KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112405399
Entry
112405399         CDS       T08872                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nasi03041]
    112405399 (SMU1)
Spliceosome [BR:nasi03041]
 Complex B
  Other components
   Complex B specific factors
    112405399 (SMU1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Vps41 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_VPS8 Beta-prop_IP5PC_F TFIIIC_delta Beta-prop_DCAF12 DUF7165 VPS8_N KNTC1_N PROPPIN Beta-prop_NOL10_N LisH zf_topless
Other DBs
NCBI-GeneID: 112405399
NCBI-ProteinID: XP_024609537
UniProt: A0A341C6H8
LinkDB
Position
Unknown
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaattgagtcctccgatgtgatccgtcttatcatgcagtacctaaaggag
aacagtttacatcgggcattagccaccttgcaggaagagactactgtgtctctgaatact
gtggacagcattgagagttttgtggctgacattaatagcggccattgggacactgtttta
caggctatacaatctctgaaattgccagacaaaaccctcattgacctctatgaacaggtt
gttttggaattaatagagctccgtgaattgggtgctgccagatctcttctgagacagact
gatcccatgattatgttaaaacaaacacagccagaacggtatattcatctggaaaacctc
ttggccaggtcttatttcgatcctcgagaggcataccccgatggaagtagcaaagagaag
agaagagcagcgattgcccaggccttagctggggaagtcagcgtggtgcctccatctcgt
ctcatggcattgctgggtcaggcactgaagtggcagcagcaccagggattgcttcctcct
ggtatgactatagatttgttccgaggcaaagcagctgtcaaagatgtggaagaagaaaag
tttcctacgcagctgagcaggcatattaagtttggtcagaaatcacatgtggagtgtgct
cgattttctccagatggtcagtatctggttactgggtctgttgatggattcattgaagta
tggaattttacgactggaaaaatcaggaaggatcttaagtaccaggcccaggataacttt
atgatgatggatgatgctgtcctctgcatgtgcttcagcagagatacagaaatgttagca
actggtgcccaagatggaaaaatcaaggtatggaagattcagagtggacagtgtttaagg
agatttgaaagagcacacagtaaaggtgtcacctgtctaagcttttctaaggatagcagt
cagatccttagtgcctcatttgaccagacaattagaattcatggtttaaaatctggaaaa
accctgaaggaatttcgtggccattcctccttcgttaatgaagcaacatttacacaggat
gggcattatattattagtgcatcctctgatggcactgtgaagatctggaacatgaagacc
acagaatgttcaaatacctttaaatccttgggcagcactgcagggacagacatcactgtc
aacagtgtgatactgcttcctaaaaacccagagcactttgtggtttgcaacagatcaaac
acagtggtcatcatgaacatgcagggacagattgtcagaagcttcagctctggtaagaga
gaaggtggtgactttgtttgctgtgccctctctccccgtggtgaatggatctactgtgta
ggggaggactttgtgctctactgtttcagcacagtcactggcaaactggagagaactttg
acagttcatgagaaggatgtgattggtatcgcacatcaccctcatcagaacctgattgct
acttacagtgaagatggactcctaaaactctggaaaccctaa

DBGET integrated database retrieval system