgtca
agagcaaaggatggttttcttgagaagctgaattccacagaattcataacactttccaga
ttaatggaaacattcattttagaaactgaacagatctgtggaagaaaaagcatgtcatta
cttggagcacttcagagccaagctaataaatttgtaaacaggtttcatgaagagagaaaa
accaagctcagcctcctcttagacaatgaacgctggaagcaagctgatgttcccgcagaa
tttcaggatcttgttgattctatagcagatggaaagattgctttacctgaaaaaaaatca
ggggctacagaagaaaggaaaccagctgaagttctcattgtcgagggacaacagtatgct
gttgttggaaccgtattgctgttgataagaattatccttgaatattgccagtgtgtggat
aatatcccatctgttactactgacatgctcactcgtctatcagatttattgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaa
acaataactacaaaaaatttggctctttcttcacgctgtttgcagttaatcgtgcactac
attcctgtgatcagggctcattttgaagctcgactgcagcctaagcagtatagtatgctt
aggcattttgatcatatcactaaggactaccatgaccacatagctgaaatatcagctaag
cttgtggcgataatggatagcttatttgacaagctgttatctaagtatgaagtgaaagct
cccgttccttctgcctgtttcaggaatatttgtaagcaaatggcaaaaatgcatgaagct
atatttgatctccttccagaagaacaaacacaaatgttatttttaagaattaatgcaagt
tacaaactccacttgaaaaagcaattgtctcacttaaatgtgataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggccttaaagatttggacctaaatatggccgagatctgggaacagaaaagtaacagtaaa
cttattaaacaggcagcttactcaaaaacaagtatggaagaattggaaaatgtaattgat
tcttag
DBGET
integrated database retrieval system
