Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112405407
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Entry
112405407 CDS
T08872
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi00260
Glycine, serine and threonine metabolism
nasi00630
Glyoxylate and dicarboxylate metabolism
nasi00670
One carbon pool by folate
nasi01100
Metabolic pathways
nasi01200
Carbon metabolism
nasi01230
Biosynthesis of amino acids
nasi01240
Biosynthesis of cofactors
nasi01523
Antifolate resistance
nasi04981
Folate transport and metabolism
Module
nasi_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
112405407 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112405407 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
112405407 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
112405407 (SHMT1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
112405407 (SHMT1)
Enzymes [BR:
nasi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
112405407 (SHMT1)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
112405407
NCBI-ProteinID:
XP_024609555
UniProt:
A0A341C3Y0
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All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MATPVNGAPVDANLWSSHEKMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRA
VLEALGSCLTNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDPQGWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTNKKKISATSIFFESMPYKVNPDTGY
INYDQLEENARLFHPKLIIAGTSCYSRNLDYARLREIADDNGAYLMADMAHISGLVAAGV
VPSPFEHCHVVSTTTHKTLRGCRAGMIFYRKGVRSVDPKTGRETRYNLESLINSAVFPGL
QGGPHNHAIAGVAVALKQAMTPEFRLYQRQVLANCRALAETLMGLGYKVVTGGSDNHLIL
VDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFKK
VAHFIHRGIELTLQIQDTVGVKATLKEFTEKLAGAEDHQRAVAALRAEVESFAALFPLPG
LPDF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccgtcaacggagcccccgtggatgccaacttgtggtcctcgcatgagaag
atgctggcgcagcccctgaaagatagcgacgtggaggtttacaacatcattaagaaggag
agtaaccggcagagggtcggcctggagctgatcgcctccgagaactttgccagccgggct
gttctggaggccctgggttcttgcctaaccaacaagtactccgaggggtacccgggccaa
aggtactacggcgggacggaattcatcgatgagctggaggtcctctgtcagaagcgagcg
ctgcaggtctatggcctggacccccagggctggggagtcaatgtccaaccctactcaggc
tcccccgcaaacttcgcggtgtacacagccctggtggagccccacggccgcatcatgggc
ctggacctgcccgacgggggccacctgacccatgggttcatgaccaacaagaagaagatc
tccgctacgtccatctttttcgaatctatgccctacaaggtgaaccccgacaccggctac
atcaactacgaccagctggaggagaatgcccgcctcttccacccgaagctcatcatcgca
gggaccagctgctactcccggaacctggactacgcccggctgcgtgagatcgctgacgac
aacggggcgtatctcatggccgacatggcacacatcagtgggctggtggcggccggcgtg
gtgccctcccccttcgagcactgccacgtggtgtccaccaccacccacaagaccctgcgg
ggctgccgcgccggcatgatcttctacaggaagggagtgcgcagcgtggacccgaagaca
ggcagagagactcgctacaacctggagtcactcatcaactctgccgtgttcccaggcctg
caagggggcccccacaaccacgccattgctggggtggcggtggctctgaagcaggccatg
actccggagttcagactctaccagcgccaggtgctggccaactgcagggctctggccgag
accttgatggggctgggctacaaagtggtcacaggtggttctgacaaccacttgatcctc
gtggacctccgctccaaaggcacagacggcggccgggctgagaaggtgctggaagcctgt
tccatcgcctgcaacaagaacacctgcccaggtgacaaaagcgccctgcggcccagcgga
ctgcgcctggggaccccggcgctgacatcccgaggactcttggaagaagatttcaaaaaa
gttgcccattttattcacagagggatagagctgaccctgcagatccaggacacggtgggg
gtgaaggctaccctgaaggagttcacggagaagctggcaggggccgaggatcaccagcgg
gctgtggcggcactcagggcggaggtggagagctttgccgccctcttccctctgcccggc
ctgcccgacttctag
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